Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra01G0120600 Salix brachista HOM05D006150 ORTHO05D007745 2.0e-97 359.0 167 100.0
Potri.003G083600 Populus trichocarpa HOM05D006150 ORTHO05D007745 7.6e-41 171.0 162 59.3
Peaxi162Scf00301g00519 Petunia axillaris HOM05D006150 ORTHO05D007745 1.7e-40 169.9 162 58.0
vmacro00832 Vaccinium macrocarpon HOM05D006150 ORTHO05D007745 2.9e-40 169.1 173 56.1
PGSC0003DMG400026243 Solanum tuberosum HOM05D006150 ORTHO05D007745 1.1e-39 167.2 162 57.4
Ciclev10021365m.g Citrus clementina HOM05D006150 ORTHO05D007745 1.9e-39 166.4 163 56.4
Gorai.008G230800 Gossypium raimondii HOM05D006150 ORTHO05D007745 2.5e-39 166.0 162 56.8
Gohir.A12G212700 Gossypium hirsutum HOM05D006150 ORTHO05D007745 3.2e-39 165.6 162 56.8
Sopen08g026350 Solanum pennellii HOM05D006150 ORTHO05D007745 3.2e-39 165.6 162 57.4
Solyc08g077840.3 Solanum lycopersicum HOM05D006150 ORTHO05D007745 5.5e-39 164.9 162 56.8
CARHR223610 Cardamine hirsuta HOM05D006150 ORTHO05D007745 7.2e-39 164.5 162 57.4
HanXRQChr17g0534011 Helianthus annuus HOM05D006150 ORTHO05D007745 7.2e-39 164.5 162 58.0
PSO675G6476 Papaver somniferum HOM05D006150 ORTHO05D007745 7.2e-39 164.5 163 56.4
DCAR_008330 Daucus carota HOM05D006150 ORTHO05D007745 9.3e-39 164.1 164 55.5
Carub.0007s2437 Capsella rubella HOM05D006150 ORTHO05D007745 1.6e-38 163.3 162 57.4
Oeu012348.1 Olea europaea HOM05D006150 ORTHO05D007745 1.6e-38 163.3 162 56.8
TAR636G1440 Trochodendron aralioides HOM05D006150 ORTHO05D007745 1.6e-38 163.3 162 57.4
AL7G37660 Arabidopsis lyrata HOM05D006150 ORTHO05D007745 2.1e-38 162.9 162 56.8
Duzib084G0008 Durio zibethinus HOM05D006150 ORTHO05D007745 2.1e-38 162.9 162 56.2
Gohir.D12G215200 Gossypium hirsutum HOM05D006150 ORTHO05D007745 2.1e-38 162.9 162 55.6
GSVIVG01003685001 Vitis vinifera HOM05D006150 ORTHO05D007745 2.1e-38 162.9 163 56.4
Lj8A277T42 Lonicera japonica HOM05D006150 ORTHO05D007745 2.7e-38 162.5 162 55.6
CANSAT21G0710 Cannabis sativa HOM05D006150 ORTHO05D007745 3.6e-38 162.2 163 55.2
SalBow7G3619 Salvia bowleyana HOM05D006150 ORTHO05D007745 3.6e-38 162.2 161 55.9
MSTRG.6640 Avicennia marina HOM05D006150 ORTHO05D007745 4.6e-38 161.8 162 55.6
Atru.chr9.1206 Acer truncatum HOM05D006150 ORTHO05D007745 6.1e-38 161.4 163 55.2
BcaNung04656 Brassica carinata HOM05D006150 ORTHO05D007745 6.1e-38 161.4 162 56.8
AT4G17050 Arabidopsis thaliana HOM05D006150 ORTHO05D007745 7.9e-38 161.0 162 56.2
CAN.G572.11 Capsicum annuum HOM05D006150 ORTHO05D007745 7.9e-38 161.0 162 56.2
ECA234G2169 Erigeron canadensis HOM05D006150 ORTHO05D007745 7.9e-38 161.0 162 56.2
Nn6g33757 Nelumbo nucifera HOM05D006150 ORTHO05D007745 7.9e-38 161.0 162 56.8
Prupe.5G055300 Prunus persica HOM05D006150 ORTHO05D007745 7.9e-38 161.0 163 55.2
Sp7g17140 Schrenkiella parvula HOM05D006150 ORTHO05D007745 7.9e-38 161.0 162 56.8
BolC1t02493H Brassica oleracea HOM05D006150 ORTHO05D007745 1.0e-37 160.6 160 56.2
COL.COLO4_07285 Corchorus olitorius HOM05D006150 ORTHO05D007745 1.0e-37 160.6 162 55.6
Eucgr.D02133 Eucalyptus grandis HOM05D006150 ORTHO05D007745 1.0e-37 160.6 163 54.6
PSO732G0290 Papaver somniferum HOM05D006150 ORTHO05D007745 1.0e-37 160.6 163 55.2
Rhsim07G0136400 Rhododendron simsii HOM05D006150 ORTHO05D007745 1.0e-37 160.6 162 56.2
Thecc.03G240100 Theobroma cacao HOM05D006150 ORTHO05D007745 1.0e-37 160.6 162 55.6
QL12p008732 Quercus lobata HOM05D006150 ORTHO05D007745 1.4e-37 160.2 162 54.9
A03p50280 Brassica napus HOM05D006150 ORTHO05D007745 1.8e-37 159.8 162 56.2
C07p48460 Brassica napus HOM05D006150 ORTHO05D007745 1.8e-37 159.8 162 56.2
C07p48520 Brassica napus HOM05D006150 ORTHO05D007745 1.8e-37 159.8 162 56.2
BolC7t45360H Brassica oleracea HOM05D006150 ORTHO05D007745 1.8e-37 159.8 162 56.2
BraA01t01953Z Brassica rapa HOM05D006150 ORTHO05D007745 1.8e-37 159.8 162 55.6
BraA03t14117Z Brassica rapa HOM05D006150 ORTHO05D007745 1.8e-37 159.8 162 56.2
Hma1.2p1_0570F.1_g180430 Hydrangea macrophylla HOM05D006150 ORTHO05D007745 1.8e-37 159.8 161 55.3
MD06G1047100 Malus domestica HOM05D006150 ORTHO05D007745 1.8e-37 159.8 146 58.2
RcHm_v2.0_Chr7g0205681 Rosa chinensis HOM05D006150 ORTHO05D007745 1.8e-37 159.8 163 55.2
Manes.01G089000 Manihot esculenta HOM05D006150 ORTHO05D007745 2.3e-37 159.5 162 56.2
Thhalv10026866m.g Eutrema salsugineum HOM05D006150 ORTHO05D007745 3.0e-37 159.1 157 58.0
FAN04G1813 Fragaria x ananassa HOM05D006150 ORTHO05D007745 3.0e-37 159.1 162 55.6
MBI04_g13858_MAGBIO Magnolia biondii HOM05D006150 ORTHO05D007745 3.0e-37 159.1 161 55.3
FvH4_5g20400 Fragaria vesca HOM05D006150 ORTHO05D007745 3.9e-37 158.7 162 55.6
Glyma.05G066500 Glycine max HOM05D006150 ORTHO05D007745 3.9e-37 158.7 162 53.7
Glyma.17G148400 Glycine max HOM05D006150 ORTHO05D007745 3.9e-37 158.7 162 53.7
Phvul.003G225600 Phaseolus vulgaris HOM05D006150 ORTHO05D007745 3.9e-37 158.7 162 53.1
THA.LOC104807929 Tarenaya hassleriana HOM05D006150 ORTHO05D007745 3.9e-37 158.7 161 55.3
VMungo0251G1767 Vigna mungo HOM05D006150 ORTHO05D007745 3.9e-37 158.7 162 53.7
Haze_08363 Corylus avellana HOM05D006150 ORTHO05D007745 5.1e-37 158.3 163 54.6
Medtr4g099290 Medicago truncatula HOM05D006150 ORTHO05D007745 5.1e-37 158.3 162 54.9
PGR031G0533 Punica granatum HOM05D006150 ORTHO05D007745 5.1e-37 158.3 162 54.9
TWI60G0542 Tripterygium wilfordii HOM05D006150 ORTHO05D007745 5.1e-37 158.3 161 54.7
CSS0019555 Camellia sinensis var. sinensis HOM05D006150 ORTHO05D007745 6.7e-37 157.9 162 54.3
Cfa012327 Carpinus fangiana HOM05D006150 ORTHO05D007745 6.7e-37 157.9 162 54.9
CiPaw.11G072300 Carya illinoinensis HOM05D006150 ORTHO05D007745 6.7e-37 157.9 163 54.0
Cc08_g11330 Coffea canephora HOM05D006150 ORTHO05D007745 6.7e-37 157.9 162 55.6
PSO732G0039 Papaver somniferum HOM05D006150 ORTHO05D007745 6.7e-37 157.9 163 54.0
Sed0022790 Sechium edule HOM05D006150 ORTHO05D007745 6.7e-37 157.9 162 53.7
BcaNung00130 Brassica carinata HOM05D006150 ORTHO05D007745 8.8e-37 157.5 162 54.9
MD04G1055500 Malus domestica HOM05D006150 ORTHO05D007745 8.8e-37 157.5 163 54.0
arahy.Tifrunner.gnm1.ann1.IPM3U6 Arachis hypogaea HOM05D006150 ORTHO05D007745 1.1e-36 157.1 162 53.7
BcaC06g33538 Brassica carinata HOM05D006150 ORTHO05D007745 1.5e-36 156.8 162 55.6
TPR.G25747 Trifolium pratense HOM05D006150 ORTHO05D007745 1.5e-36 156.8 162 54.3
AUR62018839 Chenopodium quinoa HOM05D006150 ORTHO05D007745 1.9e-36 156.4 162 53.1
CsaV3_3G004750 Cucumis sativus L. HOM05D006150 ORTHO05D007745 3.3e-36 155.6 162 53.1
AUR62007167 Chenopodium quinoa HOM05D006150 ORTHO05D007745 4.3e-36 155.2 162 53.7
ClCG10G005070 Citrullus lanatus HOM05D006150 ORTHO05D007745 4.3e-36 155.2 162 52.5
Lj4g0002003 Lotus japonicus HOM05D006150 ORTHO05D007745 4.3e-36 155.2 162 54.9
Os07g0495000 Oryza sativa ssp. japonica HOM05D006150 ORTHO05D007745 7.4e-36 154.5 162 53.7
EL10Ac5g12270 Beta vulgaris HOM05D006150 ORTHO05D007745 9.7e-36 154.1 162 53.1
SGA_v2.0_scaffold181G39680 Striga asiatica HOM05D006150 ORTHO05D007745 9.7e-36 154.1 171 52.6
Aqoxy5G02622 Aquilegia oxysepala HOM05D006150 ORTHO05D007745 1.3e-35 153.7 163 52.1
Lalb_Chr09g0329771 Lupinus albus HOM05D006150 ORTHO05D007745 1.3e-35 153.7 162 53.7
Ca_22017_v3 Cicer arietinum L. HOM05D006150 ORTHO05D007745 1.7e-35 153.3 162 54.3
arahy.Tifrunner.gnm1.ann1.YY6LCE Arachis hypogaea HOM05D006150 ORTHO05D007745 2.2e-35 152.9 162 53.1
ATR0665G013 Amborella trichopoda HOM05D006150 ORTHO05D007745 6.3e-35 151.4 162 52.5
Ah.12g053980 Amaranthus hybridus HOM05D006150 ORTHO05D007745 1.1e-34 150.6 161 52.2
C07p48390 Brassica napus HOM05D006150 ORTHO05D007745 1.1e-34 150.6 162 54.9
Aa31LG2G13130 Aethionema arabicum HOM05D006150 ORTHO05D007745 2.4e-34 149.4 186 48.4
HPP92_025744 Vanilla planifolia HOM05D006150 ORTHO05D007745 2.4e-34 149.4 162 53.1
FAN08G0760 Fragaria x ananassa HOM05D006150 ORTHO05D007745 6.9e-34 147.9 155 54.2
unitig_746.g26644 Utricularia gibba HOM05D006150 ORTHO05D007745 4.5e-33 145.2 161 50.9
Zm00001eb322060 Zea mays HOM05D006150 ORTHO05D007745 1.0e-32 144.1 161 52.2
SEGI_33649 Sequoiadendron giganteum HOM05D006150 ORTHO05D007745 1.3e-32 143.7 161 50.9
CDE12G0966 Ceratophyllum demersum HOM05D006150 ORTHO05D007745 5.0e-32 141.7 162 51.2
Nitab4.5_0000500g0240 Nicotiana tabacum HOM05D006150 ORTHO05D007745 5.5e-31 138.3 162 50.6
A01p20260 Brassica napus HOM05D006150 ORTHO05D007745 7.2e-31 137.9 149 53.7
Mapoly0072s0097 Marchantia polymorpha HOM05D006150 ORTHO05D007745 1.2e-30 137.1 155 49.7
Nitab4.5_0009451g0030 Nicotiana tabacum HOM05D006150 ORTHO05D007745 1.6e-30 136.7 162 50.0
Actinidia02195 Actinidia chinensis HOM05D006150 ORTHO05D007745 3.6e-30 135.6 122 58.2
Dinv28876 Davidia involucrata HOM05D006150 ORTHO05D007745 1.0e-29 134.0 162 48.8
Psat4g076080 Pisum sativum HOM05D006150 ORTHO05D007745 6.7e-29 131.3 122 56.6
Sc01g0007980 Simmondsia chinensis HOM05D006150 ORTHO05D007745 1.5e-28 130.2 121 55.4
Pp3c9_12580 Physcomitrium patens HOM05D006150 ORTHO05D007745 1.7e-27 126.7 151 48.3
Lsat_1_v5_gn_3_15361 Lactuca sativa HOM05D006150 ORTHO05D007745 4.5e-25 118.6 138 51.4
AagrBONN_evm.TU.Sc2ySwM_228.2274 Anthoceros agrestis HOM05D006150 ORTHO05D007745 7.7e-25 117.9 143 49.0
BcaC09g50439 Brassica carinata HOM05D006150 ORTHO05D007745 2.7e-22 109.4 162 43.8
C01p25410 Brassica napus HOM05D006150 ORTHO05D007745 2.7e-22 109.4 162 43.8
MCO07G379 Micromonas commoda HOM05D006150 ORTHO05D007745 2.7e-22 109.4 153 40.5
Cre06.g290000 Chlamydomonas reinhardtii HOM05D006150 ORTHO05D007745 4.7e-22 108.6 151 42.4
CSS0048254 Camellia sinensis var. sinensis HOM05D006150 ORTHO05D007745 8.0e-22 107.8 79 68.4
Actinidia25909 Actinidia chinensis HOM05D006150 ORTHO05D007745 1.8e-18 96.7 134 46.3
MELO3C014174.2 Cucumis melo HOM05D006150 ORTHO05D007745 5.9e-17 91.7 131 44.3
MCO04G282 Micromonas commoda HOM05D006150 ORTHO05D007745 1.3e-16 90.5 156 37.8
Cpa.g.sc98.38 Carica papaya HOM05D006150 ORTHO05D007745 1.4e-13 80.5 72 58.3
CBR_g38093 Chara braunii HOM05D006150 ORTHO05D007745 1.5e-12 77.0 66 60.6


User provided reference genes

Program Settings