Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra01G0109300 Salix brachista HOM05D006310 ORTHO05D007768 5.9e-103 377.9 187 100.0
Potri.001G140500 Populus trichocarpa HOM05D006310 ORTHO05D007768 5.0e-86 321.6 186 87.6
Manes.15G192960 Manihot esculenta HOM05D006310 ORTHO05D007768 3.4e-42 176.0 194 53.6
Atru.chr6.1649 Acer truncatum HOM05D006310 ORTHO05D007768 1.1e-37 161.0 207 48.3
Dinv28973 Davidia involucrata HOM05D006310 ORTHO05D007768 5.3e-35 152.1 215 46.0
Haze_08202 Corylus avellana HOM05D006310 ORTHO05D007768 9.0e-35 151.4 200 52.0
Cfa012467 Carpinus fangiana HOM05D006310 ORTHO05D007768 2.2e-33 146.7 200 51.5
Cpa.g.sc90.63 Carica papaya HOM05D006310 ORTHO05D007768 4.2e-32 142.5 197 42.1
Dinv25232 Davidia involucrata HOM05D006310 ORTHO05D007768 7.1e-32 141.7 210 46.7
QL12p004739 Quercus lobata HOM05D006310 ORTHO05D007768 2.7e-31 139.8 194 46.9
TWI15G1132 Tripterygium wilfordii HOM05D006310 ORTHO05D007768 3.5e-31 139.4 199 46.7
CiPaw.12G065800 Carya illinoinensis HOM05D006310 ORTHO05D007768 6.0e-31 138.7 206 48.1
Gohir.A08G155500 Gossypium hirsutum HOM05D006310 ORTHO05D007768 8.2e-28 128.3 196 45.4
CSS0006923 Camellia sinensis var. sinensis HOM05D006310 ORTHO05D007768 1.8e-27 127.1 204 44.6
Gohir.D08G176100 Gossypium hirsutum HOM05D006310 ORTHO05D007768 1.2e-26 124.4 196 44.4
CSS0048597 Camellia sinensis var. sinensis HOM05D006310 ORTHO05D007768 2.0e-26 123.6 204 44.1
Gorai.004G183900 Gossypium raimondii HOM05D006310 ORTHO05D007768 2.0e-26 123.6 196 44.4
Thecc.03G224800 Theobroma cacao HOM05D006310 ORTHO05D007768 7.6e-26 121.7 210 42.9
Hma1.2p1_0303F.1_g118950 Hydrangea macrophylla HOM05D006310 ORTHO05D007768 1.7e-25 120.6 200 43.0
Nitab4.5_0003625g0020 Nicotiana tabacum HOM05D006310 ORTHO05D007768 3.8e-25 119.4 210 41.0
Duzib084G0468 Durio zibethinus HOM05D006310 ORTHO05D007768 6.5e-25 118.6 211 41.2
Duzib205G0324 Durio zibethinus HOM05D006310 ORTHO05D007768 8.5e-25 118.2 211 40.8
Cc08_g03010 Coffea canephora HOM05D006310 ORTHO05D007768 4.2e-24 115.9 203 42.4
CANSAT21G0851 Cannabis sativa HOM05D006310 ORTHO05D007768 5.5e-24 115.5 197 42.6
Lj2A236G56 Lonicera japonica HOM05D006310 ORTHO05D007768 5.5e-24 115.5 207 43.5
COL.COLO4_16996 Corchorus olitorius HOM05D006310 ORTHO05D007768 7.2e-24 115.2 213 40.4
Eucgr.D02211 Eucalyptus grandis HOM05D006310 ORTHO05D007768 2.7e-23 113.2 212 42.9
THA.LOC104827750 Tarenaya hassleriana HOM05D006310 ORTHO05D007768 2.7e-23 113.2 197 42.1
Gorai.007G033000 Gossypium raimondii HOM05D006310 ORTHO05D007768 3.6e-23 112.8 211 43.1
Oeu006245.1 Olea europaea HOM05D006310 ORTHO05D007768 7.9e-23 111.7 208 43.3
CiPaw.11G095600 Carya illinoinensis HOM05D006310 ORTHO05D007768 1.3e-22 110.9 198 40.9
THA.LOC104806719 Tarenaya hassleriana HOM05D006310 ORTHO05D007768 1.3e-22 110.9 199 41.7
Actinidia03362 Actinidia chinensis HOM05D006310 ORTHO05D007768 1.8e-22 110.5 190 44.2
Nitab4.5_0000127g0100 Nicotiana tabacum HOM05D006310 ORTHO05D007768 5.1e-22 109.0 217 39.6
Gohir.A11G031400 Gossypium hirsutum HOM05D006310 ORTHO05D007768 6.7e-22 108.6 210 42.4
Gohir.D11G030100 Gossypium hirsutum HOM05D006310 ORTHO05D007768 1.1e-21 107.8 211 42.7
Lalb_Chr05g0215911 Lupinus albus HOM05D006310 ORTHO05D007768 1.1e-21 107.8 191 42.4
vmacro00314 Vaccinium macrocarpon HOM05D006310 ORTHO05D007768 1.1e-21 107.8 189 41.3
PGR031G3884 Punica granatum HOM05D006310 ORTHO05D007768 1.5e-21 107.5 208 40.9
Thhalv10026016m.g Eutrema salsugineum HOM05D006310 ORTHO05D007768 2.5e-21 106.7 194 39.2
Prupe.5G032400 Prunus persica HOM05D006310 ORTHO05D007768 7.4e-21 105.1 189 39.2
Solyc08g076730.4 Solanum lycopersicum HOM05D006310 ORTHO05D007768 7.4e-21 105.1 214 39.3
Hma1.2p1_1379F.1_g279220 Hydrangea macrophylla HOM05D006310 ORTHO05D007768 9.7e-21 104.8 195 37.9
TAR629G1434 Trochodendron aralioides HOM05D006310 ORTHO05D007768 9.7e-21 104.8 215 39.5
Sp7g16170 Schrenkiella parvula HOM05D006310 ORTHO05D007768 1.3e-20 104.4 192 37.0
Lj2g0018875 Lotus japonicus HOM05D006310 ORTHO05D007768 2.2e-20 103.6 183 42.1
Sopen08g025280 Solanum pennellii HOM05D006310 ORTHO05D007768 2.2e-20 103.6 214 38.3
MD06G1036900 Malus domestica HOM05D006310 ORTHO05D007768 2.8e-20 103.2 186 41.4
PGSC0003DMG400017523 Solanum tuberosum HOM05D006310 ORTHO05D007768 8.2e-20 101.7 215 38.6
Glyma.01G017000 Glycine max HOM05D006310 ORTHO05D007768 1.4e-19 100.9 189 40.2
Actinidia25977 Actinidia chinensis HOM05D006310 ORTHO05D007768 3.1e-19 99.8 195 39.5
Rhsim11G0017700 Rhododendron simsii HOM05D006310 ORTHO05D007768 3.1e-19 99.8 183 41.5
A08p13440 Brassica napus HOM05D006310 ORTHO05D007768 4.1e-19 99.4 192 37.5
Nn1g00145 Nelumbo nucifera HOM05D006310 ORTHO05D007768 4.1e-19 99.4 219 38.8
BraA08t33321Z Brassica rapa HOM05D006310 ORTHO05D007768 6.9e-19 98.6 192 37.5
arahy.Tifrunner.gnm1.ann1.P6RCLW Arachis hypogaea HOM05D006310 ORTHO05D007768 9.1e-19 98.2 187 38.5
arahy.Tifrunner.gnm1.ann1.U64MAA Arachis hypogaea HOM05D006310 ORTHO05D007768 9.1e-19 98.2 187 38.5
BolC8t48532H Brassica oleracea HOM05D006310 ORTHO05D007768 1.2e-18 97.8 192 37.5
BcaC07g38109 Brassica carinata HOM05D006310 ORTHO05D007768 1.5e-18 97.4 188 37.8
CAN.G298.28 Capsicum annuum HOM05D006310 ORTHO05D007768 4.5e-18 95.9 212 38.7
Aqoxy3G02279 Aquilegia oxysepala HOM05D006310 ORTHO05D007768 5.9e-18 95.5 214 34.1
MBI04_g20344_MAGBIO Magnolia biondii HOM05D006310 ORTHO05D007768 5.9e-18 95.5 216 38.4
FAN18G3281 Fragaria x ananassa HOM05D006310 ORTHO05D007768 7.7e-18 95.1 188 38.3
AT4G17940 Arabidopsis thaliana HOM05D006310 ORTHO05D007768 1.0e-17 94.7 194 37.6
Glyma.09G205800 Glycine max HOM05D006310 ORTHO05D007768 1.0e-17 94.7 186 39.2
Actinidia14793 Actinidia chinensis HOM05D006310 ORTHO05D007768 1.3e-17 94.4 209 38.3
AL7G36570 Arabidopsis lyrata HOM05D006310 ORTHO05D007768 1.3e-17 94.4 194 38.1
Lsat_1_v5_gn_3_18800 Lactuca sativa HOM05D006310 ORTHO05D007768 3.8e-17 92.8 201 37.3
CARHR224680 Cardamine hirsuta HOM05D006310 ORTHO05D007768 8.5e-17 91.7 194 37.1
ClCG09G011810 Citrullus lanatus HOM05D006310 ORTHO05D007768 1.1e-16 91.3 196 37.8
Peaxi162Scf00184g00001 Petunia axillaris HOM05D006310 ORTHO05D007768 1.1e-16 91.3 202 37.1
Carub.0007s2340 Capsella rubella HOM05D006310 ORTHO05D007768 1.4e-16 90.9 199 37.2
Aa31LG6G690 Aethionema arabicum HOM05D006310 ORTHO05D007768 2.5e-16 90.1 190 35.8
ECA246G3187 Erigeron canadensis HOM05D006310 ORTHO05D007768 2.5e-16 90.1 192 39.6
FvH4_5g22450 Fragaria vesca HOM05D006310 ORTHO05D007768 2.5e-16 90.1 188 37.2
Sed0010075 Sechium edule HOM05D006310 ORTHO05D007768 2.5e-16 90.1 199 37.2
DCAR_008251 Daucus carota HOM05D006310 ORTHO05D007768 4.2e-16 89.4 199 37.2
FAN18G0493 Fragaria x ananassa HOM05D006310 ORTHO05D007768 9.4e-16 88.2 188 37.8
FAN08G3522 Fragaria x ananassa HOM05D006310 ORTHO05D007768 1.6e-15 87.4 188 36.2
PSO063G6445 Papaver somniferum HOM05D006310 ORTHO05D007768 1.6e-15 87.4 207 37.7
PSO782G4606 Papaver somniferum HOM05D006310 ORTHO05D007768 2.7e-15 86.7 208 37.5
Actinidia09184 Actinidia chinensis HOM05D006310 ORTHO05D007768 3.6e-15 86.3 208 37.5
MELO3C003424.2 Cucumis melo HOM05D006310 ORTHO05D007768 3.6e-15 86.3 184 41.3
FAN04G1670 Fragaria x ananassa HOM05D006310 ORTHO05D007768 6.1e-15 85.5 188 36.2
BcaB04g18451 Brassica carinata HOM05D006310 ORTHO05D007768 1.8e-14 84.0 190 35.8
BcaNung00042 Brassica carinata HOM05D006310 ORTHO05D007768 1.8e-14 84.0 192 37.0
CsaV3_3G049010 Cucumis sativus L. HOM05D006310 ORTHO05D007768 3.0e-14 83.2 196 38.8
Ca_25198_v3 Cicer arietinum L. HOM05D006310 ORTHO05D007768 3.9e-14 82.8 192 37.0
VMungo1215G2715 Vigna mungo HOM05D006310 ORTHO05D007768 5.1e-14 82.4 186 37.6
VMungo1080G0874 Vigna mungo HOM05D006310 ORTHO05D007768 6.7e-14 82.0 186 36.0
BcaC09g51583 Brassica carinata HOM05D006310 ORTHO05D007768 1.5e-13 80.9 188 34.6
Phvul.002G140000 Phaseolus vulgaris HOM05D006310 ORTHO05D007768 2.0e-13 80.5 183 37.7
C01p11780 Brassica napus HOM05D006310 ORTHO05D007768 2.6e-13 80.1 192 34.9
MSTRG.13750 Avicennia marina HOM05D006310 ORTHO05D007768 4.4e-13 79.3 193 36.3
BolC1t01140H Brassica oleracea HOM05D006310 ORTHO05D007768 1.7e-12 77.4 188 33.5
Psat2g137200 Pisum sativum HOM05D006310 ORTHO05D007768 3.7e-12 76.3 189 39.2
RcHm_v2.0_Chr7g0210241 Rosa chinensis HOM05D006310 ORTHO05D007768 3.7e-12 76.3 146 37.0
GSVIVG01013133001 Vitis vinifera HOM05D006310 ORTHO05D007768 3.7e-12 76.3 124 41.1
CDE06G1171 Ceratophyllum demersum HOM05D006310 ORTHO05D007768 6.3e-12 75.5 188 31.9
Medtr5g029910 Medicago truncatula HOM05D006310 ORTHO05D007768 8.2e-12 75.1 189 37.0
Nn3g19447 Nelumbo nucifera HOM05D006310 ORTHO05D007768 1.1e-11 74.7 206 35.0
HanXRQChr17g0536151 Helianthus annuus HOM05D006310 ORTHO05D007768 1.4e-11 74.3 198 35.4
BraA01t00942Z Brassica rapa HOM05D006310 ORTHO05D007768 1.8e-11 73.9 188 31.4
A01p09980 Brassica napus HOM05D006310 ORTHO05D007768 2.4e-11 73.6 188 33.0
CDE11G1127 Ceratophyllum demersum HOM05D006310 ORTHO05D007768 2.4e-11 73.6 212 33.5
HPP92_014659 Vanilla planifolia HOM05D006310 ORTHO05D007768 9.1e-11 71.6 165 36.4
Hund14348 Selenicereus undatus HOM05D006310 ORTHO05D007768 1.2e-10 71.2 190 31.6
ATR0665G126 Amborella trichopoda HOM05D006310 ORTHO05D007768 1.5e-10 70.9 222 36.0
CDE02G1298 Ceratophyllum demersum HOM05D006310 ORTHO05D007768 4.5e-10 69.3 204 33.8
HanXRQChr06g0167641 Helianthus annuus HOM05D006310 ORTHO05D007768 5.9e-10 68.9 201 33.8
Ah.07g200600 Amaranthus hybridus HOM05D006310 ORTHO05D007768 1.7e-09 67.4 187 34.8
EL10Ac5g12081 Beta vulgaris HOM05D006310 ORTHO05D007768 5.0e-09 65.9 194 34.0
Migut.E00791 Erythranthe guttata HOM05D006310 ORTHO05D007768 7.2e-08 62.0 193 32.1
Lsat_1_v5_gn_7_107661 Lactuca sativa HOM05D001903 ORTHO05D001847 1.0e-06 58.2 190 31.1
Zm00001eb024820 Zea mays HOM05D006310 ORTHO05D007768 3.0e-06 56.6 132 36.4
CSS0008952 Camellia sinensis var. sinensis HOM05D001903 ORTHO05D001847 8.8e-06 55.1 166 29.5


User provided reference genes

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