Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra01G0135100 Salix brachista HOM05D008135 ORTHO05D010260 1.1e-47 193.0 99 100.0
Potri.001G194100 Populus trichocarpa HOM05D008135 ORTHO05D010260 1.8e-26 122.5 71 88.7
Thecc.06G106900 Theobroma cacao HOM05D008135 ORTHO05D010260 1.2e-17 93.2 70 67.1
CiPaw.01G227600 Carya illinoinensis HOM05D008135 ORTHO05D010260 5.0e-16 87.8 71 69.0
Manes.04G137100 Manihot esculenta HOM05D008135 ORTHO05D010260 1.1e-15 86.7 74 67.6
Cfa003610 Carpinus fangiana HOM05D008135 ORTHO05D010260 2.5e-15 85.5 70 64.3
Manes.11G029100 Manihot esculenta HOM05D008135 ORTHO05D010260 3.3e-15 85.1 83 60.2
QL05p015599 Quercus lobata HOM05D008135 ORTHO05D010260 3.3e-15 85.1 69 66.7
Nitab4.5_0006071g0080 Nicotiana tabacum HOM05D008135 ORTHO05D010260 1.2e-14 83.2 65 66.2
Rhsim08G0230800 Rhododendron simsii HOM05D008135 ORTHO05D010260 1.2e-14 83.2 52 80.8
Glyma.07G012900 Glycine max HOM05D008135 ORTHO05D010260 1.6e-14 82.8 73 64.4
vmacro18825 Vaccinium macrocarpon HOM05D008135 ORTHO05D010260 1.6e-14 82.8 61 73.8
QL05p015762 Quercus lobata HOM05D008135 ORTHO05D010260 2.1e-14 82.4 72 59.7
Solyc03g121340.1 Solanum lycopersicum HOM05D008135 ORTHO05D010260 2.1e-14 82.4 65 64.6
RcHm_v2.0_Chr2g0142321 Rosa chinensis HOM05D008135 ORTHO05D010260 3.6e-14 81.6 71 63.4
Prupe.3G053100 Prunus persica HOM05D008135 ORTHO05D010260 4.7e-14 81.3 73 61.6
Peaxi162Scf00038g01219 Petunia axillaris HOM05D008135 ORTHO05D010260 6.2e-14 80.9 66 65.2
Phvul.010G142400 Phaseolus vulgaris HOM05D008135 ORTHO05D010260 6.2e-14 80.9 80 57.5
Dinv30405 Davidia involucrata HOM05D008135 ORTHO05D010260 8.1e-14 80.5 54 75.9
Oeu052813.1 Olea europaea HOM05D008135 ORTHO05D010260 8.1e-14 80.5 59 71.2
Duzib235G1506 Durio zibethinus HOM05D008135 ORTHO05D010260 1.1e-13 80.1 75 61.3
CSS0040576 Camellia sinensis var. sinensis HOM05D008135 ORTHO05D010260 1.4e-13 79.7 72 63.9
Glyma.08G196600 Glycine max HOM05D008135 ORTHO05D010260 1.4e-13 79.7 73 60.3
Sopen03g040150 Solanum pennellii HOM05D008135 ORTHO05D010260 1.4e-13 79.7 59 67.8
Actinidia32128 Actinidia chinensis HOM05D008135 ORTHO05D010260 1.8e-13 79.3 54 79.6
Gohir.A10G062350 Gossypium hirsutum HOM05D008135 ORTHO05D010260 3.1e-13 78.6 76 57.9
QL05p015735 Quercus lobata HOM05D008135 ORTHO05D010260 3.1e-13 78.6 69 62.3
FAN05G3342 Fragaria x ananassa HOM05D008135 ORTHO05D010260 4.0e-13 78.2 70 62.9
Cpa.g.sc131.24 Carica papaya HOM05D008135 ORTHO05D010260 6.8e-13 77.4 75 58.7
DCAR_007606 Daucus carota HOM05D008135 ORTHO05D010260 6.8e-13 77.4 69 62.3
Gorai.011G068000 Gossypium raimondii HOM05D008135 ORTHO05D010260 6.8e-13 77.4 76 57.9
TAR624G1313 Trochodendron aralioides HOM05D008135 ORTHO05D010260 6.8e-13 77.4 69 58.0
Lalb_Chr25g0280561 Lupinus albus HOM05D008135 ORTHO05D010260 8.9e-13 77.0 73 58.9
Actinidia21739 Actinidia chinensis HOM05D008135 ORTHO05D010260 1.2e-12 76.6 71 60.6
FvH4_6g32890 Fragaria vesca HOM05D008135 ORTHO05D010260 1.2e-12 76.6 71 60.6
Gohir.D10G064050 Gossypium hirsutum HOM05D008135 ORTHO05D010260 2.0e-12 75.9 76 56.6
Nitab4.5_0004848g0120 Nicotiana tabacum HOM05D008135 ORTHO05D010260 2.0e-12 75.9 56 67.9
COL.COLO4_30598 Corchorus olitorius HOM05D008135 ORTHO05D010260 2.6e-12 75.5 78 55.1
ECA232G1244 Erigeron canadensis HOM05D008135 ORTHO05D010260 2.6e-12 75.5 50 78.0
Medtr8g015560 Medicago truncatula HOM05D008135 ORTHO05D010260 2.6e-12 75.5 74 58.1
Gohir.D05G135300 Gossypium hirsutum HOM05D008135 ORTHO05D010260 3.4e-12 75.1 71 57.7
FAN02G1144 Fragaria x ananassa HOM05D008135 ORTHO05D010260 4.4e-12 74.7 71 60.6
Gohir.A05G133400 Gossypium hirsutum HOM05D008135 ORTHO05D010260 7.5e-12 73.9 71 57.7
TAR383G0415 Trochodendron aralioides HOM05D008135 ORTHO05D010260 1.3e-11 73.2 72 54.2
Gorai.009G139100 Gossypium raimondii HOM05D008135 ORTHO05D010260 1.7e-11 72.8 71 56.3
arahy.Tifrunner.gnm1.ann1.4P5WGY Arachis hypogaea HOM05D008135 ORTHO05D010260 2.2e-11 72.4 74 58.1
DCAR_026371 Daucus carota HOM05D008135 ORTHO05D010260 2.2e-11 72.4 77 53.2
Psat4g194640 Pisum sativum HOM05D008135 ORTHO05D010260 2.2e-11 72.4 76 56.6
Migut.I00998 Erythranthe guttata HOM05D008135 ORTHO05D010260 3.7e-11 71.6 46 80.4
arahy.Tifrunner.gnm1.ann1.7STU2J Arachis hypogaea HOM05D008135 ORTHO05D010260 4.9e-11 71.2 74 58.1
MSTRG.11003 Avicennia marina HOM05D008135 ORTHO05D010260 6.4e-11 70.9 67 59.7
Eucgr.J02889 Eucalyptus grandis HOM05D008135 ORTHO05D010260 6.4e-11 70.9 73 54.8
Lj3g0018742 Lotus japonicus HOM05D008135 ORTHO05D010260 1.1e-10 70.1 71 59.2
ClCG09G000520 Citrullus lanatus HOM05D008135 ORTHO05D010260 1.4e-10 69.7 76 52.6
Atru.chr1.3625 Acer truncatum HOM05D008135 ORTHO05D010260 2.4e-10 68.9 85 50.6
CsaV3_7G034940 Cucumis sativus L. HOM05D008135 ORTHO05D010260 3.2e-10 68.6 76 52.6
unitig_88.g27599 Utricularia gibba HOM05D008135 ORTHO05D010260 4.1e-10 68.2 78 48.7
MELO3C024405.2 Cucumis melo HOM05D008135 ORTHO05D010260 7.1e-10 67.4 76 51.3
Sed0004354 Sechium edule HOM05D008135 ORTHO05D010260 3.5e-09 65.1 78 50.0
Nn8g38941 Nelumbo nucifera HOM05D008135 ORTHO05D010260 6.0e-09 64.3 55 60.0
Aqoxy2G03851 Aquilegia oxysepala HOM05D008135 ORTHO05D010260 1.9e-07 59.3 57 57.9
MBI01_g16574_MAGBIO Magnolia biondii HOM05D008135 ORTHO05D010260 3.3e-07 58.5 70 52.9
THA.LOC109116552 Tarenaya hassleriana HOM05D008135 ORTHO05D010260 9.5e-07 57.0 56 55.4
Os01g0558700 Oryza sativa ssp. japonica HOM05D008135 ORTHO05D010260 1.6e-06 56.2 58 55.2


User provided reference genes

Program Settings