Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra01G0111500 Salix brachista HOM05D006772 ORTHO05D008367 3.6e-67 258.1 127 100.0
Potri.001G142700 Populus trichocarpa HOM05D006772 ORTHO05D008367 1.0e-61 240.0 127 90.6
Potri.003G091400 Populus trichocarpa HOM05D006772 ORTHO05D008367 1.7e-56 222.6 127 87.4
Sabra03G0061100 Salix brachista HOM05D006772 ORTHO05D008367 2.9e-56 221.9 127 85.8
RcHm_v2.0_Chr7g0209491 Rosa chinensis HOM05D006772 ORTHO05D008367 2.1e-43 179.1 130 69.2
FvH4_5g21990 Fragaria vesca HOM05D006772 ORTHO05D008367 8.1e-43 177.2 126 69.8
FAN18G1611 Fragaria x ananassa HOM05D006772 ORTHO05D008367 8.1e-43 177.2 126 69.8
QL12p005804 Quercus lobata HOM05D006772 ORTHO05D008367 8.1e-43 177.2 125 68.8
QL12p005837 Quercus lobata HOM05D006772 ORTHO05D008367 2.4e-42 175.6 125 68.0
FAN04G3098 Fragaria x ananassa HOM05D006772 ORTHO05D008367 3.1e-42 175.3 126 69.0
Thecc.03G229400 Theobroma cacao HOM05D006772 ORTHO05D008367 3.1e-42 175.3 125 68.8
Duzib205G2036 Durio zibethinus HOM05D006772 ORTHO05D008367 2.0e-41 172.6 125 70.4
FAN08G3182 Fragaria x ananassa HOM05D006772 ORTHO05D008367 2.0e-41 172.6 126 68.3
Prupe.5G037100 Prunus persica HOM05D006772 ORTHO05D008367 2.0e-41 172.6 126 67.5
COL.COLO4_17058 Corchorus olitorius HOM05D006772 ORTHO05D008367 2.6e-41 172.2 125 68.8
MD06G1033600 Malus domestica HOM05D006772 ORTHO05D008367 4.5e-41 171.4 126 65.1
Manes.17G012000 Manihot esculenta HOM05D006772 ORTHO05D008367 6.4e-40 167.5 130 70.0
Haze_08246 Corylus avellana HOM05D006772 ORTHO05D008367 1.4e-39 166.4 128 65.6
Peaxi162Scf00460g00052 Petunia axillaris HOM05D006772 ORTHO05D008367 1.9e-39 166.0 125 66.4
Cc08_g02570 Coffea canephora HOM05D006772 ORTHO05D008367 2.4e-39 165.6 125 64.0
FAN13G1934 Fragaria x ananassa HOM05D006772 ORTHO05D008367 5.4e-39 164.5 119 69.7
Hma1.2p1_0991F.1_g245070 Hydrangea macrophylla HOM05D006772 ORTHO05D008367 5.4e-39 164.5 125 68.8
Cfa012424 Carpinus fangiana HOM05D006772 ORTHO05D008367 2.1e-38 162.5 128 64.8
Rhsim07G0126400 Rhododendron simsii HOM05D006772 ORTHO05D008367 2.7e-38 162.2 125 62.4
TAR375G0733 Trochodendron aralioides HOM05D006772 ORTHO05D008367 6.0e-38 161.0 126 68.3
Gorai.003G181100 Gossypium raimondii HOM05D006772 ORTHO05D008367 7.9e-38 160.6 125 64.0
Eucgr.D02187 Eucalyptus grandis HOM05D006772 ORTHO05D008367 1.3e-37 159.8 125 67.2
Gohir.D03G170700 Gossypium hirsutum HOM05D006772 ORTHO05D008367 1.3e-37 159.8 125 64.0
PGSC0003DMG400043394 Solanum tuberosum HOM05D006772 ORTHO05D008367 1.3e-37 159.8 125 64.8
Nitab4.5_0001666g0010 Nicotiana tabacum HOM05D006772 ORTHO05D008367 1.8e-37 159.5 127 64.6
MD16G1275100 Malus domestica HOM05D006772 ORTHO05D008367 2.3e-37 159.1 127 62.2
CiPaw.12G062700 Carya illinoinensis HOM05D006772 ORTHO05D008367 8.7e-37 157.1 131 62.6
CSS0038918 Camellia sinensis var. sinensis HOM05D006772 ORTHO05D008367 1.1e-36 156.8 125 63.2
Sopen08g025600 Solanum pennellii HOM05D006772 ORTHO05D008367 1.1e-36 156.8 125 64.8
Eucgr.E00285 Eucalyptus grandis HOM05D006772 ORTHO05D008367 1.9e-36 156.0 127 61.4
Nn1g00537 Nelumbo nucifera HOM05D006772 ORTHO05D008367 1.9e-36 156.0 127 66.9
CSS0016213 Camellia sinensis var. sinensis HOM05D006772 ORTHO05D008367 3.3e-36 155.2 125 62.4
Gohir.A03G001600 Gossypium hirsutum HOM05D006772 ORTHO05D008367 3.3e-36 155.2 125 64.8
Solyc08g077020.1 Solanum lycopersicum HOM05D006772 ORTHO05D008367 3.3e-36 155.2 125 64.0
arahy.Tifrunner.gnm1.ann1.6N9PAN Arachis hypogaea HOM05D006772 ORTHO05D008367 7.4e-36 154.1 128 61.7
arahy.Tifrunner.gnm1.ann1.WNGN5W Arachis hypogaea HOM05D006772 ORTHO05D008367 7.4e-36 154.1 128 61.7
Nitab4.5_0000804g0080 Nicotiana tabacum HOM05D006772 ORTHO05D008367 7.4e-36 154.1 126 61.1
Nn6g33607 Nelumbo nucifera HOM05D006772 ORTHO05D008367 6.2e-35 151.0 127 64.6
Ciclev10033079m.g Citrus clementina HOM05D006772 ORTHO05D008367 1.4e-34 149.8 127 61.4
Aqoxy3G02398 Aquilegia oxysepala HOM05D006772 ORTHO05D008367 1.8e-34 149.4 126 63.5
Medtr5g014370 Medicago truncatula HOM05D006772 ORTHO05D008367 5.3e-34 147.9 134 59.0
HanXRQChr03g0084031 Helianthus annuus HOM05D006772 ORTHO05D008367 9.0e-34 147.1 130 59.2
Lsat_1_v5_gn_6_78680 Lactuca sativa HOM05D006772 ORTHO05D008367 9.0e-34 147.1 134 57.5
Lalb_Chr05g0213971 Lupinus albus HOM05D006772 ORTHO05D008367 1.5e-33 146.4 132 56.8
CANSAT21G2446 Cannabis sativa HOM05D006772 ORTHO05D008367 2.6e-33 145.6 136 58.8
Lj2g0019736 Lotus japonicus HOM05D006772 ORTHO05D008367 3.4e-33 145.2 136 56.6
Psat2g173920 Pisum sativum HOM05D006772 ORTHO05D008367 4.5e-33 144.8 130 58.5
Glyma.11G043000 Glycine max HOM05D006772 ORTHO05D008367 1.3e-32 143.3 126 55.6
Sc01g0007510 Simmondsia chinensis HOM05D006772 ORTHO05D008367 1.7e-32 142.9 133 59.4
Ca_24649_v3 Cicer arietinum L. HOM05D006772 ORTHO05D008367 2.2e-32 142.5 125 59.2
Glyma.17G155300 Glycine max HOM05D006772 ORTHO05D008367 2.9e-32 142.1 133 56.4
Gohir.D12G211500 Gossypium hirsutum HOM05D006772 ORTHO05D008367 6.4e-32 141.0 125 60.0
Gohir.A12G208800 Gossypium hirsutum HOM05D006772 ORTHO05D008367 8.4e-32 140.6 125 60.0
Gorai.008G227000 Gossypium raimondii HOM05D006772 ORTHO05D008367 8.4e-32 140.6 125 60.0
TWI15G0236 Tripterygium wilfordii HOM05D006772 ORTHO05D008367 1.1e-31 140.2 126 59.5
Lalb_Chr16g0379141 Lupinus albus HOM05D006772 ORTHO05D008367 1.4e-31 139.8 131 52.7
Gohir.A11G030300 Gossypium hirsutum HOM05D006772 ORTHO05D008367 5.5e-31 137.9 127 56.7
PGR042G0478 Punica granatum HOM05D006772 ORTHO05D008367 7.1e-31 137.5 128 58.6
Glyma.05G111700 Glycine max HOM05D006772 ORTHO05D008367 9.3e-31 137.1 128 57.8
TWI60G0285 Tripterygium wilfordii HOM05D006772 ORTHO05D008367 9.3e-31 137.1 127 60.6
Atru.chr6.1734 Acer truncatum HOM05D006772 ORTHO05D008367 2.1e-30 136.0 126 63.5
VMungo1215G2403 Vigna mungo HOM05D006772 ORTHO05D008367 1.0e-29 133.7 131 54.2
ECA240G4560 Erigeron canadensis HOM05D000236 ORTHO05D000192 1.8e-29 132.9 124 58.9
TPR.G7824 Trifolium pratense HOM05D006772 ORTHO05D008367 2.3e-29 132.5 127 56.7
MELO3C003403.2 Cucumis melo HOM05D006772 ORTHO05D008367 3.9e-29 131.7 134 53.7
DCAR_024967 Daucus carota HOM05D006772 ORTHO05D008367 3.9e-29 131.7 129 59.7
Phvul.002G006800 Phaseolus vulgaris HOM05D006772 ORTHO05D008367 3.3e-28 128.6 128 53.9
Lj4g0015139 Lotus japonicus HOM05D006772 ORTHO05D008367 1.6e-27 126.3 136 52.2
VMungo0251G2965 Vigna mungo HOM05D006772 ORTHO05D008367 1.6e-27 126.3 129 52.7
Sed0027084 Sechium edule HOM05D006772 ORTHO05D008367 8.2e-27 124.0 133 54.1
MBI02_g14426_MAGBIO Magnolia biondii HOM05D006772 ORTHO05D008367 2.4e-26 122.5 126 53.2
PGSC0003DMG400036785 Solanum tuberosum HOM05D006772 ORTHO05D008367 2.4e-26 122.5 105 60.0
Ah.12g054950 Amaranthus hybridus HOM05D006772 ORTHO05D008367 3.1e-26 122.1 118 53.4
Sed0022952 Sechium edule HOM05D006772 ORTHO05D008367 3.1e-26 122.1 131 54.2
CsaV3_3G049240 Cucumis sativus L. HOM05D006772 ORTHO05D008367 4.0e-26 121.7 137 51.1
Lj4g0019114 Lotus japonicus HOM05D006772 ORTHO05D008367 2.0e-25 119.4 137 50.4
THA.LOC104807956 Tarenaya hassleriana HOM05D006772 ORTHO05D008367 2.0e-25 119.4 126 54.8
Gohir.D11G028900 Gossypium hirsutum HOM05D006772 ORTHO05D008367 2.6e-25 119.0 100 59.0
CiPaw.11G092300 Carya illinoinensis HOM05D006772 ORTHO05D008367 5.8e-25 117.9 125 52.8
CDE02G2078 Ceratophyllum demersum HOM05D004438 ORTHO05D005256 3.8e-24 115.2 119 52.9
A05p10490 Brassica napus HOM05D006772 ORTHO05D008367 1.4e-23 113.2 130 50.8
BraA05t19987Z Brassica rapa HOM05D006772 ORTHO05D008367 1.4e-23 113.2 130 50.8
MBI05_g46462_MAGBIO Magnolia biondii HOM05D006772 ORTHO05D008367 1.4e-23 113.2 126 50.0
CARHR129440 Cardamine hirsuta HOM05D006772 ORTHO05D008367 2.5e-23 112.5 131 50.4
BcaB02g09453 Brassica carinata HOM05D006772 ORTHO05D008367 3.2e-23 112.1 130 50.0
BcaB02g09458 Brassica carinata HOM05D006772 ORTHO05D008367 3.2e-23 112.1 130 50.0
BcaB02g09462 Brassica carinata HOM05D006772 ORTHO05D008367 3.2e-23 112.1 130 50.0
BcaC02g11632 Brassica carinata HOM05D006772 ORTHO05D008367 3.2e-23 112.1 130 50.0
C04p12890 Brassica napus HOM05D006772 ORTHO05D008367 3.2e-23 112.1 130 50.0
C04p64260 Brassica napus HOM05D006772 ORTHO05D008367 3.2e-23 112.1 129 48.8
BolC4t22934H Brassica oleracea HOM05D006772 ORTHO05D008367 3.2e-23 112.1 130 50.0
CDE08G0662 Ceratophyllum demersum HOM05D006772 ORTHO05D008367 4.2e-23 111.7 119 51.3
A04p26870 Brassica napus HOM05D006772 ORTHO05D008367 5.5e-23 111.3 129 48.8
BraA04t18187Z Brassica rapa HOM05D006772 ORTHO05D008367 5.5e-23 111.3 129 48.8
BcaB02g09448 Brassica carinata HOM05D006772 ORTHO05D008367 7.1e-23 110.9 130 46.9
Thhalv10017432m.g Eutrema salsugineum HOM05D006772 ORTHO05D008367 7.1e-23 110.9 130 50.0
BcaB06g28837 Brassica carinata HOM05D006772 ORTHO05D008367 2.7e-22 109.0 130 47.7
PGR031G2239 Punica granatum HOM05D006772 ORTHO05D008367 2.7e-22 109.0 138 47.1
BcaC02g07718 Brassica carinata HOM05D006772 ORTHO05D008367 4.6e-22 108.2 129 48.1
BolC4t27910H Brassica oleracea HOM05D006772 ORTHO05D008367 4.6e-22 108.2 129 48.1
Sp4g17500 Schrenkiella parvula HOM05D006772 ORTHO05D008367 4.6e-22 108.2 130 47.7
AT2G35290 Arabidopsis thaliana HOM05D006772 ORTHO05D008367 1.8e-21 106.3 131 48.9
Gorai.007G031500 Gossypium raimondii HOM05D006772 ORTHO05D008367 3.9e-21 105.1 92 56.5
Dinv28946 Davidia involucrata HOM05D006772 ORTHO05D008367 5.1e-21 104.8 71 69.0
Aa31LG9G15310 Aethionema arabicum HOM05D006772 ORTHO05D008367 1.5e-20 103.2 129 49.6
Carub.0004s1698 Capsella rubella HOM05D006772 ORTHO05D008367 7.4e-20 100.9 126 49.2
Peaxi162Scf00102g00514 Petunia axillaris HOM05D006772 ORTHO05D008367 9.7e-20 100.5 128 46.1
AL4G31320 Arabidopsis lyrata HOM05D006772 ORTHO05D008367 2.2e-19 99.4 111 52.3
HPP92_011259 Vanilla planifolia HOM05D006772 ORTHO05D008367 8.2e-19 97.4 127 47.2
Os03g0170100 Oryza sativa ssp. japonica HOM05D006772 ORTHO05D008367 5.3e-18 94.7 115 51.3
ATR0564G457 Amborella trichopoda HOM05D006772 ORTHO05D008367 3.8e-16 88.6 135 41.5
SEGI_37864 Sequoiadendron giganteum HOM05D006772 ORTHO05D008367 3.2e-15 85.5 101 46.5
Zm00001eb402290 Zea mays HOM05D006772 ORTHO05D008367 4.2e-15 85.1 115 47.0
EL10Ac5g12135 Beta vulgaris HOM05D003523 ORTHO05D008367 4.3e-12 75.1 101 47.5
MBI02_g18931_MAGBIO Magnolia biondii HOM05D006772 ORTHO05D008367 3.1e-10 68.9 126 37.3
SEGI_18606 Sequoiadendron giganteum HOM05D006772 ORTHO05D008367 1.0e-08 63.9 91 42.9
Pp3c1_8870 Physcomitrium patens HOM05D006772 ORTHO05D008367 1.9e-07 59.7 121 33.1
Mapoly0034s0008 Marchantia polymorpha HOM05D000204 ORTHO05D010448 4.7e-06 55.1 109 29.4


User provided reference genes

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