Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra01G0114700 Salix brachista HOM05D010448 ORTHO05D012537 1.6e-235 818.9 388 100.0
Potri.001G146000 Populus trichocarpa HOM05D010448 ORTHO05D012537 3.8e-184 648.3 388 79.9
Potri.001G181000 Populus trichocarpa HOM05D010448 ORTHO05D012537 9.4e-167 590.5 388 73.2
Sabra01G0146000 Salix brachista HOM05D010448 ORTHO05D012537 1.3e-155 553.5 388 67.8
Manes.18G108700 Manihot esculenta HOM05D010448 ORTHO05D012537 6.0e-105 385.2 369 51.8
Lalb_Chr18g0053761 Lupinus albus HOM05D010448 ORTHO05D012537 1.3e-86 324.3 380 44.5
Glyma.18G044800 Glycine max HOM05D010448 ORTHO05D012537 1.8e-85 320.5 358 44.7
Lj6g0025570 Lotus japonicus HOM05D010448 ORTHO05D012537 4.0e-85 319.3 370 42.4
Glyma.11G210008 Glycine max HOM05D010448 ORTHO05D012537 5.8e-84 315.5 360 43.6
Medtr3g064460 Medicago truncatula HOM05D010448 ORTHO05D012537 2.9e-83 313.2 355 44.8
Atru.chr6.2743 Acer truncatum HOM05D010448 ORTHO05D012537 4.2e-82 309.3 379 40.4
Phvul.006G086200 Phaseolus vulgaris HOM05D010448 ORTHO05D012537 1.1e-79 301.2 338 44.7
VMungo0540G1047 Vigna mungo HOM05D010448 ORTHO05D012537 2.5e-79 300.1 329 45.0
Psat5g142640 Pisum sativum HOM05D010448 ORTHO05D012537 4.3e-79 299.3 378 43.7
arahy.Tifrunner.gnm1.ann1.4R5R47 Arachis hypogaea HOM05D010448 ORTHO05D012537 2.9e-75 286.6 338 44.4
TPR.G18483 Trifolium pratense HOM05D010448 ORTHO05D012537 2.8e-70 270.0 358 41.9
Ciclev10015844m.g Citrus clementina HOM05D010448 ORTHO05D012537 8.2e-70 268.5 331 41.7
Eucgr.G01906 Eucalyptus grandis HOM05D010448 ORTHO05D012537 3.1e-61 240.0 398 35.4
Atru.chr13.2066 Acer truncatum HOM05D010448 ORTHO05D012537 2.7e-28 130.6 121 47.9
Rhsim07G0240200 Rhododendron simsii HOM05D015450 ORTHO05D017757 1.8e-16 91.3 334 26.0
MBI07_g31506_MAGBIO Magnolia biondii HOM05D010448 ORTHO05D012537 6.4e-14 82.8 328 24.4
Migut.F01253 Erythranthe guttata HOM05D000664 ORTHO05D000491 1.1e-13 82.0 316 24.7
Migut.F01251 Erythranthe guttata HOM05D000664 ORTHO05D000491 9.2e-13 79.0 324 24.4
Manes.14G038100 Manihot esculenta HOM05D000664 ORTHO05D000491 2.0e-12 77.8 332 24.4
HanXRQChr04g0121411 Helianthus annuus HOM05D001729 ORTHO05D001155 1.7e-11 74.7 186 29.6
Actinidia31675 Actinidia chinensis HOM05D000664 ORTHO05D000491 1.1e-10 72.0 267 27.7
Prupe.1G066300 Prunus persica HOM05D000664 ORTHO05D000491 1.5e-10 71.6 307 24.1
Rhsim08G0238800 Rhododendron simsii HOM05D001729 ORTHO05D001155 3.3e-10 70.5 294 25.9
HanXRQChr15g0474381 Helianthus annuus HOM05D008898 ORTHO05D001155 9.5e-10 68.9 294 23.8
PSO675G7142 Papaver somniferum HOM05D008326 ORTHO05D001155 9.5e-10 68.9 197 28.4
Cc02_g04650 Coffea canephora HOM05D000664 ORTHO05D000491 1.2e-09 68.6 331 23.0
Aqoxy5G01770 Aquilegia oxysepala HOM05D000664 ORTHO05D009863 3.6e-09 67.0 259 26.6
HanXRQChr15g0474331 Helianthus annuus HOM05D008898 ORTHO05D001155 3.6e-09 67.0 296 24.0
Lsat_1_v5_gn_5_31100 Lactuca sativa HOM05D001729 ORTHO05D001155 8.1e-09 65.9 203 28.1
SGA_v2.0_scaffold47G17662 Striga asiatica HOM05D002420 ORTHO05D002422 1.1e-08 65.5 238 28.6
COL.COLO4_37361 Corchorus olitorius HOM05D000664 ORTHO05D000491 1.8e-08 64.7 309 24.9
PSO782G2276 Papaver somniferum HOM05D008326 ORTHO05D001155 1.8e-08 64.7 164 28.0
Rhsim08G0237800 Rhododendron simsii HOM05D001729 ORTHO05D001155 2.3e-08 64.3 306 24.8
Hma1.2p1_0432F.1_g152025 Hydrangea macrophylla HOM05D000664 ORTHO05D000491 5.2e-08 63.2 326 23.0
TAR626G1986 Trochodendron aralioides HOM05D000664 ORTHO05D000491 5.2e-08 63.2 185 28.1
A05p28210 Brassica napus HOM05D008227 ORTHO05D010399 2.0e-07 61.2 202 26.7
HanXRQChr06g0171101 Helianthus annuus HOM05D000664 ORTHO05D000491 3.4e-07 60.5 295 24.4
Nitab4.5_0003040g0190 Nicotiana tabacum HOM05D000001 ORTHO05D010224 3.4e-07 60.5 162 28.4
Atru.chr1.895 Acer truncatum HOM05D000664 ORTHO05D000491 4.4e-07 60.1 251 26.7
PSO063G6010 Papaver somniferum HOM05D000664 ORTHO05D000491 7.5e-07 59.3 206 24.3
PSO063G7044 Papaver somniferum HOM05D008326 ORTHO05D001155 7.5e-07 59.3 221 24.0
FAN14G0866 Fragaria x ananassa HOM05D001729 ORTHO05D001155 1.3e-06 58.5 317 23.0
BraA05t21775Z Brassica rapa HOM05D008227 ORTHO05D010399 1.7e-06 58.2 202 26.2
Peaxi162Scf00008g00373 Petunia axillaris HOM05D002420 ORTHO05D002422 2.2e-06 57.8 179 29.1
A05p28900 Brassica napus HOM05D008227 ORTHO05D010399 2.9e-06 57.4 202 26.2
BraA05t21766Z Brassica rapa HOM05D008227 ORTHO05D010399 3.7e-06 57.0 198 26.8
PSO063G7563 Papaver somniferum HOM05D008326 ORTHO05D001155 3.7e-06 57.0 162 26.5
Carub.0007s1819 Capsella rubella HOM05D002743 ORTHO05D002895 6.4e-06 56.2 196 27.6
SGA_v2.0_scaffold69G23275 Striga asiatica HOM05D000664 ORTHO05D000491 8.3e-06 55.8 206 27.7


User provided reference genes

Program Settings