Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra01G0133400 Salix brachista HOM05D008099 ORTHO05D010084 9.8e-59 229.9 118 100.0
Potri.001G158100 Populus trichocarpa HOM05D008099 ORTHO05D010084 2.6e-43 178.7 118 82.2
Potri.003G076700 Populus trichocarpa HOM05D008099 ORTHO05D010084 3.1e-36 155.2 118 73.7
Manes.01G080400 Manihot esculenta HOM05D008099 ORTHO05D010084 8.1e-21 104.0 121 52.1
Thecc.03G251800 Theobroma cacao HOM05D008099 ORTHO05D010084 1.8e-20 102.8 119 53.8
Gohir.A12G217300 Gossypium hirsutum HOM05D008099 ORTHO05D010084 2.4e-20 102.4 118 51.7
Cpa.g.sc29.154 Carica papaya HOM05D008099 ORTHO05D010084 3.1e-20 102.1 118 50.8
COL.COLO4_37181 Corchorus olitorius HOM05D008099 ORTHO05D010084 4.0e-20 101.7 124 50.0
CiPaw.12G109700 Carya illinoinensis HOM05D008099 ORTHO05D010084 6.9e-20 100.9 118 52.5
Gorai.004G198900 Gossypium raimondii HOM05D008099 ORTHO05D010084 6.9e-20 100.9 121 47.9
Gohir.D12G219832 Gossypium hirsutum HOM05D008099 ORTHO05D010084 9.9e-19 97.1 118 49.2
Gorai.008G235500 Gossypium raimondii HOM05D008099 ORTHO05D010084 1.3e-18 96.7 118 48.3
TWI60G1554 Tripterygium wilfordii HOM05D008099 ORTHO05D010084 6.4e-18 94.4 118 47.5
Actinidia05205 Actinidia chinensis HOM05D008099 ORTHO05D010084 8.4e-18 94.0 122 47.5
Ciclev10022924m.g Citrus clementina HOM05D008099 ORTHO05D010084 1.1e-17 93.6 121 50.4
TAR374G1517 Trochodendron aralioides HOM05D008099 ORTHO05D010084 2.4e-17 92.4 118 50.0
Rhsim07G0108300 Rhododendron simsii HOM05D008099 ORTHO05D010084 5.4e-17 91.3 122 43.4
Atru.chr9.1318 Acer truncatum HOM05D008099 ORTHO05D010084 3.5e-16 88.6 118 45.8
RcHm_v2.0_Chr7g0203191 Rosa chinensis HOM05D008099 ORTHO05D010084 1.3e-15 86.7 134 44.8
Sc22g0000850 Simmondsia chinensis HOM05D008099 ORTHO05D010084 5.1e-15 84.7 105 51.4
TAR627G0883 Trochodendron aralioides HOM05D008099 ORTHO05D010084 8.7e-15 84.0 118 45.8
TAR624G1172 Trochodendron aralioides HOM05D008099 ORTHO05D010084 2.5e-14 82.4 118 43.2
Cfa012714 Carpinus fangiana HOM05D008099 ORTHO05D010084 7.4e-14 80.9 119 47.1
FAN04G2136 Fragaria x ananassa HOM05D008099 ORTHO05D010084 7.4e-14 80.9 138 40.6
FAN08G3271 Fragaria x ananassa HOM05D008099 ORTHO05D010084 1.3e-13 80.1 137 40.9
CiPaw.11G154100 Carya illinoinensis HOM05D008099 ORTHO05D010084 2.1e-13 79.3 119 47.1
FAN18G4449 Fragaria x ananassa HOM05D008099 ORTHO05D010084 2.1e-13 79.3 141 39.7
Hma1.2p1_0316F.1_g123190 Hydrangea macrophylla HOM05D008099 ORTHO05D010084 3.7e-13 78.6 118 40.7
Prupe.5G069300 Prunus persica HOM05D008099 ORTHO05D010084 6.2e-13 77.8 125 42.4
PGSC0003DMG400012531 Solanum tuberosum HOM05D008099 ORTHO05D010084 6.2e-13 77.8 125 40.0
PGSC0003DMG400013812 Solanum tuberosum HOM05D008099 ORTHO05D010084 6.2e-13 77.8 119 42.9
FAN18G2867 Fragaria x ananassa HOM05D008099 ORTHO05D010084 1.1e-12 77.0 141 39.0
Nn6g33963 Nelumbo nucifera HOM05D008099 ORTHO05D010084 1.1e-12 77.0 116 46.6
FvH4_5g18850 Fragaria vesca HOM05D008099 ORTHO05D010084 1.4e-12 76.6 142 38.7
Gohir.D03G162700 Gossypium hirsutum HOM05D008099 ORTHO05D010084 1.4e-12 76.6 124 46.8
Solyc08g007375.1 Solanum lycopersicum HOM05D008099 ORTHO05D010084 1.4e-12 76.6 125 40.0
Sopen08g003320 Solanum pennellii HOM05D008099 ORTHO05D010084 1.4e-12 76.6 125 40.0
Gohir.A03G008200 Gossypium hirsutum HOM05D008099 ORTHO05D010084 3.1e-12 75.5 124 46.8
Manes.10G147300 Manihot esculenta HOM05D008099 ORTHO05D010084 3.1e-12 75.5 122 44.3
Nn8g39479 Nelumbo nucifera HOM05D008099 ORTHO05D010084 4.0e-12 75.1 116 44.0
Gorai.003G171300 Gossypium raimondii HOM05D008099 ORTHO05D010084 5.3e-12 74.7 124 46.0
MD04G1064000 Malus domestica HOM05D008099 ORTHO05D010084 5.3e-12 74.7 122 38.5
DCAR_004951 Daucus carota HOM05D008099 ORTHO05D010084 9.0e-12 73.9 119 41.2
PGSC0003DMG400035312 Solanum tuberosum HOM05D008099 ORTHO05D010084 9.0e-12 73.9 119 42.0
Solyc06g060675.1 Solanum lycopersicum HOM05D008099 ORTHO05D010084 4.5e-11 71.6 119 41.2
Sopen06g020800 Solanum pennellii HOM05D008099 ORTHO05D010084 4.5e-11 71.6 119 41.2
Gohir.A08G170632 Gossypium hirsutum HOM05D008099 ORTHO05D010084 2.9e-10 68.9 71 53.5
Gohir.D08G188832 Gossypium hirsutum HOM05D008099 ORTHO05D010084 2.9e-10 68.9 71 53.5
Oeu019597.1 Olea europaea HOM05D008099 ORTHO05D010084 2.9e-10 68.9 119 42.9
Migut.N00880 Erythranthe guttata HOM05D008099 ORTHO05D010084 3.8e-10 68.6 90 42.2
Eucgr.D02077 Eucalyptus grandis HOM05D008099 ORTHO05D010084 3.8e-10 68.6 127 37.8
Hma1.2p1_0316F.1_g123200 Hydrangea macrophylla HOM05D008099 ORTHO05D010084 3.8e-10 68.6 118 39.0
Aqoxy7G00810 Aquilegia oxysepala HOM05D008099 ORTHO05D010084 4.9e-10 68.2 115 40.0
Cc08_g12470 Coffea canephora HOM05D008099 ORTHO05D010084 4.9e-10 68.2 120 35.8
SalBow6G1675 Salvia bowleyana HOM05D008099 ORTHO05D010084 8.4e-10 67.4 116 42.2
Glyma.01G209700 Glycine max HOM05D014042 ORTHO05D016237 1.9e-09 66.2 122 38.5
Lj4g0008633 Lotus japonicus HOM05D014042 ORTHO05D016237 7.1e-09 64.3 122 42.6
Lsat_1_v5_gn_6_91081 Lactuca sativa HOM05D008099 ORTHO05D010084 2.1e-08 62.8 120 37.5
ECA233G2908 Erigeron canadensis HOM05D008099 ORTHO05D010084 2.7e-08 62.4 117 35.0
DCAR_008490 Daucus carota HOM05D008099 ORTHO05D010084 3.5e-08 62.0 118 34.7
COL.COLO4_37180 Corchorus olitorius HOM05D030758 ORTHO05D010084 6.0e-08 61.2 118 38.1
SGA_v2.0_scaffold52G19121 Striga asiatica HOM05D002583 ORTHO05D002776 1.8e-07 59.7 106 37.7
Glyma.17G141400 Glycine max HOM05D014042 ORTHO05D016237 2.3e-07 59.3 120 39.2
Phvul.002G062900 Phaseolus vulgaris HOM05D014042 ORTHO05D016237 5.1e-07 58.2 123 33.3
Ca_21963_v3 Cicer arietinum L. HOM05D014042 ORTHO05D016237 8.7e-07 57.4 127 39.4
VMungo1215G2140 Vigna mungo HOM05D014042 ORTHO05D016237 1.1e-06 57.0 123 35.0
Lsat_1_v5_gn_3_841 Lactuca sativa HOM05D008099 ORTHO05D010084 2.5e-06 55.8 123 33.3
Ah.12g056830 Amaranthus hybridus HOM05D054031 ORTHO05D010084 4.3e-06 55.1 126 38.9
TAR176G0002 Trochodendron aralioides HOM05D008099 ORTHO05D010084 4.3e-06 55.1 85 40.0
DCAR_027775 Daucus carota HOM05D008099 ORTHO05D010084 5.6e-06 54.7 119 34.5


User provided reference genes

Program Settings