Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra01G0135500 Salix brachista HOM05D006098 ORTHO05D007470 3.6e-250 867.8 454 100.0
Potri.001G193400 Populus trichocarpa HOM05D006098 ORTHO05D007470 1.8e-233 812.4 456 92.8
Potri.003G033300 Populus trichocarpa HOM05D006098 ORTHO05D007470 1.7e-204 716.1 396 91.9
Sabra03G0019100 Salix brachista HOM05D006098 ORTHO05D007470 1.4e-193 679.9 482 75.5
Manes.15G184300 Manihot esculenta HOM05D006098 ORTHO05D007470 1.3e-180 636.7 463 72.8
COL.COLO4_10360 Corchorus olitorius HOM05D006098 ORTHO05D007470 2.5e-179 632.5 427 76.8
Gorai.008G220000 Gossypium raimondii HOM05D006098 ORTHO05D007470 4.8e-178 628.2 454 73.6
Thecc.03G318000 Theobroma cacao HOM05D006098 ORTHO05D007470 1.1e-177 627.1 451 75.6
Duzib205G1615 Durio zibethinus HOM05D006098 ORTHO05D007470 2.0e-176 622.9 461 74.0
Dinv41811 Davidia involucrata HOM05D006098 ORTHO05D007470 4.9e-175 618.2 378 82.3
Atru.chr8.2640 Acer truncatum HOM05D006098 ORTHO05D007470 7.1e-174 614.4 470 71.1
Cpa.g.sc71.63 Carica papaya HOM05D006098 ORTHO05D007470 7.1e-174 614.4 442 74.0
Gorai.004G178500 Gossypium raimondii HOM05D006098 ORTHO05D007470 4.6e-173 611.7 458 71.4
Gohir.A08G150000 Gossypium hirsutum HOM05D006098 ORTHO05D007470 5.1e-172 608.2 447 72.5
TAR629G3250 Trochodendron aralioides HOM05D006098 ORTHO05D007470 7.6e-168 594.3 389 77.1
Duzib068G0239 Durio zibethinus HOM05D006098 ORTHO05D007470 8.4e-167 590.9 450 70.7
Nn1g09368 Nelumbo nucifera HOM05D006098 ORTHO05D007470 6.0e-165 584.7 443 69.5
CSS0030969 Camellia sinensis var. sinensis HOM05D006098 ORTHO05D007470 1.0e-164 583.9 378 77.5
GSVIVG01036872001 Vitis vinifera HOM05D006098 ORTHO05D007470 2.3e-164 582.8 454 68.7
Cc08_g05440 Coffea canephora HOM05D006098 ORTHO05D007470 1.9e-163 579.7 394 74.6
Peaxi162Scf00045g00071 Petunia axillaris HOM05D006098 ORTHO05D007470 3.3e-163 578.9 382 76.4
PGR031G3371 Punica granatum HOM05D006098 ORTHO05D007470 3.7e-162 575.5 396 76.5
Oeu057164.1 Olea europaea HOM05D006098 ORTHO05D007470 1.1e-161 573.9 396 73.5
DCAR_028369 Daucus carota HOM05D006098 ORTHO05D007470 1.8e-161 573.2 376 76.6
Actinidia14735 Actinidia chinensis HOM05D006098 ORTHO05D007470 9.0e-161 570.9 378 77.2
ECA246G0847 Erigeron canadensis HOM05D006098 ORTHO05D007470 2.0e-160 569.7 380 76.6
Oeu042191.1 Olea europaea HOM05D006098 ORTHO05D007470 2.0e-160 569.7 396 73.2
Nn7g37397 Nelumbo nucifera HOM05D006098 ORTHO05D007470 2.6e-160 569.3 384 76.0
FvH4_2g37220 Fragaria vesca HOM05D006098 ORTHO05D007470 3.4e-160 568.9 386 75.9
Oeu042192.1 Olea europaea HOM05D006098 ORTHO05D007470 3.4e-160 568.9 385 75.1
FAN27G2650 Fragaria x ananassa HOM05D006098 ORTHO05D007470 3.8e-159 565.5 386 75.4
Nitab4.5_0011712g0010 Nicotiana tabacum HOM05D006098 ORTHO05D007470 3.8e-159 565.5 394 73.1
PGSC0003DMG400018483 Solanum tuberosum HOM05D006098 ORTHO05D007470 3.8e-159 565.5 382 75.1
FAN20G1855 Fragaria x ananassa HOM05D006098 ORTHO05D007470 4.9e-159 565.1 386 75.6
Rhsim11G0034900 Rhododendron simsii HOM05D006098 ORTHO05D007470 1.1e-158 563.9 376 76.1
Actinidia01257 Actinidia chinensis HOM05D006098 ORTHO05D007470 3.2e-158 562.4 369 76.4
RcHm_v2.0_Chr6g0304491 Rosa chinensis HOM05D006098 ORTHO05D007470 3.2e-158 562.4 386 75.4
Lsat_1_v5_gn_3_19721 Lactuca sativa HOM05D006098 ORTHO05D007470 4.2e-158 562.0 380 74.7
CAN.G884.9 Capsicum annuum HOM05D006098 ORTHO05D007470 1.6e-157 560.1 382 74.9
Solyc08g075520.4 Solanum lycopersicum HOM05D006098 ORTHO05D007470 1.6e-157 560.1 380 75.0
AUR62010477 Chenopodium quinoa HOM05D006098 ORTHO05D007470 4.6e-157 558.5 410 70.2
Peaxi162Scf00053g00062 Petunia axillaris HOM05D006098 ORTHO05D007470 4.6e-157 558.5 380 74.5
SalBow4G1396 Salvia bowleyana HOM05D006098 ORTHO05D007470 6.0e-157 558.1 396 70.5
Actinidia18166 Actinidia chinensis HOM05D006098 ORTHO05D007470 1.0e-156 557.4 396 73.0
THA.LOC104811082 Tarenaya hassleriana HOM05D006098 ORTHO05D007470 1.0e-156 557.4 396 74.2
CAN.G884.14 Capsicum annuum HOM05D006098 ORTHO05D007470 1.8e-156 556.6 382 74.3
Sopen08g001580 Solanum pennellii HOM05D006098 ORTHO05D007470 2.3e-156 556.2 382 74.1
MBI15_g33454_MAGBIO Magnolia biondii HOM05D006098 ORTHO05D007470 3.9e-156 555.4 377 75.9
EL10Ac5g12579 Beta vulgaris HOM05D006098 ORTHO05D007470 6.7e-156 554.7 411 69.8
FAN15G0890 Fragaria x ananassa HOM05D006098 ORTHO05D007470 8.7e-156 554.3 389 74.6
vmacro00080 Vaccinium macrocarpon HOM05D006098 ORTHO05D007470 1.9e-155 553.1 378 75.1
HanXRQChr17g0537231 Helianthus annuus HOM05D006098 ORTHO05D007470 1.3e-154 550.4 380 75.3
Nitab4.5_0001175g0140 Nicotiana tabacum HOM05D006098 ORTHO05D007470 1.6e-154 550.1 395 72.4
Nitab4.5_0000985g0060 Nicotiana tabacum HOM05D006098 ORTHO05D007470 3.7e-154 548.9 380 73.9
Gohir.D12G205100 Gossypium hirsutum HOM05D006098 ORTHO05D007470 1.1e-153 547.4 337 81.6
MSTRG.1762 Avicennia marina HOM05D006098 ORTHO05D007470 1.4e-153 547.0 396 70.5
Ah.12g058500 Amaranthus hybridus HOM05D006098 ORTHO05D007470 6.9e-153 544.7 411 69.3
CAN.G1026.8 Capsicum annuum HOM05D006098 ORTHO05D007470 1.2e-152 543.9 380 73.2
Solyc08g005560.3 Solanum lycopersicum HOM05D006098 ORTHO05D007470 1.2e-152 543.9 382 72.5
Lj8A337G13 Lonicera japonica HOM05D006098 ORTHO05D007470 3.4e-152 542.3 364 75.8
Gohir.A12G202400 Gossypium hirsutum HOM05D006098 ORTHO05D007470 4.5e-152 542.0 337 81.0
Nitab4.5_0000898g0120 Nicotiana tabacum HOM05D006098 ORTHO05D007470 5.9e-152 541.6 384 72.4
Rhsim11G0035500 Rhododendron simsii HOM05D006098 ORTHO05D007470 1.0e-151 540.8 418 68.9
AUR62030416 Chenopodium quinoa HOM05D006098 ORTHO05D007470 1.7e-151 540.0 442 64.7
HanXRQChr13g0411151 Helianthus annuus HOM05D006098 ORTHO05D007470 5.0e-151 538.5 380 74.2
Oeu046790.1 Olea europaea HOM05D006098 ORTHO05D007470 5.0e-151 538.5 382 71.2
Migut.A00537 Erythranthe guttata HOM05D006098 ORTHO05D007470 9.3e-150 534.3 395 69.9
ECA240G1264 Erigeron canadensis HOM05D006098 ORTHO05D007470 1.6e-149 533.5 380 72.4
Nitab4.5_0000030g0370 Nicotiana tabacum HOM05D006098 ORTHO05D007470 8.8e-148 527.7 364 74.5
Lsat_1_v5_gn_5_57121 Lactuca sativa HOM05D006098 ORTHO05D007470 1.7e-146 523.5 395 71.9
HanXRQChr03g0081041 Helianthus annuus HOM05D006098 ORTHO05D007470 2.0e-144 516.5 379 71.8
PSO541G2197 Papaver somniferum HOM05D006098 ORTHO05D007470 2.6e-144 516.2 382 70.2
Actinidia32783 Actinidia chinensis HOM05D006098 ORTHO05D007470 4.5e-144 515.4 371 72.2
ATR0568G039 Amborella trichopoda HOM05D006098 ORTHO05D007470 4.5e-144 515.4 378 70.9
Dinv37422 Davidia involucrata HOM05D006098 ORTHO05D007470 1.0e-143 514.2 402 68.2
PSO675G7908 Papaver somniferum HOM05D006098 ORTHO05D007470 1.7e-143 513.5 382 69.6
SGA_v2.0_scaffold111G31352 Striga asiatica HOM05D006098 ORTHO05D007470 1.7e-143 513.5 376 69.7
Manes.17G016300 Manihot esculenta HOM05D006098 ORTHO05D007470 5.7e-139 498.4 375 71.7
AL7G34930 Arabidopsis lyrata HOM05D006098 ORTHO05D007470 4.8e-138 495.4 464 60.3
SalBow8G2199 Salvia bowleyana HOM05D006098 ORTHO05D007470 1.8e-137 493.4 385 67.0
AT4G19160 Arabidopsis thaliana HOM05D006098 ORTHO05D007470 9.1e-137 491.1 469 59.7
Aa31LG6G1850 Aethionema arabicum HOM05D006098 ORTHO05D007470 1.2e-136 490.7 446 60.3
Carub.0007s2199 Capsella rubella HOM05D006098 ORTHO05D007470 5.9e-136 488.4 472 59.1
CDE01G0744 Ceratophyllum demersum HOM05D006098 ORTHO05D007470 3.0e-132 476.1 384 63.8
Sp7g17860 Schrenkiella parvula HOM05D006098 ORTHO05D007470 1.6e-128 463.8 490 55.7
CARHR226030 Cardamine hirsuta HOM05D006098 ORTHO05D007470 5.9e-128 461.8 508 55.3
unitig_37.g12121 Utricularia gibba HOM05D006098 ORTHO05D007470 1.3e-127 460.7 375 64.8
SEGI_14227 Sequoiadendron giganteum HOM05D006098 ORTHO05D007470 1.6e-125 453.8 369 62.9
BcaNung04007 Brassica carinata HOM05D006098 ORTHO05D007470 1.0e-124 451.1 455 57.6
Thhalv10025127m.g Eutrema salsugineum HOM05D006098 ORTHO05D007470 1.4e-124 450.7 483 54.9
BcaC09g51434 Brassica carinata HOM05D006098 ORTHO05D007470 2.0e-123 446.8 406 61.8
Peaxi162Scf00876g00435 Petunia axillaris HOM05D006098 ORTHO05D007470 7.5e-123 444.9 382 62.6
C01p13160 Brassica napus HOM05D006098 ORTHO05D007470 1.7e-122 443.7 407 61.7
BolC1t01289H Brassica oleracea HOM05D006098 ORTHO05D007470 1.7e-122 443.7 407 61.7
BraA01t01058Z Brassica rapa HOM05D006098 ORTHO05D007470 5.3e-121 438.7 396 61.9
A01p11120 Brassica napus HOM05D006098 ORTHO05D007470 6.5e-119 431.8 409 59.2
Sopen08g024170 Solanum pennellii HOM05D006098 ORTHO05D007470 1.6e-117 427.2 294 73.1
PGSC0003DMG400016110 Solanum tuberosum HOM05D006098 ORTHO05D007470 5.7e-115 418.7 294 72.1
BcaC01g00601 Brassica carinata HOM05D006098 ORTHO05D007470 4.0e-108 396.0 445 51.9
A08p14200 Brassica napus HOM05D006098 ORTHO05D007470 4.4e-107 392.5 380 57.6
BraA08t33414Z Brassica rapa HOM05D006098 ORTHO05D007470 4.4e-107 392.5 380 57.6
C03p81800 Brassica napus HOM05D006098 ORTHO05D007470 1.3e-106 391.0 436 52.8
BolC3t20457H Brassica oleracea HOM05D006098 ORTHO05D007470 1.3e-106 391.0 441 52.4
BcaB04g18531 Brassica carinata HOM05D006098 ORTHO05D007470 5.4e-105 385.6 384 56.5
Gohir.D08G171101 Gossypium hirsutum HOM05D006098 ORTHO05D007470 5.0e-103 379.0 234 81.6
CAN.G947.35 Capsicum annuum HOM05D006098 ORTHO05D007470 8.0e-93 345.1 356 56.2
FAN27G0800 Fragaria x ananassa HOM05D006098 ORTHO05D007470 4.1e-89 332.8 285 65.3
MSTRG.13909 Avicennia marina HOM05D006098 ORTHO05D007470 2.9e-82 310.1 215 68.8
AagrBONN_evm.TU.Sc2ySwM_368.631 Anthoceros agrestis HOM05D006098 ORTHO05D007470 8.4e-66 255.4 368 41.3
HanXRQChr05g0158621 Helianthus annuus HOM05D006098 ORTHO05D007470 1.9e-62 244.2 164 79.9
FvH4_2g37180 Fragaria vesca HOM05D006098 ORTHO05D007470 2.4e-57 227.3 139 82.7
Pp3c12_14620 Physcomitrium patens HOM05D006098 ORTHO05D007470 2.4e-52 210.7 403 35.2
SMO364G0549 Selaginella moellendorffii HOM05D006098 ORTHO05D007470 2.4e-52 210.7 386 37.0
Hund11040 Selenicereus undatus HOM05D006098 ORTHO05D007470 4.6e-48 196.4 411 35.5
Oeu015533.1 Olea europaea HOM05D006098 ORTHO05D007470 9.0e-44 182.2 152 59.9
HanXRQChr09g0271561 Helianthus annuus HOM05D006098 ORTHO05D007470 1.5e-43 181.4 129 74.4
HanXRQChr11g0344761 Helianthus annuus HOM05D006098 ORTHO05D007470 1.7e-42 177.9 164 62.8
Eucgr.D02551 Eucalyptus grandis HOM05D006098 ORTHO05D007470 8.4e-42 175.6 121 75.2
Rhsim11G0035700 Rhododendron simsii HOM05D006098 ORTHO05D007470 7.1e-41 172.6 384 35.7
Eucgr.D02550 Eucalyptus grandis HOM05D006098 ORTHO05D007470 4.8e-37 159.8 122 64.8
Oeu042198.1 Olea europaea HOM05D006098 ORTHO05D007470 6.3e-37 159.5 239 44.8
Pp3c4_2130 Physcomitrium patens HOM05D006098 ORTHO05D007470 4.1e-28 130.2 316 32.3
Peaxi162Scf00527g00718 Petunia axillaris HOM05D006098 ORTHO05D007470 2.6e-27 127.5 196 40.3
RcHm_v2.0_Chr4g0402301 Rosa chinensis HOM05D006098 ORTHO05D007470 3.8e-26 123.6 119 58.0
HanXRQChr11g0344831 Helianthus annuus HOM05D006098 ORTHO05D007470 5.1e-23 113.2 82 72.0
Prupe.1G352900 Prunus persica HOM05D006098 ORTHO05D007470 1.7e-21 108.2 79 70.9
Aa31sc19G30 Aethionema arabicum HOM05D006098 ORTHO05D007470 7.7e-11 72.8 48 72.9
Cre14.g621850 Chlamydomonas reinhardtii HOM05D006098 ORTHO05D007470 2.2e-10 71.2 238 28.2
Sc11g0006450 Simmondsia chinensis HOM05D007414 ORTHO05D009482 8.5e-10 69.3 392 23.7
Aa31LG3G3710 Aethionema arabicum HOM05D006098 ORTHO05D007470 2.7e-08 64.3 63 55.6
Ah.12g062800 Amaranthus hybridus HOM05D007414 ORTHO05D009482 6.1e-08 63.2 361 24.1
Cc02_g30210 Coffea canephora HOM05D007414 ORTHO05D009482 1.8e-07 61.6 417 25.2
AagrBONN_evm.TU.Sc2ySwM_362.1466 Anthoceros agrestis HOM05D007414 ORTHO05D009482 2.3e-07 61.2 415 24.3
Mapoly0007s0139 Marchantia polymorpha HOM05D007414 ORTHO05D009482 6.8e-07 59.7 418 23.7
Pp3c11_910 Physcomitrium patens HOM05D007414 ORTHO05D009482 6.8e-07 59.7 422 23.2
AUR62032647 Chenopodium quinoa HOM05D007414 ORTHO05D009482 8.8e-07 59.3 275 24.4
AUR62026859 Chenopodium quinoa HOM05D007414 ORTHO05D009482 1.5e-06 58.5 275 24.0
CsaV3_5G024500 Cucumis sativus L. HOM05D007414 ORTHO05D009482 3.4e-06 57.4 394 22.6
EL10Ac2g02800 Beta vulgaris HOM05D007414 ORTHO05D009482 9.7e-06 55.8 408 24.0
Nitab4.5_0004955g0030 Nicotiana tabacum HOM05D007414 ORTHO05D009482 9.7e-06 55.8 278 26.6
TWI15G0498 Tripterygium wilfordii HOM05D007414 ORTHO05D009482 9.7e-06 55.8 376 22.9


User provided reference genes

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