Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra01G0147700 Salix brachista HOM05D005219 ORTHO05D006451 1.3e-91 339.7 171 100.0
Sabra19G0006900 Salix brachista HOM05D005219 ORTHO05D006451 7.5e-68 260.8 172 81.4
Potri.019G008541 Populus trichocarpa HOM05D005219 ORTHO05D006451 2.9e-67 258.8 172 78.5
Potri.004G138900 Populus trichocarpa HOM05D005219 ORTHO05D006451 2.4e-58 229.2 172 70.9
Cfa002238 Carpinus fangiana HOM05D005219 ORTHO05D006451 3.5e-49 198.7 172 59.9
Manes.13G076600 Manihot esculenta HOM05D005219 ORTHO05D006451 9.6e-47 190.7 172 59.3
Gohir.A05G376400 Gossypium hirsutum HOM05D005219 ORTHO05D006451 1.6e-46 189.9 111 80.2
Gohir.D04G039600 Gossypium hirsutum HOM05D005219 ORTHO05D006451 1.6e-46 189.9 111 80.2
Gorai.012G044600 Gossypium raimondii HOM05D005219 ORTHO05D006451 1.6e-46 189.9 111 80.2
CiPaw.03G253500 Carya illinoinensis HOM05D005219 ORTHO05D006451 3.6e-46 188.7 182 57.1
QL10p038974 Quercus lobata HOM05D005219 ORTHO05D006451 3.6e-46 188.7 171 57.3
CiPaw.04G179100 Carya illinoinensis HOM05D005219 ORTHO05D006451 4.7e-46 188.3 171 56.1
Duzib147G1025 Durio zibethinus HOM05D005219 ORTHO05D006451 6.8e-45 184.5 111 77.5
Thecc.01G233500 Theobroma cacao HOM05D005219 ORTHO05D006451 1.5e-44 183.3 111 78.4
Prupe.4G281500 Prunus persica HOM05D005219 ORTHO05D006451 2.0e-44 183.0 164 59.1
Haze_25419 Corylus avellana HOM05D005219 ORTHO05D006451 2.6e-44 182.6 162 59.3
Cpa.g.sc37.82 Carica papaya HOM05D005219 ORTHO05D006451 2.2e-43 179.5 167 58.1
Actinidia19951 Actinidia chinensis HOM05D005219 ORTHO05D006451 2.9e-43 179.1 171 53.8
Actinidia36586 Actinidia chinensis HOM05D005219 ORTHO05D004865 1.1e-42 177.2 171 53.2
CSS0003875 Camellia sinensis var. sinensis HOM05D005219 ORTHO05D006451 1.9e-42 176.4 172 54.1
CSS0004797 Camellia sinensis var. sinensis HOM05D005219 ORTHO05D006451 1.9e-42 176.4 172 54.1
AUR62036029 Chenopodium quinoa HOM05D005219 ORTHO05D006451 7.1e-42 174.5 108 73.1
Lalb_Chr13g0296831 Lupinus albus HOM05D005219 ORTHO05D006451 9.3e-42 174.1 169 52.1
Atru.chr4.1140 Acer truncatum HOM05D005219 ORTHO05D006451 1.2e-41 173.7 168 56.0
Atru.chr4.1215 Acer truncatum HOM05D005219 ORTHO05D006451 1.2e-41 173.7 168 56.0
FvH4_1g25450 Fragaria vesca HOM05D005219 ORTHO05D006451 1.2e-41 173.7 164 56.7
FAN19G1780 Fragaria x ananassa HOM05D005219 ORTHO05D006451 1.2e-41 173.7 164 56.7
arahy.Tifrunner.gnm1.ann1.4364K7 Arachis hypogaea HOM05D005219 ORTHO05D006451 2.1e-41 172.9 164 55.5
arahy.Tifrunner.gnm1.ann1.9Z2GEU Arachis hypogaea HOM05D005219 ORTHO05D006451 2.1e-41 172.9 164 55.5
FAN23G1877 Fragaria x ananassa HOM05D005219 ORTHO05D006451 2.7e-41 172.6 164 56.7
FAN28G0381 Fragaria x ananassa HOM05D005219 ORTHO05D006451 2.7e-41 172.6 164 56.7
Lalb_Chr12g0202821 Lupinus albus HOM05D005219 ORTHO05D006451 2.7e-41 172.6 112 70.5
MD15G1138200 Malus domestica HOM05D005219 ORTHO05D006451 7.8e-41 171.0 172 52.9
CsaV3_2G019800 Cucumis sativus L. HOM05D005219 ORTHO05D006451 1.0e-40 170.6 112 69.6
TAR381G1173 Trochodendron aralioides HOM05D005219 ORTHO05D006451 1.0e-40 170.6 174 53.4
Psat7g041880 Pisum sativum HOM05D005219 ORTHO05D006451 1.3e-40 170.2 164 54.3
AUR62004810 Chenopodium quinoa HOM05D005219 ORTHO05D006451 2.3e-40 169.5 108 71.3
Sed0017542 Sechium edule HOM05D005219 ORTHO05D006451 2.3e-40 169.5 111 72.1
ClCG02G000120 Citrullus lanatus HOM05D005219 ORTHO05D006451 3.0e-40 169.1 111 71.2
MELO3C023202.2 Cucumis melo HOM05D005219 ORTHO05D006451 3.0e-40 169.1 112 69.6
PGR142G2743 Punica granatum HOM05D005219 ORTHO05D006451 3.0e-40 169.1 112 69.6
Ciclev10025072m.g Citrus clementina HOM05D005219 ORTHO05D006451 3.9e-40 168.7 172 52.9
EL10Ac4g08973 Beta vulgaris HOM05D005219 ORTHO05D006451 2.5e-39 166.0 108 70.4
CDE08G1591 Ceratophyllum demersum HOM05D005219 ORTHO05D006451 2.5e-39 166.0 111 68.5
FAN26G1898 Fragaria x ananassa HOM05D005219 ORTHO05D006451 2.5e-39 166.0 164 54.9
Cc00_g05550 Coffea canephora HOM05D005219 ORTHO05D006451 4.3e-39 165.2 111 71.2
Medtr8g095210 Medicago truncatula HOM05D005219 ORTHO05D006451 4.3e-39 165.2 169 53.8
GSVIVG01022419001 Vitis vinifera HOM05D005219 ORTHO05D006451 4.3e-39 165.2 176 51.7
RcHm_v2.0_Chr2g0123471 Rosa chinensis HOM05D005219 ORTHO05D006451 5.6e-39 164.9 173 53.8
Eucgr.I00008 Eucalyptus grandis HOM05D005219 ORTHO05D006451 7.3e-39 164.5 112 72.3
TPR.G12784 Trifolium pratense HOM05D005219 ORTHO05D006451 1.3e-38 163.7 169 52.7
CDE06G1179 Ceratophyllum demersum HOM05D005219 ORTHO05D006451 1.6e-38 163.3 111 67.6
Nn1g08341 Nelumbo nucifera HOM05D005219 ORTHO05D006451 1.6e-38 163.3 110 70.0
CANSAT54G2070 Cannabis sativa HOM05D005219 ORTHO05D006451 4.8e-38 161.8 171 49.1
Phvul.002G277800 Phaseolus vulgaris HOM05D005219 ORTHO05D006451 6.2e-38 161.4 111 69.4
Hund06895 Selenicereus undatus HOM05D005219 ORTHO05D006451 8.1e-38 161.0 108 68.5
Carub.0006s0762 Capsella rubella HOM05D005219 ORTHO05D006451 1.1e-37 160.6 164 50.6
Phvul.009G157400 Phaseolus vulgaris HOM05D005219 ORTHO05D006451 1.1e-37 160.6 112 68.8
AL6G19360 Arabidopsis lyrata HOM05D005219 ORTHO05D006451 1.8e-37 159.8 159 52.2
Glyma.06G159700 Glycine max HOM05D005219 ORTHO05D006451 1.8e-37 159.8 112 65.2
PSO782G1219 Papaver somniferum HOM05D005219 ORTHO05D006451 1.8e-37 159.8 122 64.8
CARHR204350 Cardamine hirsuta HOM05D005219 ORTHO05D006451 2.4e-37 159.5 159 52.2
PSO170G0098 Papaver somniferum HOM05D005219 ORTHO05D006451 5.3e-37 158.3 122 63.9
A03p04030 Brassica napus HOM05D005219 ORTHO05D006451 6.9e-37 157.9 111 65.8
BraA03t09746Z Brassica rapa HOM05D005219 ORTHO05D006451 6.9e-37 157.9 111 65.8
TWI75G0018 Tripterygium wilfordii HOM05D005219 ORTHO05D006451 6.9e-37 157.9 156 54.5
Thhalv10012814m.g Eutrema salsugineum HOM05D005219 ORTHO05D006451 9.0e-37 157.5 148 54.1
Ca_17595_v3 Cicer arietinum L. HOM05D005219 ORTHO05D006451 1.2e-36 157.1 165 52.1
AT5G08630 Arabidopsis thaliana HOM05D005219 ORTHO05D006451 1.5e-36 156.8 159 51.6
VMungo1309G1202 Vigna mungo HOM05D005219 ORTHO05D006451 1.5e-36 156.8 112 65.2
THA.LOC104818408 Tarenaya hassleriana HOM05D005219 ORTHO05D006451 2.0e-36 156.4 173 48.0
Sp6g34250 Schrenkiella parvula HOM05D005219 ORTHO05D006451 4.4e-36 155.2 111 64.9
Lj4C816G5 Lonicera japonica HOM05D005219 ORTHO05D006451 5.8e-36 154.8 166 51.2
Oeu011013.3 Olea europaea HOM05D005219 ORTHO05D006451 1.3e-35 153.7 173 50.3
BcaB01g05651 Brassica carinata HOM05D005219 ORTHO05D006451 2.9e-35 152.5 111 64.0
Lj4g0026114 Lotus japonicus HOM05D005219 ORTHO05D006451 3.8e-35 152.1 173 49.1
Nitab4.5_0002704g0040 Nicotiana tabacum HOM05D005219 ORTHO05D006451 4.9e-35 151.8 111 64.9
Peaxi162Scf00525g00059 Petunia axillaris HOM05D005219 ORTHO05D006451 4.9e-35 151.8 111 64.9
BcaB08g37236 Brassica carinata HOM05D005219 ORTHO05D006451 6.4e-35 151.4 148 51.4
A10p28110 Brassica napus HOM05D005219 ORTHO05D006451 6.4e-35 151.4 148 51.4
C03p04490 Brassica napus HOM05D005219 ORTHO05D006451 6.4e-35 151.4 111 63.1
C09p68310 Brassica napus HOM05D005219 ORTHO05D006451 6.4e-35 151.4 148 51.4
BolC9t59579H Brassica oleracea HOM05D005219 ORTHO05D006451 6.4e-35 151.4 148 51.4
BraA10t44860Z Brassica rapa HOM05D005219 ORTHO05D006451 6.4e-35 151.4 148 51.4
Os02g0556900 Oryza sativa ssp. japonica HOM05D005219 ORTHO05D006451 8.4e-35 151.0 112 60.7
Nitab4.5_0000496g0030 Nicotiana tabacum HOM05D005219 ORTHO05D006451 5.4e-34 148.3 111 64.0
Hma1.2p1_0057F.1_g032080 Hydrangea macrophylla HOM05D005219 ORTHO05D006451 2.1e-33 146.4 121 62.0
Ah.06g191770 Amaranthus hybridus HOM05D005219 ORTHO05D006451 2.7e-33 146.0 108 65.7
Aa31LG3G17910 Aethionema arabicum HOM05D005219 ORTHO05D006451 4.6e-33 145.2 176 46.6
DCAR_009584 Daucus carota HOM05D005219 ORTHO05D006451 4.6e-33 145.2 112 63.4
PGSC0003DMG400023442 Solanum tuberosum HOM05D005219 ORTHO05D006451 4.6e-33 145.2 111 62.2
Os04g0439300 Oryza sativa ssp. japonica HOM05D005219 ORTHO05D006451 6.0e-33 144.8 112 58.0
CAN.G1156.53 Capsicum annuum HOM05D005219 ORTHO05D006451 7.8e-33 144.4 112 63.4
Glyma.08G004700 Glycine max HOM05D005219 ORTHO05D006451 1.1e-31 140.6 168 44.0
Sopen05g034930 Solanum pennellii HOM05D005219 ORTHO05D006451 1.5e-31 140.2 111 62.2
Migut.H00795 Erythranthe guttata HOM05D005219 ORTHO05D006451 3.3e-31 139.0 109 59.6
Glyma.05G197300 Glycine max HOM05D005219 ORTHO05D006451 3.3e-31 139.0 168 43.5
Oeu037875.1 Olea europaea HOM05D005219 ORTHO05D006451 4.3e-31 138.7 103 66.0
Solyc05g056530.4 Solanum lycopersicum HOM05D005219 ORTHO05D006451 5.6e-31 138.3 111 62.2
Hund22177 Selenicereus undatus HOM05D005219 ORTHO05D006451 9.6e-31 137.5 108 61.1
SGA_v2.0_scaffold54G19585 Striga asiatica HOM05D005219 ORTHO05D006451 1.6e-30 136.7 106 57.5
Aqoxy6G00109 Aquilegia oxysepala HOM05D005219 ORTHO05D006451 2.1e-30 136.3 108 61.1
unitig_899.g14489 Utricularia gibba HOM05D005219 ORTHO05D006451 2.1e-30 136.3 105 60.0
HanXRQChr02g0043081 Helianthus annuus HOM05D005219 ORTHO05D006451 1.8e-29 133.3 112 58.9
HPP92_011421 Vanilla planifolia HOM05D005219 ORTHO05D006451 2.6e-28 129.4 109 55.0
SEGI_19215 Sequoiadendron giganteum HOM05D005219 ORTHO05D006451 3.4e-28 129.0 106 57.5
ATR0737G007 Amborella trichopoda HOM05D005219 ORTHO05D006451 3.8e-27 125.6 150 46.0
Lsat_1_v5_gn_5_69540 Lactuca sativa HOM05D005219 ORTHO05D006451 1.1e-26 124.0 109 53.2
Mapoly0096s0060 Marchantia polymorpha HOM05D005219 ORTHO05D006451 5.4e-26 121.7 109 52.3
MBI07_g10939_MAGBIO Magnolia biondii HOM05D005219 ORTHO05D006451 6.0e-25 118.2 110 53.6
DCAR_019997 Daucus carota HOM05D005219 ORTHO05D006451 1.0e-24 117.5 165 40.6
Pp3c1_29080 Physcomitrium patens HOM05D005219 ORTHO05D006451 1.3e-24 117.1 138 47.8
Pp3c2_17910 Physcomitrium patens HOM05D005219 ORTHO05D006451 1.8e-24 116.7 107 53.3
SMO169G0116 Selaginella moellendorffii HOM05D005219 ORTHO05D006451 1.8e-24 116.7 106 54.7
ECA233G5772 Erigeron canadensis HOM05D005219 ORTHO05D006451 3.0e-24 115.9 161 44.7
HPP92_027054 Vanilla planifolia HOM05D005219 ORTHO05D006451 8.1e-22 107.8 111 48.6
Rhsim10G0123800 Rhododendron simsii HOM05D005219 ORTHO05D006451 4.9e-19 98.6 60 71.7
MSTRG.23501 Avicennia marina HOM05D005219 ORTHO05D006451 1.0e-16 90.9 117 41.0
Zm00001eb182070 Zea mays HOM05D005219 ORTHO05D006451 3.9e-16 89.0 60 60.0
SGA_v2.0_scaffold211G42145 Striga asiatica HOM05D005219 ORTHO05D006451 1.5e-15 87.0 115 39.1
CBR_g15970 Chara braunii HOM05D005219 ORTHO05D006451 2.5e-15 86.3 65 55.4
CBR_g38007 Chara braunii HOM05D001908 ORTHO05D001892 3.9e-08 62.4 104 34.6
CBR_g31875 Chara braunii HOM05D028850 ORTHO05D006451 7.4e-07 58.2 102 33.3
ATR1136G012 Amborella trichopoda HOM05D005219 ORTHO05D006451 6.3e-06 55.1 48 56.2


User provided reference genes

Program Settings