Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra01G0103300 Salix brachista HOM05D006875 ORTHO05D008416 9.7e-110 400.2 210 100.0
Potri.001G133600 Populus trichocarpa HOM05D006875 ORTHO05D008416 2.8e-72 275.8 210 75.2
Sabra03G0067900 Salix brachista HOM05D006875 ORTHO05D008416 5.4e-60 235.0 254 56.3
Potri.003G099900 Populus trichocarpa HOM05D006875 ORTHO05D008416 3.9e-50 202.2 208 59.6
Duzib205G1866 Durio zibethinus HOM05D006875 ORTHO05D008416 1.3e-37 160.6 219 50.2
CiPaw.12G070200 Carya illinoinensis HOM05D006875 ORTHO05D008416 1.7e-37 160.2 218 49.1
Gohir.D08G173100 Gossypium hirsutum HOM05D006875 ORTHO05D008416 9.3e-36 154.5 218 50.9
arahy.Tifrunner.gnm1.ann1.7H2E39 Arachis hypogaea HOM05D006875 ORTHO05D008416 1.8e-34 150.2 91 83.5
arahy.Tifrunner.gnm1.ann1.J2I619 Arachis hypogaea HOM05D006875 ORTHO05D008416 1.8e-34 150.2 91 83.5
Duzib068G0693 Durio zibethinus HOM05D006875 ORTHO05D008416 1.8e-34 150.2 107 73.8
Prupe.5G024300 Prunus persica HOM05D006875 ORTHO05D008416 2.3e-34 149.8 214 49.1
Lalb_Chr05g0215561 Lupinus albus HOM05D006875 ORTHO05D008416 3.9e-34 149.1 93 81.7
RcHm_v2.0_Chr7g0212891 Rosa chinensis HOM05D006875 ORTHO05D008416 3.9e-34 149.1 219 47.9
Ca_25148_v3 Cicer arietinum L. HOM05D006875 ORTHO05D008416 8.7e-34 147.9 102 76.5
Lalb_Chr16g0380861 Lupinus albus HOM05D006875 ORTHO05D008416 5.7e-33 145.2 91 81.3
VMungo1215G2146 Vigna mungo HOM05D006875 ORTHO05D008416 7.4e-33 144.8 101 77.2
Medtr5g027470 Medicago truncatula HOM05D006875 ORTHO05D008416 1.3e-32 144.1 211 48.8
GSVIVG01011544001 Vitis vinifera HOM05D006875 ORTHO05D008416 4.8e-32 142.1 109 66.1
PGSC0003DMG400020470 Solanum tuberosum HOM05D006875 ORTHO05D008416 1.1e-31 141.0 211 46.0
Sopen06g024670 Solanum pennellii HOM05D006875 ORTHO05D008416 1.4e-31 140.6 211 46.9
Solyc06g066190.3 Solanum lycopersicum HOM05D006875 ORTHO05D008416 1.8e-31 140.2 211 46.4
THA.LOC104806179 Tarenaya hassleriana HOM05D006875 ORTHO05D008416 1.8e-31 140.2 221 44.8
Nitab4.5_0000109g0180 Nicotiana tabacum HOM05D006875 ORTHO05D008416 2.4e-31 139.8 211 46.0
Peaxi162Scf00185g01627 Petunia axillaris HOM05D006875 ORTHO05D008416 5.3e-31 138.7 115 66.1
Dinv29039 Davidia involucrata HOM05D006875 ORTHO05D008416 9.0e-31 137.9 217 44.2
Glyma.01G009800 Glycine max HOM05D006875 ORTHO05D008416 9.0e-31 137.9 98 75.5
Lj2g0021598 Lotus japonicus HOM05D006875 ORTHO05D008416 9.0e-31 137.9 100 72.0
Phvul.002G132700 Phaseolus vulgaris HOM05D006875 ORTHO05D008416 9.0e-31 137.9 126 64.3
AL8G13090 Arabidopsis lyrata HOM05D006875 ORTHO05D008416 1.2e-30 137.5 212 43.9
Actinidia14761 Actinidia chinensis HOM05D006875 ORTHO05D008416 1.5e-30 137.1 223 45.3
Cc08_g04080 Coffea canephora HOM05D006875 ORTHO05D008416 2.0e-30 136.7 210 45.2
BcaC06g31539 Brassica carinata HOM05D006875 ORTHO05D008416 2.6e-30 136.3 220 43.2
Manes.17G011100 Manihot esculenta HOM05D006875 ORTHO05D008416 2.6e-30 136.3 217 47.5
Actinidia18144 Actinidia chinensis HOM05D006875 ORTHO05D008416 3.4e-30 136.0 223 46.6
Sed0011128 Sechium edule HOM05D006875 ORTHO05D008416 3.4e-30 136.0 216 46.8
BolC7t43404H Brassica oleracea HOM05D006875 ORTHO05D008416 5.8e-30 135.2 220 43.6
Sp2g10480 Schrenkiella parvula HOM05D006875 ORTHO05D008416 7.6e-30 134.8 220 44.5
Thhalv10001052m.g Eutrema salsugineum HOM05D006875 ORTHO05D008416 1.0e-29 134.4 98 69.4
Glyma.09G211300 Glycine max HOM05D006875 ORTHO05D008416 1.0e-29 134.4 98 74.5
A06p46520 Brassica napus HOM05D006875 ORTHO05D008416 1.7e-29 133.7 221 43.9
BraA06t27526Z Brassica rapa HOM05D006875 ORTHO05D008416 1.7e-29 133.7 221 43.9
BcaC03g16779 Brassica carinata HOM05D006875 ORTHO05D008416 2.2e-29 133.3 98 69.4
BolC2t10706H Brassica oleracea HOM05D006875 ORTHO05D008416 2.2e-29 133.3 98 69.4
Oeu044464.1 Olea europaea HOM05D006875 ORTHO05D008416 2.9e-29 132.9 93 72.0
BcaC06g34424 Brassica carinata HOM05D006875 ORTHO05D008416 8.4e-29 131.3 220 43.2
C07p28660 Brassica napus HOM05D006875 ORTHO05D008416 8.4e-29 131.3 220 43.2
Ah.12g055650 Amaranthus hybridus HOM05D006875 ORTHO05D008416 1.1e-28 131.0 212 42.0
CARHR176440 Cardamine hirsuta HOM05D006875 ORTHO05D008416 1.1e-28 131.0 214 42.5
Carub.0008s0244 Capsella rubella HOM05D006875 ORTHO05D008416 1.4e-28 130.6 220 42.3
TPR.G9090 Trifolium pratense HOM05D006875 ORTHO05D008416 1.4e-28 130.6 216 44.9
Nitab4.5_0005761g0030 Nicotiana tabacum HOM05D006875 ORTHO05D008416 1.9e-28 130.2 227 43.2
C02p46480 Brassica napus HOM05D006875 ORTHO05D008416 2.5e-28 129.8 98 68.4
SalBow4G1271 Salvia bowleyana HOM05D006875 ORTHO05D008416 2.5e-28 129.8 96 69.8
SGA_v2.0_scaffold144G35866 Striga asiatica HOM05D006875 ORTHO05D008416 2.5e-28 129.8 97 69.1
Aa31LG9G7450 Aethionema arabicum HOM05D006875 ORTHO05D008416 3.2e-28 129.4 98 67.3
MSTRG.13901 Avicennia marina HOM05D006875 ORTHO05D008416 4.2e-28 129.0 219 41.6
EL10Ac5g11986 Beta vulgaris HOM05D006875 ORTHO05D008416 4.2e-28 129.0 125 56.0
AT5G45590 Arabidopsis thaliana HOM05D006875 ORTHO05D008416 9.3e-28 127.9 212 41.5
CSS0027486 Camellia sinensis var. sinensis HOM05D006875 ORTHO05D008416 9.3e-28 127.9 211 43.6
CsaV3_3G030390 Cucumis sativus L. HOM05D006875 ORTHO05D008416 9.3e-28 127.9 216 44.0
Nn1g01960 Nelumbo nucifera HOM05D006875 ORTHO05D008416 1.2e-27 127.5 91 73.6
CDE05G0418 Ceratophyllum demersum HOM05D006875 ORTHO05D008416 1.6e-27 127.1 139 52.5
Hund14386 Selenicereus undatus HOM05D006875 ORTHO05D008416 1.6e-27 127.1 90 70.0
TAR629G1490 Trochodendron aralioides HOM05D006875 ORTHO05D008416 2.1e-27 126.7 91 73.6
Thecc.03G314400 Theobroma cacao HOM05D006875 ORTHO05D008416 3.5e-27 125.9 216 44.9
A02p29280 Brassica napus HOM05D006875 ORTHO05D008416 4.6e-27 125.6 79 78.5
BraA02t07958Z Brassica rapa HOM05D006875 ORTHO05D008416 4.6e-27 125.6 79 78.5
unitig_0.g2213 Utricularia gibba HOM05D006875 ORTHO05D008416 4.6e-27 125.6 98 66.3
Cfa012555 Carpinus fangiana HOM05D006875 ORTHO05D008416 1.0e-26 124.4 216 44.0
Gohir.A08G152100 Gossypium hirsutum HOM05D006875 ORTHO05D008416 1.0e-26 124.4 218 45.4
Migut.E01333 Erythranthe guttata HOM05D006875 ORTHO05D008416 1.3e-26 124.0 96 66.7
TWI23G0606 Tripterygium wilfordii HOM05D006875 ORTHO05D008416 1.1e-25 120.9 219 43.4
FAN04G1681 Fragaria x ananassa HOM05D006875 ORTHO05D008416 1.9e-25 120.2 212 43.9
FAN08G3065 Fragaria x ananassa HOM05D006875 ORTHO05D008416 1.9e-25 120.2 213 44.1
FAN13G1224 Fragaria x ananassa HOM05D006875 ORTHO05D008416 2.5e-25 119.8 212 43.4
Sc01g0006090 Simmondsia chinensis HOM05D006875 ORTHO05D008416 2.5e-25 119.8 90 66.7
FvH4_5g23590 Fragaria vesca HOM05D006875 ORTHO05D008416 1.3e-24 117.5 213 43.2
FAN18G3946 Fragaria x ananassa HOM05D006875 ORTHO05D008416 1.3e-24 117.5 213 43.2
Atru.chr6.1576 Acer truncatum HOM05D006875 ORTHO05D008416 1.6e-24 117.1 213 44.1
MELO3C022766.2 Cucumis melo HOM05D006875 ORTHO05D008416 2.2e-24 116.7 217 41.9
FAN18G3512 Fragaria x ananassa HOM05D006875 ORTHO05D008416 8.2e-24 114.8 213 42.3
HanXRQChr16g0510981 Helianthus annuus HOM05D006875 ORTHO05D008416 1.1e-23 114.4 94 62.8
Zm00001eb025290 Zea mays HOM05D006875 ORTHO05D008416 1.4e-23 114.0 89 67.4
Eucgr.D02619 Eucalyptus grandis HOM05D006875 ORTHO05D008416 1.8e-23 113.6 208 43.3
Gorai.004G180500 Gossypium raimondii HOM05D006875 ORTHO05D008416 3.1e-23 112.8 212 44.3
PSO063G1678 Papaver somniferum HOM05D006875 ORTHO05D008416 3.1e-23 112.8 98 65.3
PSO782G2435 Papaver somniferum HOM05D006875 ORTHO05D008416 3.1e-23 112.8 98 65.3
Ciclev10002495m.g Citrus clementina HOM05D006875 ORTHO05D008416 9.0e-23 111.3 209 41.6
Os10g0579500 Oryza sativa ssp. japonica HOM05D006875 ORTHO05D008416 9.0e-23 111.3 89 65.2
Hma1.2p1_0979F.1_g243510 Hydrangea macrophylla HOM05D006875 ORTHO05D008416 1.5e-22 110.5 221 37.1
Cpa.g.c33846 Carica papaya HOM05D006875 ORTHO05D008416 4.5e-22 109.0 66 81.8
CANSAT21G2454 Cannabis sativa HOM05D006875 ORTHO05D008416 1.3e-21 107.5 94 63.8
Aqoxy3G02082 Aquilegia oxysepala HOM05D006875 ORTHO05D008416 3.8e-21 105.9 90 62.2
Haze_08105 Corylus avellana HOM05D006875 ORTHO05D008416 6.5e-21 105.1 63 82.5
Psat2g139680 Pisum sativum HOM05D006875 ORTHO05D008416 8.5e-21 104.8 188 44.7
MD00G1000200 Malus domestica HOM05D006875 ORTHO05D008416 1.8e-18 97.1 111 53.2
HPP92_025490 Vanilla planifolia HOM05D006875 ORTHO05D008416 1.5e-17 94.0 69 71.0
COL.COLO4_16883 Corchorus olitorius HOM05D006875 ORTHO05D008416 2.0e-17 93.6 110 51.8
Haze_08111 Corylus avellana HOM05D006875 ORTHO05D008416 3.3e-17 92.8 190 41.1
Mapoly0025s0027 Marchantia polymorpha HOM05D006875 ORTHO05D008416 2.2e-16 90.1 67 67.2
ATR0829G201 Amborella trichopoda HOM05D006875 ORTHO05D008416 4.1e-15 85.9 61 70.5
Pp3c9_12060 Physcomitrium patens HOM05D006875 ORTHO05D008416 1.5e-14 84.0 67 62.7
SHI45156 Sapria himalayana HOM05D006875 ORTHO05D008416 1.5e-14 84.0 76 59.2
ECA233G1303 Erigeron canadensis HOM05D000321 ORTHO05D000204 2.0e-14 83.6 66 62.1
ClCG07G002300 Citrullus lanatus HOM05D006875 ORTHO05D008416 3.4e-14 82.8 188 39.9
CDE11G0569 Ceratophyllum demersum HOM05D006875 ORTHO05D008416 7.7e-14 81.6 69 63.8
vmacro14218 Vaccinium macrocarpon HOM05D006875 ORTHO05D008416 7.7e-14 81.6 294 30.6
RcHm_v2.0_Chr1g0382651 Rosa chinensis HOM05D006875 ORTHO05D008416 1.4e-12 77.4 45 77.8
QL12p000430 Quercus lobata HOM05D006875 ORTHO05D008416 2.5e-12 76.6 176 36.9
Rhsim07G0136500 Rhododendron simsii HOM05D006875 ORTHO05D008416 1.2e-11 74.3 198 37.9
AagrBONN_evm.TU.Sc2ySwM_362.254 Anthoceros agrestis HOM05D006875 ORTHO05D008416 4.7e-11 72.4 67 56.7
PGR031G1815 Punica granatum HOM05D006875 ORTHO05D008416 4.7e-11 72.4 63 61.9
SEGI_22250 Sequoiadendron giganteum HOM05D006875 ORTHO05D008416 3.3e-09 66.2 66 53.0
Lsat_1_v5_gn_3_43041 Lactuca sativa HOM05D006875 ORTHO05D008416 1.3e-08 64.3 115 40.9
MD06G1023100 Malus domestica HOM05D006875 ORTHO05D008416 4.8e-08 62.4 66 54.5


User provided reference genes

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