Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra01G0139200 Salix brachista HOM05D006223 ORTHO05D009080 1.1e-111 406.8 220 100.0
Potri.001G172500 Populus trichocarpa HOM05D006223 ORTHO05D009080 1.8e-85 319.7 221 81.4
Manes.12G113900 Manihot esculenta HOM05D006223 ORTHO05D009080 3.3e-60 235.7 221 62.4
TWI73G0604 Tripterygium wilfordii HOM05D006223 ORTHO05D009080 5.9e-57 224.9 212 60.8
TWI09G0585 Tripterygium wilfordii HOM05D006223 ORTHO05D009080 1.7e-56 223.4 210 63.3
CSS0009729 Camellia sinensis var. sinensis HOM05D006223 ORTHO05D009080 3.2e-55 219.2 199 60.8
Actinidia11984 Actinidia chinensis HOM05D006223 ORTHO05D009080 4.2e-55 218.8 216 57.4
GSVIVG01000109001 Vitis vinifera HOM05D006223 ORTHO05D009080 1.2e-54 217.2 217 59.0
Dinv04050 Davidia involucrata HOM05D006223 ORTHO05D009080 4.7e-54 215.3 203 60.6
Lj7A96T45 Lonicera japonica HOM05D006223 ORTHO05D009080 7.9e-54 214.5 217 56.7
Ciclev10026365m.g Citrus clementina HOM05D006223 ORTHO05D009080 3.0e-53 212.6 215 58.1
Atru.chr3.1008 Acer truncatum HOM05D006223 ORTHO05D009080 3.9e-53 212.2 236 56.4
Duzib147G0613 Durio zibethinus HOM05D006223 ORTHO05D009080 6.7e-53 211.5 237 54.4
Medtr4g097030 Medicago truncatula HOM05D006223 ORTHO05D009080 6.7e-53 211.5 210 56.7
Ca_22107_v3 Cicer arietinum L. HOM05D006223 ORTHO05D009080 1.5e-52 210.3 213 55.9
Ca_22114_v3 Cicer arietinum L. HOM05D006223 ORTHO05D009080 1.5e-52 210.3 213 55.9
Glyma.17G160900 Glycine max HOM05D006223 ORTHO05D009080 1.5e-52 210.3 206 56.3
TPR.G24252 Trifolium pratense HOM05D006223 ORTHO05D009080 4.4e-52 208.8 211 54.0
Gohir.A11G215000 Gossypium hirsutum HOM05D006223 ORTHO05D009080 7.4e-52 208.0 233 53.6
Gorai.007G223400 Gossypium raimondii HOM05D006223 ORTHO05D009080 7.4e-52 208.0 222 54.5
Haze_15285 Corylus avellana HOM05D006223 ORTHO05D009080 9.7e-52 207.6 237 53.2
Cpa.g.sc6.19 Carica papaya HOM05D006223 ORTHO05D009080 1.7e-51 206.8 218 55.0
Thecc.01G072400 Theobroma cacao HOM05D006223 ORTHO05D009080 1.7e-51 206.8 230 55.2
GSVIVG01000118001 Vitis vinifera HOM05D006223 ORTHO05D009080 1.7e-51 206.8 209 57.4
Lj4g0019733 Lotus japonicus HOM05D006223 ORTHO05D009080 3.7e-51 205.7 214 56.1
Glyma.05G105500 Glycine max HOM05D006223 ORTHO05D009080 4.8e-51 205.3 207 56.5
Gohir.D11G208400 Gossypium hirsutum HOM05D006223 ORTHO05D009080 4.8e-51 205.3 222 54.1
DCAR_025799 Daucus carota HOM05D006223 ORTHO05D009080 6.3e-51 204.9 210 53.3
Phvul.003G235100 Phaseolus vulgaris HOM05D006223 ORTHO05D009080 1.4e-50 203.8 209 55.0
Eucgr.I00706 Eucalyptus grandis HOM05D006223 ORTHO05D009080 3.1e-50 202.6 219 52.5
Sed0023944 Sechium edule HOM05D006223 ORTHO05D009080 4.1e-50 202.2 212 52.8
Nitab4.5_0000142g0070 Nicotiana tabacum HOM05D006223 ORTHO05D009080 9.1e-50 201.1 219 53.0
TAR625G1165 Trochodendron aralioides HOM05D006223 ORTHO05D009080 1.6e-49 200.3 210 57.1
Psat4g081960 Pisum sativum HOM05D006223 ORTHO05D009080 1.0e-48 197.6 209 51.7
VMungo0251G3324 Vigna mungo HOM05D006223 ORTHO05D009080 1.3e-48 197.2 216 55.6
Nn5g30588 Nelumbo nucifera HOM05D006223 ORTHO05D009080 1.7e-48 196.8 223 54.3
Nitab4.5_0002119g0100 Nicotiana tabacum HOM05D006223 ORTHO05D009080 5.0e-48 195.3 222 51.8
CAN.G1075.35 Capsicum annuum HOM05D006223 ORTHO05D009080 1.1e-47 194.1 217 51.2
THA.LOC104827599 Tarenaya hassleriana HOM05D006223 ORTHO05D009080 9.4e-47 191.0 204 52.0
Migut.H00350 Erythranthe guttata HOM05D006223 ORTHO05D009080 1.6e-46 190.3 211 51.2
HanXRQChr15g0472641 Helianthus annuus HOM05D006223 ORTHO05D009080 2.7e-46 189.5 212 50.9
FAN28G1261 Fragaria x ananassa HOM05D006223 ORTHO05D009080 1.4e-45 187.2 208 54.3
PSO170G6824 Papaver somniferum HOM05D006223 ORTHO05D009080 1.4e-45 187.2 210 50.5
Lsat_1_v5_gn_3_86181 Lactuca sativa HOM05D006223 ORTHO05D009080 2.3e-45 186.4 211 50.7
Aqoxy5G00869 Aquilegia oxysepala HOM05D006223 ORTHO05D009080 3.0e-45 186.0 210 50.5
Lalb_Chr05g0225861 Lupinus albus HOM05D006223 ORTHO05D009080 4.0e-45 185.7 208 54.8
CiPaw.01G004700 Carya illinoinensis HOM05D006223 ORTHO05D009080 5.2e-45 185.3 175 58.3
AUR62040240 Chenopodium quinoa HOM05D006223 ORTHO05D009080 5.2e-45 185.3 214 50.9
FAN19G0818 Fragaria x ananassa HOM05D006223 ORTHO05D009080 6.7e-45 184.9 207 54.1
MSTRG.23673 Avicennia marina HOM05D006223 ORTHO05D009080 8.8e-45 184.5 213 50.2
CANSAT01G0277 Cannabis sativa HOM05D006223 ORTHO05D009080 8.8e-45 184.5 216 53.2
FvH4_1g17670 Fragaria vesca HOM05D006223 ORTHO05D009080 8.8e-45 184.5 208 53.8
Hund16399 Selenicereus undatus HOM05D006223 ORTHO05D009080 1.2e-44 184.1 207 51.7
PGSC0003DMG400021418 Solanum tuberosum HOM05D006223 ORTHO05D009080 1.2e-44 184.1 201 52.2
Cfa004130 Carpinus fangiana HOM05D006223 ORTHO05D009080 2.6e-44 183.0 143 66.4
Solyc02g092390.3 Solanum lycopersicum HOM05D006223 ORTHO05D009080 7.5e-44 181.4 202 53.0
Sopen02g036940 Solanum pennellii HOM05D006223 ORTHO05D009080 7.5e-44 181.4 200 52.5
AUR62004007 Chenopodium quinoa HOM05D006223 ORTHO05D009080 9.7e-44 181.0 196 52.0
FAN26G2055 Fragaria x ananassa HOM05D006223 ORTHO05D009080 9.7e-44 181.0 208 53.4
arahy.Tifrunner.gnm1.ann1.BP3FRD Arachis hypogaea HOM05D006223 ORTHO05D009080 1.7e-43 180.3 216 50.0
PGR004G2352 Punica granatum HOM05D006223 ORTHO05D009080 1.7e-43 180.3 148 61.5
RcHm_v2.0_Chr2g0108001 Rosa chinensis HOM05D006223 ORTHO05D009080 2.2e-43 179.9 213 51.6
Cc06_g22830 Coffea canephora HOM05D006223 ORTHO05D009080 3.7e-43 179.1 212 48.1
MELO3C020909.2 Cucumis melo HOM05D006223 ORTHO05D009080 8.2e-43 177.9 209 49.3
Rhsim10G0099700 Rhododendron simsii HOM05D006223 ORTHO05D009080 3.1e-42 176.0 227 48.5
AT3G49890 Arabidopsis thaliana HOM05D006223 ORTHO05D009080 4.1e-42 175.6 209 47.4
Sp5g12220 Schrenkiella parvula HOM05D006223 ORTHO05D009080 5.3e-42 175.3 216 46.3
ECA246G3554 Erigeron canadensis HOM05D006223 ORTHO05D009080 7.0e-42 174.9 210 49.5
Prupe.6G221000 Prunus persica HOM05D006223 ORTHO05D009080 5.9e-41 171.8 213 48.8
Aa31LG4G18340 Aethionema arabicum HOM05D006223 ORTHO05D009080 1.0e-40 171.0 215 46.5
AL5G29900 Arabidopsis lyrata HOM05D006223 ORTHO05D009080 1.7e-40 170.2 209 47.8
vmacro05408 Vaccinium macrocarpon HOM05D006223 ORTHO05D009080 7.2e-39 164.9 306 39.9
Peaxi162Scf00548g00643 Petunia axillaris HOM05D006223 ORTHO05D009080 9.4e-39 164.5 211 47.9
A03p47580 Brassica napus HOM05D006223 ORTHO05D009080 6.1e-38 161.8 202 46.5
Thhalv10010709m.g Eutrema salsugineum HOM05D006223 ORTHO05D009080 8.0e-38 161.4 212 45.3
Ah.03g140550 Amaranthus hybridus HOM05D006223 ORTHO05D009080 1.0e-37 161.0 202 47.5
arahy.Tifrunner.gnm1.ann1.83HTFG Arachis hypogaea HOM05D006223 ORTHO05D009080 1.0e-37 161.0 250 42.8
ClCG02G012630 Citrullus lanatus HOM05D003401 ORTHO05D003906 1.0e-37 161.0 194 49.0
CARHR158970 Cardamine hirsuta HOM05D006223 ORTHO05D009080 6.8e-37 158.3 216 41.7
Zm00001eb400790 Zea mays HOM05D006223 ORTHO05D009080 6.8e-37 158.3 204 47.1
MD15G1297100 Malus domestica HOM05D006223 ORTHO05D009080 2.0e-36 156.8 155 56.1
Carub.0005s1625 Capsella rubella HOM05D006223 ORTHO05D009080 2.6e-36 156.4 205 42.9
SGA_v2.0_scaffold72G24074 Striga asiatica HOM05D006223 ORTHO05D009080 2.8e-35 152.9 156 54.5
HPP92_024913 Vanilla planifolia HOM05D006223 ORTHO05D009080 2.8e-35 152.9 214 46.3
ATR1153G042 Amborella trichopoda HOM05D006223 ORTHO05D009080 3.7e-35 152.5 214 44.9
C07p45560 Brassica napus HOM05D006223 ORTHO05D009080 6.3e-35 151.8 172 48.3
BolC7t45077H Brassica oleracea HOM05D006223 ORTHO05D009080 6.3e-35 151.8 172 48.3
BraA03t13871Z Brassica rapa HOM05D006223 ORTHO05D009080 1.1e-34 151.0 198 46.0
CDE06G0771 Ceratophyllum demersum HOM05D006223 ORTHO05D009080 1.8e-34 150.2 207 44.0
Hma1.2p1_0852F.1_g228470 Hydrangea macrophylla HOM05D006223 ORTHO05D009080 9.1e-34 147.9 126 63.5
Os03g0201200 Oryza sativa ssp. japonica HOM05D006223 ORTHO05D009080 3.0e-29 132.9 208 43.3
CSS0032370 Camellia sinensis var. sinensis HOM05D006223 ORTHO05D009080 1.0e-24 117.9 93 67.7
Sc16g0002890 Simmondsia chinensis HOM05D006223 ORTHO05D009080 1.7e-24 117.1 146 50.0
SHI12778 Sapria himalayana HOM05D006223 ORTHO05D009080 1.1e-23 114.4 193 43.0
SEGI_10369 Sequoiadendron giganteum HOM05D006223 ORTHO05D009080 4.7e-22 109.0 174 42.5
EL10Ac6g15621 Beta vulgaris HOM05D006223 ORTHO05D009080 8.0e-22 108.2 202 38.1
COL.COLO4_11574 Corchorus olitorius HOM05D006223 ORTHO05D009080 1.7e-19 100.5 147 46.3
C08p24920 Brassica napus HOM05D006223 ORTHO05D009080 1.7e-16 90.5 162 35.2
BolC8t50110H Brassica oleracea HOM05D006223 ORTHO05D009080 2.3e-16 90.1 169 34.9
FAN23G0832 Fragaria x ananassa HOM05D006223 ORTHO05D009080 3.1e-13 79.7 123 42.3
unitig_21.g20422 Utricularia gibba HOM05D005082 ORTHO05D006474 1.2e-12 77.8 190 36.3
AagrBONN_evm.TU.Sc2ySwM_228.3102 Anthoceros agrestis HOM05D004796 ORTHO05D006527 5.8e-12 75.5 191 32.5
BcaB05g23172 Brassica carinata HOM05D006223 ORTHO05D009080 9.8e-12 74.7 134 35.8
HPP92_024909 Vanilla planifolia HOM05D006223 ORTHO05D009080 1.1e-10 71.2 90 48.9
Pp3c5_6560 Physcomitrium patens HOM05D006223 ORTHO05D009080 2.4e-10 70.1 227 29.5
CSS0023916 Camellia sinensis var. sinensis HOM05D006223 ORTHO05D009080 7.8e-09 65.1 49 63.3


User provided reference genes

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