Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra01G0131200 Salix brachista HOM05D006671 ORTHO05D008637 0.0e+00 1437.9 718 100.0
Potri.001G161100 Populus trichocarpa HOM05D006671 ORTHO05D008637 9.6e-274 946.8 574 83.4
Manes.11G010600 Manihot esculenta HOM05D006671 ORTHO05D008637 1.1e-208 730.7 581 63.9
Ciclev10025368m.g Citrus clementina HOM05D006671 ORTHO05D008637 5.7e-186 655.2 576 59.9
Duzib160G0342 Durio zibethinus HOM05D006671 ORTHO05D008637 5.7e-186 655.2 581 58.5
Thecc.06G048900 Theobroma cacao HOM05D006671 ORTHO05D008637 7.0e-184 648.3 581 58.2
COL.COLO4_26801 Corchorus olitorius HOM05D006671 ORTHO05D008637 8.6e-182 641.3 578 58.0
Atru.chr1.4182 Acer truncatum HOM05D006671 ORTHO05D008637 1.5e-181 640.6 578 59.3
Gohir.D13G119900 Gossypium hirsutum HOM05D006671 ORTHO05D008637 1.2e-180 637.5 580 56.4
Gorai.013G134300 Gossypium raimondii HOM05D006671 ORTHO05D008637 1.0e-179 634.4 580 56.4
CiPaw.03G010100 Carya illinoinensis HOM05D006671 ORTHO05D008637 4.4e-178 629.0 582 56.7
CSS0038482 Camellia sinensis var. sinensis HOM05D006671 ORTHO05D008637 4.1e-176 622.5 574 56.8
MD09G1171100 Malus domestica HOM05D006671 ORTHO05D008637 8.1e-172 608.2 578 56.4
TAR623G0926 Trochodendron aralioides HOM05D006671 ORTHO05D008637 1.8e-171 607.1 582 55.2
TWI59G0357 Tripterygium wilfordii HOM05D006671 ORTHO05D008637 6.8e-171 605.1 579 57.2
CANSAT56G3116 Cannabis sativa HOM05D006671 ORTHO05D008637 2.0e-170 603.6 579 55.3
Rhsim08G0246200 Rhododendron simsii HOM05D006671 ORTHO05D008637 6.4e-169 598.6 588 53.4
TPR.G26443 Trifolium pratense HOM05D006671 ORTHO05D008637 6.4e-169 598.6 580 55.5
Prupe.3G029600 Prunus persica HOM05D006671 ORTHO05D008637 1.4e-168 597.4 575 55.8
Phvul.010G121800 Phaseolus vulgaris HOM05D006671 ORTHO05D008637 2.4e-168 596.7 585 54.0
Eucgr.I02172 Eucalyptus grandis HOM05D006671 ORTHO05D008637 4.1e-168 595.9 578 55.0
Thhalv10011378m.g Eutrema salsugineum HOM05D006671 ORTHO05D008637 1.6e-167 594.0 572 53.5
RcHm_v2.0_Chr2g0148251 Rosa chinensis HOM05D006671 ORTHO05D008637 2.1e-167 593.6 570 56.5
AT1G53710 Arabidopsis thaliana HOM05D006671 ORTHO05D008637 7.8e-167 591.7 575 52.5
Glyma.16G015100 Glycine max HOM05D006671 ORTHO05D008637 2.3e-166 590.1 586 53.9
Lalb_Chr10g0101031 Lupinus albus HOM05D006671 ORTHO05D008637 3.9e-166 589.3 583 53.7
AL1G62410 Arabidopsis lyrata HOM05D006671 ORTHO05D008637 6.6e-166 588.6 578 52.4
Glyma.07G047100 Glycine max HOM05D006671 ORTHO05D008637 6.6e-166 588.6 583 53.9
Carub.0001s4299 Capsella rubella HOM05D006671 ORTHO05D008637 1.1e-165 587.8 575 52.2
Aa31LG10G1550 Aethionema arabicum HOM05D006671 ORTHO05D008637 3.3e-165 586.3 575 53.2
Sp1g40250 Schrenkiella parvula HOM05D006671 ORTHO05D008637 6.2e-164 582.0 571 52.5
Haze_14039 Corylus avellana HOM05D006671 ORTHO05D008637 8.1e-164 581.6 672 49.7
Lj3g0013980 Lotus japonicus HOM05D006671 ORTHO05D008637 8.1e-164 581.6 594 52.5
vmacro18708 Vaccinium macrocarpon HOM05D006671 ORTHO05D008637 1.8e-163 580.5 577 52.2
Actinidia24409 Actinidia chinensis HOM05D006671 ORTHO05D008637 5.2e-163 578.9 554 54.5
Psat4g165440 Pisum sativum HOM05D006671 ORTHO05D008637 2.0e-162 577.0 584 53.9
PGR119G0898 Punica granatum HOM05D006671 ORTHO05D008637 5.8e-162 575.5 583 52.8
Cpa.g.sc229.10 Carica papaya HOM05D006671 ORTHO05D008637 1.3e-161 574.3 584 53.1
Nn8g41287 Nelumbo nucifera HOM05D006671 ORTHO05D008637 2.2e-161 573.5 576 53.0
BolC3t21495H Brassica oleracea HOM05D006671 ORTHO05D008637 4.1e-160 569.3 571 51.7
Medtr8g023620 Medicago truncatula HOM05D006671 ORTHO05D008637 9.2e-160 568.2 584 53.1
CARHR044010 Cardamine hirsuta HOM05D006671 ORTHO05D008637 1.2e-159 567.8 571 51.3
BcaC01g01410 Brassica carinata HOM05D006671 ORTHO05D008637 6.0e-159 565.5 572 51.4
BcaB04g17063 Brassica carinata HOM05D006671 ORTHO05D008637 7.8e-159 565.1 571 51.0
C03p91740 Brassica napus HOM05D006671 ORTHO05D008637 2.3e-158 563.5 572 51.2
Aqoxy2G04033 Aquilegia oxysepala HOM05D006671 ORTHO05D008637 6.6e-158 562.0 576 52.4
A08p01430 Brassica napus HOM05D006671 ORTHO05D008637 6.6e-158 562.0 571 51.5
BraA08t32194Z Brassica rapa HOM05D006671 ORTHO05D008637 1.9e-157 560.5 572 51.4
SalBow7G2314 Salvia bowleyana HOM05D006671 ORTHO05D008637 7.3e-157 558.5 568 51.8
arahy.Tifrunner.gnm1.ann1.NMV212 Arachis hypogaea HOM05D006671 ORTHO05D008637 1.6e-156 557.4 583 51.1
Sopen12g024210 Solanum pennellii HOM05D006671 ORTHO05D008637 1.6e-156 557.4 572 52.1
arahy.Tifrunner.gnm1.ann1.YS0GDU Arachis hypogaea HOM05D006671 ORTHO05D008637 3.6e-156 556.2 583 51.1
CAN.G390.42 Capsicum annuum HOM05D006671 ORTHO05D008637 6.2e-156 555.4 572 51.7
FvH4_6g36250 Fragaria vesca HOM05D006671 ORTHO05D008637 8.1e-156 555.1 573 53.1
PGSC0003DMG402028844 Solanum tuberosum HOM05D006671 ORTHO05D008637 1.1e-155 554.7 574 52.3
FAN14G1234 Fragaria x ananassa HOM05D006671 ORTHO05D008637 3.1e-155 553.1 573 52.9
MSTRG.9549 Avicennia marina HOM05D006671 ORTHO05D008637 6.9e-155 552.0 568 53.2
Migut.D00903 Erythranthe guttata HOM05D006671 ORTHO05D008637 6.9e-155 552.0 575 50.4
PSO017G0187 Papaver somniferum HOM05D006671 ORTHO05D008637 5.8e-154 548.9 584 52.4
Sc12g0010960 Simmondsia chinensis HOM05D006671 ORTHO05D008637 7.6e-154 548.5 574 50.9
Solyc12g055740.2 Solanum lycopersicum HOM05D006671 ORTHO05D008637 2.2e-153 547.0 572 51.6
Cc04_g00530 Coffea canephora HOM05D006671 ORTHO05D008637 6.4e-153 545.4 584 50.2
ECA234G0268 Erigeron canadensis HOM05D006671 ORTHO05D008637 1.4e-152 544.3 573 51.8
EL10Ac7g18235 Beta vulgaris HOM05D006671 ORTHO05D008637 4.6e-151 539.3 578 50.5
PGSC0003DMG401028844 Solanum tuberosum HOM05D006671 ORTHO05D008637 4.6e-151 539.3 573 51.3
DCAR_007665 Daucus carota HOM05D006671 ORTHO05D008637 2.3e-150 537.0 597 47.9
FAN09G2187 Fragaria x ananassa HOM05D006671 ORTHO05D008637 1.1e-149 534.6 573 51.5
Lj5C27T5 Lonicera japonica HOM05D006671 ORTHO05D008637 1.5e-149 534.3 536 52.6
HPP92_002242 Vanilla planifolia HOM05D006671 ORTHO05D008637 3.4e-146 523.1 578 49.5
MBI13_g05970_MAGBIO Magnolia biondii HOM05D006671 ORTHO05D008637 1.7e-145 520.8 533 53.5
PSO170G0973 Papaver somniferum HOM05D006671 ORTHO05D008637 5.4e-144 515.8 526 53.2
GSVIVG01026409001 Vitis vinifera HOM05D006671 ORTHO05D008637 5.4e-144 515.8 754 42.2
HanXRQChr10g0311581 Helianthus annuus HOM05D006671 ORTHO05D008637 2.7e-143 513.5 578 49.5
CDE06G0010 Ceratophyllum demersum HOM05D006671 ORTHO05D008637 1.0e-142 511.5 540 51.7
SGA_v2.0_scaffold4G02101 Striga asiatica HOM05D006671 ORTHO05D008637 8.7e-142 508.4 570 49.5
Lsat_1_v5_gn_5_137600 Lactuca sativa HOM05D006671 ORTHO05D008637 3.7e-140 503.1 571 48.7
Os03g0397300 Oryza sativa ssp. japonica HOM05D006671 ORTHO05D008637 6.2e-140 502.3 578 47.1
FAN14G2634 Fragaria x ananassa HOM05D006671 ORTHO05D008637 1.1e-139 501.5 573 50.4
Zm00001eb392730 Zea mays HOM05D006671 ORTHO05D008637 2.9e-137 493.4 578 47.2
Ah.08g217540 Amaranthus hybridus HOM05D006671 ORTHO05D008637 6.0e-135 485.7 570 48.1
Dinv20369 Davidia involucrata HOM05D006671 ORTHO05D008637 3.9e-134 483.0 423 57.9
AUR62001377 Chenopodium quinoa HOM05D006671 ORTHO05D008637 6.7e-134 482.3 530 49.8
AUR62044064 Chenopodium quinoa HOM05D006671 ORTHO05D008637 4.5e-130 469.5 513 50.5
Actinidia33812 Actinidia chinensis HOM05D006671 ORTHO05D008637 9.3e-128 461.8 571 46.8
Nitab4.5_0003469g0010 Nicotiana tabacum HOM05D006671 ORTHO05D008637 9.3e-128 461.8 505 50.1
unitig_699.g19656 Utricularia gibba HOM05D006671 ORTHO05D001254 1.2e-122 444.9 582 44.3
Nitab4.5_0000357g0220 Nicotiana tabacum HOM05D006671 ORTHO05D008637 1.4e-120 438.0 572 45.1
SEGI_35568 Sequoiadendron giganteum HOM05D006671 ORTHO05D008637 1.9e-120 437.6 496 48.0
Pp3c21_8010 Physcomitrium patens HOM05D006671 ORTHO05D008637 5.2e-102 376.3 580 39.0
Peaxi162Scf00177g00616 Petunia axillaris HOM05D006671 ORTHO05D008637 8.8e-102 375.6 575 40.9
AagrBONN_evm.TU.Sc2ySwM_362.1979 Anthoceros agrestis HOM05D006671 ORTHO05D008637 1.1e-96 358.6 577 39.0
SMO347G0345 Selaginella moellendorffii HOM05D006671 ORTHO05D008637 3.2e-96 357.1 578 37.7
VMungo0331G0057 Vigna mungo HOM05D006671 ORTHO05D008637 3.0e-94 350.5 356 52.2
Ca_23471_v3 Cicer arietinum L. HOM05D006671 ORTHO05D008637 5.2e-94 349.7 509 42.2
THA.LOC104822767 Tarenaya hassleriana HOM05D006671 ORTHO05D008637 2.8e-92 344.0 391 48.8
QL03p047059 Quercus lobata HOM05D006671 ORTHO05D008637 1.6e-90 338.2 308 55.2
Hma1.2p1_1104F.1_g257490 Hydrangea macrophylla HOM05D006671 ORTHO05D008637 3.2e-88 330.5 301 55.5
QL03p047068 Quercus lobata HOM05D006671 ORTHO05D008637 2.2e-84 317.8 262 61.8
Hma1.2p1_1104F.1_g257500 Hydrangea macrophylla HOM05D006671 ORTHO05D008637 1.5e-77 295.0 253 60.5
Gohir.A13G116750 Gossypium hirsutum HOM05D006671 ORTHO05D008637 3.5e-74 283.9 206 64.6
Mapoly0048s0109 Marchantia polymorpha HOM05D006671 ORTHO05D008637 1.9e-72 278.1 579 32.5
Oeu006761.2 Olea europaea HOM05D006671 ORTHO05D008637 9.5e-72 275.8 266 54.5
FAN02G1271 Fragaria x ananassa HOM05D006671 ORTHO05D008637 1.3e-68 265.4 367 43.6
Gohir.A13G116801 Gossypium hirsutum HOM05D006671 ORTHO05D008637 1.3e-68 265.4 234 58.5
BcaNung02916 Brassica carinata HOM05D006671 ORTHO05D008637 4.1e-67 260.4 528 33.5
THA.LOC104803433 Tarenaya hassleriana HOM05D006671 ORTHO05D008637 9.5e-64 249.2 187 62.0
MD17G1156100 Malus domestica HOM05D006671 ORTHO05D008637 2.1e-55 221.5 485 34.4
ATR0006G018 Amborella trichopoda HOM05D006671 ORTHO05D008637 8.1e-55 219.5 255 49.8
SEGI_04788 Sequoiadendron giganteum HOM05D006671 ORTHO05D008637 3.4e-53 214.2 253 47.0
Actinidia21851 Actinidia chinensis HOM05D006671 ORTHO05D008637 4.6e-50 203.8 192 57.3
MCO09G741 Micromonas commoda HOM05D006671 ORTHO05D008637 2.2e-36 158.3 467 30.6
Hund05690 Selenicereus undatus HOM05D006671 ORTHO05D008637 1.9e-35 155.2 123 61.0
Actinidia21852 Actinidia chinensis HOM05D006671 ORTHO05D008637 6.6e-33 146.7 121 59.5
HPP92_002174 Vanilla planifolia HOM05D000872 ORTHO05D007886 3.6e-31 141.0 173 45.1
Cfa022026 Carpinus fangiana HOM05D002393 ORTHO05D123579 4.5e-21 107.5 495 27.3
Lsat_1_v5_gn_2_122021 Lactuca sativa HOM05D006671 ORTHO05D008637 7.1e-19 100.1 140 43.6
FAN05G4676 Fragaria x ananassa HOM05D006671 ORTHO05D008637 1.0e-17 96.3 98 57.1
C01p50010 Brassica napus HOM05D010519 ORTHO05D027459 2.6e-13 81.6 141 36.2
BolC1t04958H Brassica oleracea HOM05D010519 ORTHO05D027459 2.6e-13 81.6 141 36.2
BcaC09g48416 Brassica carinata HOM05D006671 ORTHO05D027459 1.7e-12 79.0 103 38.8
Lsat_1_v5_gn_2_91241 Lactuca sativa HOM05D006671 ORTHO05D011576 4.9e-12 77.4 89 43.8
Lsat_1_v5_gn_1_119700 Lactuca sativa HOM05D006671 ORTHO05D011576 1.4e-11 75.9 89 42.7
AUR62027724 Chenopodium quinoa HOM05D008167 ORTHO05D010296 1.9e-11 75.5 356 22.8
EL10Ac1g01257 Beta vulgaris HOM05D008167 ORTHO05D010296 6.0e-10 70.5 358 21.2
Lj4C719T5 Lonicera japonica HOM05D008167 ORTHO05D010296 3.0e-09 68.2 369 24.1
Potri.002G093800 Populus trichocarpa HOM05D008167 ORTHO05D010296 3.9e-09 67.8 355 23.4
Manes.02G154800 Manihot esculenta HOM05D008167 ORTHO05D010296 5.1e-09 67.4 428 22.2
PSO541G2703 Papaver somniferum HOM05D008167 ORTHO05D010296 1.1e-08 66.2 420 20.7
Lj4C716T9 Lonicera japonica HOM05D008167 ORTHO05D010296 5.7e-08 63.9 366 23.0
Pp3c20_15640 Physcomitrium patens HOM05D008167 ORTHO05D010296 7.4e-08 63.5 385 23.6
Lj3g0012000 Lotus japonicus HOM05D008167 ORTHO05D010296 1.3e-07 62.8 367 23.7
QL12p036142 Quercus lobata HOM05D008167 ORTHO05D010296 3.7e-07 61.2 430 22.3
Lsat_1_v5_gn_0_9700 Lactuca sativa HOM05D008167 ORTHO05D010296 8.2e-07 60.1 425 21.2
PSO133G0102 Papaver somniferum HOM05D008167 ORTHO05D010296 1.8e-06 58.9 417 19.9
arahy.Tifrunner.gnm1.ann1.R32LA5 Arachis hypogaea HOM05D008167 ORTHO05D010296 5.3e-06 57.4 409 22.0
TAR628G0982 Trochodendron aralioides HOM05D008167 ORTHO05D010296 5.3e-06 57.4 360 20.0
CSS0027715 Camellia sinensis var. sinensis HOM05D006671 ORTHO05D008637 6.9e-06 57.0 34 70.6


User provided reference genes

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