Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra01G0114100 Salix brachista HOM05D006869 ORTHO05D008641 7.4e-84 313.9 169 100.0
Potri.001G145500 Populus trichocarpa HOM05D006869 ORTHO05D008641 2.1e-54 216.1 167 76.0
Manes.15G174500 Manihot esculenta HOM05D006869 ORTHO05D008641 6.8e-37 157.9 178 55.6
COL.COLO4_17099 Corchorus olitorius HOM05D006869 ORTHO05D008641 8.9e-37 157.5 153 60.1
Thecc.03G232900 Theobroma cacao HOM05D006869 ORTHO05D008641 1.5e-36 156.8 167 57.5
CSS0028384 Camellia sinensis var. sinensis HOM05D006869 ORTHO05D008641 9.8e-36 154.1 153 60.8
CSS0030709 Camellia sinensis var. sinensis HOM05D006869 ORTHO05D008641 9.8e-36 154.1 153 60.8
Ciclev10033051m.g Citrus clementina HOM05D006869 ORTHO05D008641 2.8e-35 152.5 157 57.3
Duzib205G1446 Durio zibethinus HOM05D006869 ORTHO05D008641 4.9e-35 151.8 160 58.1
Atru.chr6.1763 Acer truncatum HOM05D006869 ORTHO05D008641 8.3e-35 151.0 155 58.7
RcHm_v2.0_Chr7g0208861 Rosa chinensis HOM05D006869 ORTHO05D008641 3.1e-34 149.1 156 56.4
TWI15G0987 Tripterygium wilfordii HOM05D006869 ORTHO05D008641 3.1e-34 149.1 156 59.0
Prupe.5G042800 Prunus persica HOM05D006869 ORTHO05D008641 4.1e-34 148.7 165 53.9
Gorai.006G215800 Gossypium raimondii HOM05D006869 ORTHO05D008641 3.5e-33 145.6 171 55.0
FAN08G2623 Fragaria x ananassa HOM05D006869 ORTHO05D008641 4.5e-33 145.2 159 54.7
FAN13G1368 Fragaria x ananassa HOM05D006869 ORTHO05D008641 7.8e-33 144.4 151 56.3
MD06G1029000 Malus domestica HOM05D006869 ORTHO05D008641 1.3e-32 143.7 151 57.6
CiPaw.12G061200 Carya illinoinensis HOM05D006869 ORTHO05D008641 1.7e-32 143.3 159 56.6
FAN04G2266 Fragaria x ananassa HOM05D006869 ORTHO05D008641 1.7e-32 143.3 157 55.4
CiPaw.11G089700 Carya illinoinensis HOM05D006869 ORTHO05D008641 2.3e-32 142.9 149 58.4
FAN18G0870 Fragaria x ananassa HOM05D006869 ORTHO05D008641 5.0e-32 141.7 157 54.8
GSVIVG01013242001 Vitis vinifera HOM05D006869 ORTHO05D008641 6.6e-32 141.4 141 58.9
Gohir.D09G192900 Gossypium hirsutum HOM05D006869 ORTHO05D008641 8.6e-32 141.0 154 56.5
Gohir.A09G198300 Gossypium hirsutum HOM05D006869 ORTHO05D008641 1.5e-31 140.2 153 55.6
Sopen06g021250 Solanum pennellii HOM05D006869 ORTHO05D008641 1.9e-31 139.8 162 51.9
FvH4_5g21430 Fragaria vesca HOM05D006869 ORTHO05D008641 7.3e-31 137.9 157 54.1
Nn1g00590 Nelumbo nucifera HOM05D006869 ORTHO05D008641 1.2e-30 137.1 150 58.0
PGSC0003DMG400026597 Solanum tuberosum HOM05D006869 ORTHO05D008641 1.2e-30 137.1 162 51.2
Cpa.g.sc6.427 Carica papaya HOM05D006869 ORTHO05D008641 1.6e-30 136.7 150 57.3
MSTRG.17527 Avicennia marina HOM05D006869 ORTHO05D008641 2.1e-30 136.3 152 53.9
Ca_03396_v3 Cicer arietinum L. HOM05D006869 ORTHO05D008641 2.8e-30 136.0 167 51.5
Medtr2g071640 Medicago truncatula HOM05D006869 ORTHO05D008641 2.8e-30 136.0 161 51.6
Lj3g0015338 Lotus japonicus HOM05D006869 ORTHO05D008641 6.1e-30 134.8 161 53.4
Phvul.005G061500 Phaseolus vulgaris HOM05D006869 ORTHO05D008641 1.0e-29 134.0 167 50.3
TAR375G0341 Trochodendron aralioides HOM05D006869 ORTHO05D008641 3.1e-29 132.5 146 56.8
Actinidia09229 Actinidia chinensis HOM05D002067 ORTHO05D002244 6.8e-29 131.3 165 52.7
DCAR_005606 Daucus carota HOM05D006869 ORTHO05D008641 6.8e-29 131.3 149 54.4
Migut.D00490 Erythranthe guttata HOM05D006869 ORTHO05D008641 6.8e-29 131.3 149 53.0
Eucgr.E00305 Eucalyptus grandis HOM05D006869 ORTHO05D008641 6.8e-29 131.3 142 54.9
ClCG09G012310 Citrullus lanatus HOM05D006869 ORTHO05D008641 1.5e-28 130.2 148 52.0
CsaV3_1G016990 Cucumis sativus L. HOM05D006869 ORTHO05D008641 2.0e-28 129.8 151 51.7
CsaV3_3G049460 Cucumis sativus L. HOM05D006869 ORTHO05D008641 2.0e-28 129.8 151 51.7
TPR.G26622 Trifolium pratense HOM05D006869 ORTHO05D008641 2.0e-28 129.8 164 51.2
Hma1.2p1_0414F.1_g147870 Hydrangea macrophylla HOM05D006869 ORTHO05D008641 2.6e-28 129.4 154 55.8
VMungo1080G1596 Vigna mungo HOM05D006869 ORTHO05D008641 2.6e-28 129.4 158 50.6
MELO3C003378.2 Cucumis melo HOM05D006869 ORTHO05D008641 5.8e-28 128.3 157 49.7
Nitab4.5_0003100g0080 Nicotiana tabacum HOM05D006869 ORTHO05D008641 7.5e-28 127.9 150 54.7
PGR042G2539 Punica granatum HOM05D006869 ORTHO05D008641 7.5e-28 127.9 149 52.3
Sc22g0001440 Simmondsia chinensis HOM05D006869 ORTHO05D008641 9.8e-28 127.5 143 55.2
Aqoxy3G02480 Aquilegia oxysepala HOM05D006869 ORTHO05D008641 2.9e-27 125.9 134 54.5
Glyma.13G259900 Glycine max HOM05D006869 ORTHO05D008641 3.7e-27 125.6 148 52.7
Lalb_Chr25g0285441 Lupinus albus HOM05D006869 ORTHO05D008641 3.7e-27 125.6 140 54.3
arahy.Tifrunner.gnm1.ann1.TLF144 Arachis hypogaea HOM05D006869 ORTHO05D008641 6.4e-27 124.8 167 47.3
Dinv25192 Davidia involucrata HOM05D006869 ORTHO05D008641 8.3e-27 124.4 153 51.6
arahy.Tifrunner.gnm1.ann1.4F5UFQ Arachis hypogaea HOM05D006869 ORTHO05D008641 3.2e-26 122.5 167 46.7
CANSAT21G0218 Cannabis sativa HOM05D006869 ORTHO05D008641 4.1e-26 122.1 159 49.1
PSO675G8621 Papaver somniferum HOM05D006869 ORTHO05D008641 5.4e-26 121.7 153 50.3
arahy.Tifrunner.gnm1.ann1.U4TMK5 Arachis hypogaea HOM05D006869 ORTHO05D008641 1.6e-25 120.2 157 45.9
PSO832G0919 Papaver somniferum HOM05D006869 ORTHO05D008641 1.6e-25 120.2 153 49.7
ECA233G4479 Erigeron canadensis HOM05D006869 ORTHO05D008641 1.0e-24 117.5 164 48.2
PSO732G0001 Papaver somniferum HOM05D006869 ORTHO05D008641 1.0e-24 117.5 154 48.7
Hund14421 Selenicereus undatus HOM05D006869 ORTHO05D008641 1.7e-24 116.7 143 51.7
HanXRQChr08g0227941 Helianthus annuus HOM05D006869 ORTHO05D008641 1.9e-23 113.2 159 47.8
Glyma.15G248100 Glycine max HOM05D006869 ORTHO05D008641 2.5e-23 112.8 147 50.3
THA.LOC104798477 Tarenaya hassleriana HOM05D006869 ORTHO05D008641 2.5e-23 112.8 162 50.0
THA.LOC104798593 Tarenaya hassleriana HOM05D006869 ORTHO05D008641 2.8e-22 109.4 146 50.0
HPP92_026375 Vanilla planifolia HOM05D006869 ORTHO05D008641 3.6e-22 109.0 154 46.1
DCAR_024975 Daucus carota HOM05D006869 ORTHO05D008641 8.0e-22 107.8 149 46.3
MBI04_g13865_MAGBIO Magnolia biondii HOM05D006869 ORTHO05D008641 8.0e-22 107.8 86 68.6
BcaC05g27275 Brassica carinata HOM05D006869 ORTHO05D008641 1.1e-21 107.5 146 49.3
C05p31830 Brassica napus HOM05D006869 ORTHO05D008641 1.1e-21 107.5 146 49.3
BolC5t31911H Brassica oleracea HOM05D006869 ORTHO05D008641 1.1e-21 107.5 146 49.3
unitig_746.g26748 Utricularia gibba HOM05D006869 ORTHO05D008641 1.1e-21 107.5 142 49.3
Sp1g28510 Schrenkiella parvula HOM05D006869 ORTHO05D008641 1.4e-21 107.1 169 46.2
Actinidia14827 Actinidia chinensis HOM05D006869 ORTHO05D008641 1.8e-21 106.7 121 54.5
AT1G32370 Arabidopsis thaliana HOM05D006869 ORTHO05D008641 2.3e-21 106.3 150 48.0
BcaB07g32921 Brassica carinata HOM05D006869 ORTHO05D008641 3.1e-21 105.9 146 48.6
A09p33790 Brassica napus HOM05D006869 ORTHO05D008641 4.0e-21 105.5 146 48.6
BraA09t38929Z Brassica rapa HOM05D006869 ORTHO05D008641 4.0e-21 105.5 146 48.6
CARHR031750 Cardamine hirsuta HOM05D006869 ORTHO05D008641 4.0e-21 105.5 154 48.7
vmacro14155 Vaccinium macrocarpon HOM05D006869 ORTHO05D008641 5.2e-21 105.1 71 76.1
AL1G46570 Arabidopsis lyrata HOM05D006869 ORTHO05D008641 6.8e-21 104.8 136 50.7
Thhalv10009100m.g Eutrema salsugineum HOM05D006869 ORTHO05D008641 8.9e-21 104.4 159 45.9
Rhsim07G0123600 Rhododendron simsii HOM05D006869 ORTHO05D008641 2.0e-20 103.2 71 74.6
Carub.0001s3075 Capsella rubella HOM05D006869 ORTHO05D008641 3.4e-20 102.4 159 44.7
Aa31LG2G13630 Aethionema arabicum HOM05D006869 ORTHO05D008641 7.5e-20 101.3 164 44.5
Cc08_g02310 Coffea canephora HOM05D006869 ORTHO05D008641 7.5e-20 101.3 87 62.1
Oeu015441.1 Olea europaea HOM05D006869 ORTHO05D008641 1.7e-19 100.1 87 64.4
Os02g0279600 Oryza sativa ssp. japonica HOM05D006869 ORTHO05D008641 1.1e-18 97.4 129 48.1
SGA_v2.0_scaffold94G28479 Striga asiatica HOM05D006869 ORTHO05D008641 1.1e-18 97.4 115 52.2
Peaxi162Scf00497g00098 Petunia axillaris HOM05D006869 ORTHO05D008641 7.0e-18 94.7 70 67.1
THA.LOC104822843 Tarenaya hassleriana HOM05D006869 ORTHO05D008641 9.2e-18 94.4 130 49.2
Nitab4.5_0004658g0060 Nicotiana tabacum HOM05D006869 ORTHO05D008641 1.2e-17 94.0 73 64.4
Zm00001eb024260 Zea mays HOM05D006869 ORTHO05D008641 1.2e-17 94.0 144 45.1
EL10Ac5g12174 Beta vulgaris HOM05D006869 ORTHO05D008641 4.6e-17 92.0 83 59.0
ATR0049G078 Amborella trichopoda HOM05D006869 ORTHO05D008641 7.8e-17 91.3 117 51.3
Lsat_1_v5_gn_6_67180 Lactuca sativa HOM05D006869 ORTHO05D008641 7.8e-17 91.3 66 71.2
SEGI_28722 Sequoiadendron giganteum HOM05D006869 ORTHO05D008641 3.0e-16 89.4 127 48.0
SalBow6G5905 Salvia bowleyana HOM05D006869 ORTHO05D008641 1.1e-15 87.4 78 56.4
Ah.07g200090 Amaranthus hybridus HOM05D006869 ORTHO05D008641 1.9e-15 86.7 65 66.2
Psat1g009440 Pisum sativum HOM05D006869 ORTHO05D008641 3.1e-13 79.3 104 51.0
Sed0006536 Sechium edule HOM05D006869 ORTHO05D008641 2.0e-12 76.6 112 42.0
Dinv28924 Davidia involucrata HOM05D002067 ORTHO05D002244 6.4e-11 71.6 65 60.0
Sabra03G0058400 Salix brachista HOM05D002067 ORTHO05D002244 5.4e-10 68.6 56 69.6
BolC5t32616H Brassica oleracea HOM05D006869 ORTHO05D008641 9.2e-10 67.8 111 45.0
BcaC05g27873 Brassica carinata HOM05D006869 ORTHO05D008641 1.2e-09 67.4 145 41.4
C05p38760 Brassica napus HOM05D006869 ORTHO05D008641 1.2e-09 67.4 145 41.4
Haze_08288 Corylus avellana HOM05D006869 ORTHO05D008641 2.1e-09 66.6 76 50.0
vmacro23515 Vaccinium macrocarpon HOM05D006869 ORTHO05D008641 6.0e-09 65.1 41 75.6
PGR142G3578 Punica granatum HOM05D006869 ORTHO05D008641 1.9e-07 60.1 59 50.8


User provided reference genes

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