Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra01G0112400 Salix brachista HOM05D007134 ORTHO05D009004 8.7e-212 740.0 354 100.0
Potri.001G144000 Populus trichocarpa HOM05D007134 ORTHO05D009004 4.4e-179 631.3 354 85.3
Manes.15G172000 Manihot esculenta HOM05D007134 ORTHO05D009004 6.8e-140 501.1 353 67.7
Atru.chr6.1744 Acer truncatum HOM05D007134 ORTHO05D009004 4.1e-137 491.9 351 65.8
COL.COLO4_17065 Corchorus olitorius HOM05D007134 ORTHO05D009004 4.3e-134 481.9 332 66.6
Thecc.03G230400 Theobroma cacao HOM05D007134 ORTHO05D009004 9.0e-132 474.2 332 66.0
CiPaw.11G091800 Carya illinoinensis HOM05D007134 ORTHO05D009004 9.9e-131 470.7 351 63.2
Cfa012416 Carpinus fangiana HOM05D007134 ORTHO05D009004 4.9e-130 468.4 351 63.2
Duzib205G1618 Durio zibethinus HOM05D007134 ORTHO05D009004 4.2e-129 465.3 331 65.3
Gohir.D12G211900 Gossypium hirsutum HOM05D007134 ORTHO05D009004 4.2e-129 465.3 331 65.3
Gorai.008G227500 Gossypium raimondii HOM05D007134 ORTHO05D009004 4.2e-129 465.3 331 65.3
GSVIVG01013189001 Vitis vinifera HOM05D007134 ORTHO05D009004 6.0e-128 461.5 321 67.3
TWI81G0484 Tripterygium wilfordii HOM05D007134 ORTHO05D009004 1.3e-127 460.3 332 65.1
Haze_08260 Corylus avellana HOM05D007134 ORTHO05D009004 2.3e-127 459.5 365 61.6
CSS0021568 Camellia sinensis var. sinensis HOM05D007134 ORTHO05D009004 8.7e-127 457.6 327 65.7
TAR629G3531 Trochodendron aralioides HOM05D007134 ORTHO05D009004 8.7e-127 457.6 348 61.2
Dinv28939 Davidia involucrata HOM05D007134 ORTHO05D009004 1.9e-126 456.4 350 62.6
Actinidia03384 Actinidia chinensis HOM05D007134 ORTHO05D009004 3.3e-126 455.7 348 62.1
Prupe.5G039700 Prunus persica HOM05D007134 ORTHO05D009004 1.5e-123 446.8 352 62.2
Psat4g079040 Pisum sativum HOM05D007134 ORTHO05D009004 1.3e-122 443.7 351 60.4
Hma1.2p1_2785F.1_g328490 Hydrangea macrophylla HOM05D007134 ORTHO05D009004 1.7e-122 443.4 352 60.5
Hma1.2p1_0991F.1_g244990 Hydrangea macrophylla HOM05D007134 ORTHO05D009004 2.9e-122 442.6 335 61.8
Phvul.003G230000 Phaseolus vulgaris HOM05D007134 ORTHO05D009004 5.4e-121 438.3 327 65.4
TPR.G28658 Trifolium pratense HOM05D007134 ORTHO05D009004 9.3e-121 437.6 351 59.5
ClCG10G001760 Citrullus lanatus HOM05D007134 ORTHO05D009004 4.6e-120 435.3 345 59.7
Glyma.05G112400 Glycine max HOM05D007134 ORTHO05D009004 6.0e-120 434.9 351 60.1
Lj8A293T18 Lonicera japonica HOM05D007134 ORTHO05D009004 6.0e-120 434.9 331 62.8
PGSC0003DMG400017530 Solanum tuberosum HOM05D007134 ORTHO05D009004 7.9e-120 434.5 325 63.4
CANSAT21G0276 Cannabis sativa HOM05D007134 ORTHO05D009004 1.0e-119 434.1 349 59.6
Ca_22068_v3 Cicer arietinum L. HOM05D007134 ORTHO05D009004 1.0e-119 434.1 354 57.6
Lalb_Chr05g0220571 Lupinus albus HOM05D007134 ORTHO05D009004 5.1e-119 431.8 352 59.9
MELO3C013860.2 Cucumis melo HOM05D007134 ORTHO05D009004 1.1e-118 430.6 347 58.8
Ciclev10032247m.g Citrus clementina HOM05D007134 ORTHO05D009004 1.9e-118 429.9 331 62.5
Peaxi162Scf00006g04220 Petunia axillaris HOM05D007134 ORTHO05D009004 3.3e-118 429.1 331 61.0
Lj4g0007831 Lotus japonicus HOM05D007134 ORTHO05D009004 5.6e-118 428.3 326 62.9
PSO782G3567 Papaver somniferum HOM05D007134 ORTHO05D009004 5.6e-118 428.3 325 60.6
MD06G1032400 Malus domestica HOM05D007134 ORTHO05D009004 8.1e-117 424.5 345 60.3
Glyma.17G154600 Glycine max HOM05D007134 ORTHO05D009004 1.1e-116 424.1 327 63.0
PGR042G2424 Punica granatum HOM05D007134 ORTHO05D009004 2.4e-116 422.9 332 61.7
arahy.Tifrunner.gnm1.ann1.2XNM6Q Arachis hypogaea HOM05D007134 ORTHO05D009004 4.0e-116 422.2 326 61.7
CsaV3_3G001860 Cucumis sativus L. HOM05D007134 ORTHO05D009004 4.0e-116 422.2 332 60.2
Solyc08g077090.3 Solanum lycopersicum HOM05D007134 ORTHO05D009004 6.9e-116 421.4 330 60.0
Nitab4.5_0002931g0030 Nicotiana tabacum HOM05D007134 ORTHO05D009004 9.0e-116 421.0 332 60.5
arahy.Tifrunner.gnm1.ann1.40JZG2 Arachis hypogaea HOM05D007134 ORTHO05D009004 2.6e-115 419.5 326 61.3
CAN.G1659.3 Capsicum annuum HOM05D007134 ORTHO05D009004 2.2e-114 416.4 334 59.3
FAN18G1678 Fragaria x ananassa HOM05D007134 ORTHO05D009004 6.4e-114 414.8 331 61.0
Sc01g0007540 Simmondsia chinensis HOM05D007134 ORTHO05D009004 6.4e-114 414.8 328 59.1
Sopen08g025670 Solanum pennellii HOM05D007134 ORTHO05D009004 1.1e-113 414.1 329 59.6
RcHm_v2.0_Chr7g0209231 Rosa chinensis HOM05D007134 ORTHO05D009004 1.9e-113 413.3 342 58.2
Sed0020644 Sechium edule HOM05D007134 ORTHO05D009004 1.9e-113 413.3 338 59.8
THA.LOC104814437 Tarenaya hassleriana HOM05D007134 ORTHO05D009004 2.4e-113 412.9 346 57.2
AUR62007266 Chenopodium quinoa HOM05D007134 ORTHO05D009004 3.2e-113 412.5 328 58.8
Gohir.A12G209200 Gossypium hirsutum HOM05D007134 ORTHO05D009004 3.2e-113 412.5 294 67.0
Eucgr.E00292 Eucalyptus grandis HOM05D007134 ORTHO05D009004 4.2e-113 412.1 355 56.3
EL10Ac5g12144 Beta vulgaris HOM05D007134 ORTHO05D009004 5.5e-113 411.8 353 56.1
Nitab4.5_0001276g0070 Nicotiana tabacum HOM05D007134 ORTHO05D009004 1.2e-112 410.6 321 61.1
Aqoxy3G02427 Aquilegia oxysepala HOM05D007134 ORTHO05D009004 3.5e-112 409.1 325 59.4
AL4G31350 Arabidopsis lyrata HOM05D007134 ORTHO05D009004 4.6e-112 408.7 326 60.4
Oeu036071.3 Olea europaea HOM05D007134 ORTHO05D009004 1.3e-111 407.1 336 60.4
FAN08G2031 Fragaria x ananassa HOM05D007134 ORTHO05D009004 2.3e-111 406.4 331 59.5
AL457U10010 Arabidopsis lyrata HOM05D007134 ORTHO05D009004 3.9e-111 405.6 326 60.1
FvH4_5g21740 Fragaria vesca HOM05D007134 ORTHO05D009004 8.7e-111 404.4 331 59.5
Sp4g17520 Schrenkiella parvula HOM05D007134 ORTHO05D009004 8.7e-111 404.4 326 58.9
CDE12G0960 Ceratophyllum demersum HOM05D007134 ORTHO05D009004 1.9e-110 403.3 347 57.3
Cc08_g02480 Coffea canephora HOM05D007134 ORTHO05D009004 5.6e-110 401.7 320 60.9
Aa31LG9G15330 Aethionema arabicum HOM05D007134 ORTHO05D009004 1.6e-109 400.2 345 56.2
CDE04G0512 Ceratophyllum demersum HOM05D007134 ORTHO05D009004 2.8e-109 399.4 352 57.4
Thhalv10016981m.g Eutrema salsugineum HOM05D007134 ORTHO05D009004 2.8e-109 399.4 344 57.3
FAN13G3184 Fragaria x ananassa HOM05D007134 ORTHO05D009004 3.7e-109 399.1 331 58.3
vmacro00339 Vaccinium macrocarpon HOM05D007134 ORTHO05D009004 6.2e-109 398.3 454 48.2
A03p19520 Brassica napus HOM05D007134 ORTHO05D009004 1.1e-108 397.5 344 55.8
BraA03t11205Z Brassica rapa HOM05D007134 ORTHO05D009004 1.1e-108 397.5 344 55.8
AT2G35320 Arabidopsis thaliana HOM05D007134 ORTHO05D009004 2.4e-108 396.4 331 57.4
Carub.0004s1701 Capsella rubella HOM05D007134 ORTHO05D009004 3.1e-108 396.0 328 57.0
CARHR129460 Cardamine hirsuta HOM05D007134 ORTHO05D009004 4.0e-108 395.6 344 54.7
Rhsim11G0013400 Rhododendron simsii HOM05D007134 ORTHO05D009004 9.0e-108 394.4 464 46.6
Ah.12g054890 Amaranthus hybridus HOM05D007134 ORTHO05D009004 1.5e-107 393.7 329 57.1
SalBow7G3039 Salvia bowleyana HOM05D007134 ORTHO05D009004 3.8e-106 389.0 333 57.1
C03p22750 Brassica napus HOM05D007134 ORTHO05D009004 4.9e-106 388.7 344 54.1
MSTRG.6669 Avicennia marina HOM05D007134 ORTHO05D009004 1.1e-105 387.5 329 55.9
BolC3t14673H Brassica oleracea HOM05D007134 ORTHO05D009004 3.2e-105 386.0 344 54.1
SGA_v2.0_scaffold34G13941 Striga asiatica HOM05D007134 ORTHO05D009004 7.1e-105 384.8 328 55.8
SalBow7G1996 Salvia bowleyana HOM05D007134 ORTHO05D009004 9.3e-105 384.4 328 57.0
ECA233G0754 Erigeron canadensis HOM05D007134 ORTHO05D009004 2.7e-104 382.9 327 56.6
Migut.M00165 Erythranthe guttata HOM05D007134 ORTHO05D009004 1.3e-103 380.6 321 57.0
Lsat_1_v5_gn_6_64760 Lactuca sativa HOM05D007134 ORTHO05D009004 1.5e-102 377.1 329 55.6
Hund11255 Selenicereus undatus HOM05D007134 ORTHO05D009004 3.3e-102 375.9 362 51.7
ATR0049G037 Amborella trichopoda HOM05D007134 ORTHO05D009004 5.7e-102 375.2 342 53.5
DCAR_032214 Daucus carota HOM05D007134 ORTHO05D009004 4.1e-100 369.0 334 53.9
Nn6g33621 Nelumbo nucifera HOM05D007134 ORTHO05D009004 1.0e-98 364.4 332 52.4
HanXRQChr06g0178411 Helianthus annuus HOM05D007134 ORTHO05D009004 2.9e-98 362.8 328 54.9
Os06g0110100 Oryza sativa ssp. japonica HOM05D007134 ORTHO05D009004 1.6e-96 357.1 329 52.9
unitig_749.g14086 Utricularia gibba HOM05D007134 ORTHO05D009004 3.0e-95 352.8 329 53.8
Zm00001eb417090 Zea mays HOM05D007134 ORTHO05D009004 6.3e-93 345.1 339 51.0
BcaC01g05731 Brassica carinata HOM05D007134 ORTHO05D009004 2.5e-89 333.2 344 48.8
AUR62018733 Chenopodium quinoa HOM05D007134 ORTHO05D009004 2.1e-88 330.1 328 49.4
FAN04G0135 Fragaria x ananassa HOM05D007134 ORTHO05D009004 1.4e-87 327.4 331 50.5
PSO063G6706 Papaver somniferum HOM05D007134 ORTHO05D009004 1.4e-87 327.4 325 48.6
Medtr4g098510 Medicago truncatula HOM05D007134 ORTHO05D009004 2.7e-80 303.1 274 55.8
Pp3c2_15970 Physcomitrium patens HOM05D007134 ORTHO05D009004 2.2e-74 283.5 316 44.0
AagrBONN_evm.TU.Sc2ySwM_117.2263 Anthoceros agrestis HOM05D007134 ORTHO05D009004 2.3e-71 273.5 330 41.2
VMungo0251G0669 Vigna mungo HOM05D007134 ORTHO05D009004 8.5e-66 255.0 212 59.0
QL12p006104 Quercus lobata HOM05D007134 ORTHO05D009004 9.8e-62 241.5 153 70.6
Pp3c1_31250 Physcomitrium patens HOM05D007134 ORTHO05D009004 8.3e-61 238.4 350 35.1
Pp3c2_10940 Physcomitrium patens HOM05D007134 ORTHO05D009004 4.9e-53 212.6 325 38.2
Pp3c17_17110 Physcomitrium patens HOM05D007134 ORTHO05D009004 1.2e-46 191.4 287 35.9
VMungo0251G0585 Vigna mungo HOM05D007134 ORTHO05D009004 2.6e-46 190.3 113 77.9
SEGI_12545 Sequoiadendron giganteum HOM05D007134 ORTHO05D009004 4.3e-41 172.9 113 68.1
Cpa.g.sc71.65 Carica papaya HOM05D007134 ORTHO05D009004 9.2e-36 155.2 90 67.8
Nn6g33134 Nelumbo nucifera HOM05D007134 ORTHO05D009004 2.4e-12 77.4 70 52.9
Cre09.g398150 Chlamydomonas reinhardtii HOM05D007134 ORTHO05D009004 9.9e-06 55.5 103 30.1


User provided reference genes

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