Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra01G0143200 Salix brachista HOM05D007444 ORTHO05D009359 7.4e-127 457.2 230 100.0
Potri.001G196700 Populus trichocarpa HOM05D007444 ORTHO05D009359 1.8e-96 356.3 205 85.9
Manes.11G025100 Manihot esculenta HOM05D007444 ORTHO05D009359 2.7e-52 209.5 228 54.4
TWI36G0277 Tripterygium wilfordii HOM05D007444 ORTHO05D009359 2.5e-50 203.0 220 53.2
TWI36G1725 Tripterygium wilfordii HOM05D007444 ORTHO05D009359 2.5e-50 203.0 220 53.2
Duzib235G0092 Durio zibethinus HOM05D007444 ORTHO05D009359 6.8e-48 194.9 218 48.6
Eucgr.F03140 Eucalyptus grandis HOM05D007444 ORTHO05D009359 1.6e-44 183.7 222 47.7
Glyma.15G024900 Glycine max HOM05D007444 ORTHO05D009359 3.5e-44 182.6 211 46.9
CiPaw.02G139200 Carya illinoinensis HOM05D007444 ORTHO05D009359 6.0e-44 181.8 226 45.1
Aqoxy7G01186 Aquilegia oxysepala HOM05D007444 ORTHO05D009359 2.3e-43 179.9 238 41.6
Ciclev10026127m.g Citrus clementina HOM05D007444 ORTHO05D009359 2.3e-43 179.9 225 47.6
CSS0030092 Camellia sinensis var. sinensis HOM05D007444 ORTHO05D009359 3.0e-43 179.5 232 43.5
Prupe.3G047900 Prunus persica HOM05D007444 ORTHO05D009359 3.0e-43 179.5 238 45.8
QL05p011272 Quercus lobata HOM05D007444 ORTHO05D009359 2.5e-42 176.4 229 44.5
Ca_01210_v3 Cicer arietinum L. HOM05D007444 ORTHO05D009359 5.6e-42 175.3 211 43.6
Phvul.005G158200 Phaseolus vulgaris HOM05D007444 ORTHO05D009359 7.3e-42 174.9 214 45.3
QL05p011652 Quercus lobata HOM05D007444 ORTHO05D009359 7.3e-42 174.9 230 47.4
MD09G1191700 Malus domestica HOM05D007444 ORTHO05D009359 9.5e-42 174.5 217 44.7
Medtr2g099820 Medicago truncatula HOM05D007444 ORTHO05D009359 1.2e-41 174.1 211 42.2
vmacro17027 Vaccinium macrocarpon HOM05D007444 ORTHO05D009359 6.2e-41 171.8 224 40.6
Cc04_g01830 Coffea canephora HOM05D007444 ORTHO05D009359 1.1e-40 171.0 219 42.5
FAN14G4700 Fragaria x ananassa HOM05D007444 ORTHO05D009359 1.1e-40 171.0 218 46.8
PSO478G1587 Papaver somniferum HOM05D007444 ORTHO05D009359 1.1e-40 171.0 246 42.3
GSVIVG01016873001 Vitis vinifera HOM05D007444 ORTHO05D009359 1.1e-40 171.0 208 45.7
FvH4_6g33680 Fragaria vesca HOM05D007444 ORTHO05D009359 5.2e-40 168.7 218 46.8
FAN09G3948 Fragaria x ananassa HOM05D007444 ORTHO05D009359 8.9e-40 167.9 219 47.0
PSO017G2704 Papaver somniferum HOM05D007444 ORTHO05D009359 8.9e-40 167.9 239 42.7
PGR119G0376 Punica granatum HOM05D007444 ORTHO05D009359 1.5e-39 167.2 170 50.6
Sc12g0010310 Simmondsia chinensis HOM05D007444 ORTHO05D009359 1.5e-39 167.2 220 42.3
RcHm_v2.0_Chr2g0143591 Rosa chinensis HOM05D007444 ORTHO05D009359 2.0e-39 166.8 224 45.1
Gohir.D06G198800 Gossypium hirsutum HOM05D007444 ORTHO05D009359 2.6e-39 166.4 173 49.7
Haze_15975 Corylus avellana HOM05D007444 ORTHO05D009359 2.9e-38 162.9 178 47.2
Sed0011511 Sechium edule HOM05D007444 ORTHO05D009359 2.9e-38 162.9 219 41.6
TAR383G0129 Trochodendron aralioides HOM05D007444 ORTHO05D009359 3.7e-38 162.5 251 38.2
Carub.0003s1330 Capsella rubella HOM05D007444 ORTHO05D009359 4.9e-38 162.2 185 45.9
COL.COLO4_30661 Corchorus olitorius HOM05D007444 ORTHO05D009359 4.9e-38 162.2 188 48.9
Gorai.010G231700 Gossypium raimondii HOM05D007444 ORTHO05D009359 8.3e-38 161.4 173 48.6
QL05p010974 Quercus lobata HOM05D007444 ORTHO05D009359 8.3e-38 161.4 190 46.8
Ah.08g216430 Amaranthus hybridus HOM05D007444 ORTHO05D009359 1.1e-37 161.0 236 41.9
Psat5g292040 Pisum sativum HOM05D007444 ORTHO05D009359 1.4e-37 160.6 214 42.1
Lj9A520T86 Lonicera japonica HOM05D007444 ORTHO05D009359 1.9e-37 160.2 222 41.4
TPR.G6573 Trifolium pratense HOM05D007444 ORTHO05D009359 2.4e-37 159.8 216 39.8
Hund20831 Selenicereus undatus HOM05D007444 ORTHO05D009359 3.2e-37 159.5 241 43.2
Actinidia09035 Actinidia chinensis HOM05D007444 ORTHO05D009359 1.2e-36 157.5 232 40.9
Sp3g11980 Schrenkiella parvula HOM05D007444 ORTHO05D009359 1.6e-36 157.1 223 45.3
Gohir.A06G190400 Gossypium hirsutum HOM05D007444 ORTHO05D009359 2.1e-36 156.8 173 46.8
Nitab4.5_0005918g0020 Nicotiana tabacum HOM05D007444 ORTHO05D009359 2.1e-36 156.8 232 40.9
Thhalv10021210m.g Eutrema salsugineum HOM05D007444 ORTHO05D009359 2.7e-36 156.4 223 45.3
Cfa003571 Carpinus fangiana HOM05D007444 ORTHO05D009359 3.5e-36 156.0 178 47.2
Nitab4.5_0000255g0240 Nicotiana tabacum HOM05D007444 ORTHO05D009359 3.5e-36 156.0 232 40.1
BcaB06g25436 Brassica carinata HOM05D007444 ORTHO05D009359 1.0e-35 154.5 180 48.3
C05p54050 Brassica napus HOM05D007444 ORTHO05D009359 1.3e-35 154.1 178 48.9
BolC5t34070H Brassica oleracea HOM05D007444 ORTHO05D009359 1.3e-35 154.1 178 48.9
A05p35640 Brassica napus HOM05D007444 ORTHO05D009359 3.0e-35 152.9 178 47.8
EL10Ac7g16359 Beta vulgaris HOM05D007444 ORTHO05D009359 3.9e-35 152.5 232 44.0
BraA05t22371Z Brassica rapa HOM05D007444 ORTHO05D009359 5.1e-35 152.1 167 48.5
AUR62009843 Chenopodium quinoa HOM05D007444 ORTHO05D009359 5.1e-35 152.1 251 39.0
THA.LOC104815643 Tarenaya hassleriana HOM05D007444 ORTHO05D009359 5.1e-35 152.1 222 40.5
Lalb_Chr14g0372751 Lupinus albus HOM05D007444 ORTHO05D009359 2.5e-34 149.8 222 40.5
Aa31LG8G960 Aethionema arabicum HOM05D007444 ORTHO05D009359 3.3e-34 149.4 214 41.1
AL3G25850 Arabidopsis lyrata HOM05D007444 ORTHO05D009359 3.3e-34 149.4 220 42.7
CARHR088510 Cardamine hirsuta HOM05D007444 ORTHO05D009359 3.3e-34 149.4 168 47.0
Peaxi162Scf00207g00133 Petunia axillaris HOM05D007444 ORTHO05D009359 7.3e-34 148.3 181 44.2
Lj3g0023369 Lotus japonicus HOM05D007444 ORTHO05D009359 9.5e-34 147.9 209 43.5
arahy.Tifrunner.gnm1.ann1.ZV36U3 Arachis hypogaea HOM05D007444 ORTHO05D009359 1.2e-33 147.5 172 44.2
arahy.Tifrunner.gnm1.ann1.F397YD Arachis hypogaea HOM05D007444 ORTHO05D009359 2.1e-33 146.7 172 44.2
CANSAT56G0761 Cannabis sativa HOM05D007444 ORTHO05D009359 3.6e-33 146.0 181 44.2
CsaV3_3G043760 Cucumis sativus L. HOM05D007444 ORTHO05D009359 3.6e-33 146.0 212 41.0
AT3G13780 Arabidopsis thaliana HOM05D007444 ORTHO05D009359 4.7e-33 145.6 214 40.7
Migut.D00964 Erythranthe guttata HOM05D007444 ORTHO05D009359 2.4e-32 143.3 230 38.7
Lsat_1_v5_gn_1_35640 Lactuca sativa HOM05D007444 ORTHO05D009359 2.4e-32 143.3 222 41.0
SGA_v2.0_scaffold68G22914 Striga asiatica HOM05D007444 ORTHO05D009359 3.1e-32 142.9 229 38.0
Oeu039953.1 Olea europaea HOM05D007444 ORTHO05D009359 4.0e-32 142.5 237 39.2
DCAR_022704 Daucus carota HOM05D007444 ORTHO05D009359 7.6e-31 138.3 225 39.1
ClCG07G013830 Citrullus lanatus HOM05D007444 ORTHO05D009359 9.9e-31 137.9 229 38.4
PGSC0003DMG400004847 Solanum tuberosum HOM05D007444 ORTHO05D009359 9.9e-31 137.9 233 41.2
AUR62038156 Chenopodium quinoa HOM05D007444 ORTHO05D009359 1.7e-30 137.1 187 42.2
MSTRG.4771 Avicennia marina HOM05D007444 ORTHO05D009359 2.9e-30 136.3 234 37.2
Sopen06g022180 Solanum pennellii HOM05D007444 ORTHO05D009359 2.9e-30 136.3 232 39.7
CAN.G825.32 Capsicum annuum HOM05D007444 ORTHO05D009359 1.6e-28 130.6 231 39.4
MELO3C013088.2 Cucumis melo HOM05D007444 ORTHO05D009359 3.5e-28 129.4 211 41.7
HanXRQChr02g0031731 Helianthus annuus HOM05D007444 ORTHO05D009359 5.1e-27 125.6 210 41.9
MBI01_g20340_MAGBIO Magnolia biondii HOM05D007444 ORTHO05D009359 6.6e-27 125.2 284 33.5
SalBow7G2527 Salvia bowleyana HOM05D007444 ORTHO05D009359 6.6e-27 125.2 227 37.0
HPP92_005228 Vanilla planifolia HOM05D007444 ORTHO05D009359 5.3e-24 115.5 260 32.3
Cpa.g.sc25.50 Carica papaya HOM05D007444 ORTHO05D009359 1.2e-23 114.4 174 43.7
CDE05G3416 Ceratophyllum demersum HOM05D007444 ORTHO05D009359 2.6e-23 113.2 255 32.2
Rhsim12G0206600 Rhododendron simsii HOM05D007444 ORTHO05D009359 6.4e-22 108.6 148 40.5
SEGI_13370 Sequoiadendron giganteum HOM05D007444 ORTHO05D009359 5.4e-21 105.5 222 36.5
Dinv37906 Davidia involucrata HOM05D007444 ORTHO05D009359 6.0e-20 102.1 163 40.5
Zm00001eb277400 Zea mays HOM05D007444 ORTHO05D009359 3.0e-19 99.8 218 31.7
Solyc06g062700.3 Solanum lycopersicum HOM05D007444 ORTHO05D009359 1.4e-16 90.9 152 37.5
ECA247G2926 Erigeron canadensis HOM05D000045 ORTHO05D000067 1.1e-13 81.3 91 45.1
Hma1.2p1_0496F.1_g165930 Hydrangea macrophylla HOM05D007444 ORTHO05D009359 1.1e-13 81.3 105 42.9
ATR0109G024 Amborella trichopoda HOM05D007444 ORTHO05D009359 2.1e-12 77.0 128 37.5
Pp3c14_13390 Physcomitrium patens HOM05D007444 ORTHO05D009359 4.5e-07 59.3 113 30.1
Mapoly0028s0047 Marchantia polymorpha HOM05D007444 ORTHO05D009359 8.4e-06 55.1 118 29.7


User provided reference genes

Program Settings