Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra01G0097600 Salix brachista HOM05D003935 ORTHO05D005096 1.4e-181 639.4 316 100.0
Potri.001G126500 Populus trichocarpa HOM05D003935 ORTHO05D005096 2.7e-172 608.6 316 94.9
Manes.06G132800 Manihot esculenta HOM05D003935 ORTHO05D005096 2.2e-166 589.0 316 91.5
Potri.003G107000 Populus trichocarpa HOM05D003935 ORTHO05D005096 3.8e-166 588.2 317 92.1
Eucgr.K00175 Eucalyptus grandis HOM05D003935 ORTHO05D005096 2.3e-163 578.9 314 89.8
Migut.F00500 Erythranthe guttata HOM05D003935 ORTHO05D005096 4.3e-162 574.7 316 89.2
CSS0046772 Camellia sinensis var. sinensis HOM05D003935 ORTHO05D005096 3.7e-161 571.6 316 88.3
TWI14G1423 Tripterygium wilfordii HOM05D003935 ORTHO05D005096 1.8e-160 569.3 316 88.0
PGR142G1672 Punica granatum HOM05D003935 ORTHO05D005096 2.4e-160 568.9 315 88.3
Nn6g33882 Nelumbo nucifera HOM05D003935 ORTHO05D005096 6.9e-160 567.4 316 88.0
Oeu031400.2 Olea europaea HOM05D003935 ORTHO05D005096 1.2e-159 566.6 317 87.7
Solyc06g034160.3 Solanum lycopersicum HOM05D003935 ORTHO05D005096 2.6e-159 565.5 316 87.0
Dinv16851 Davidia involucrata HOM05D003935 ORTHO05D005096 5.9e-159 564.3 316 87.3
MSTRG.27208 Avicennia marina HOM05D003935 ORTHO05D005096 7.7e-159 563.9 316 87.7
Sopen06g010820 Solanum pennellii HOM05D003935 ORTHO05D005096 7.7e-159 563.9 316 86.7
Nitab4.5_0000448g0060 Nicotiana tabacum HOM05D003935 ORTHO05D005096 1.0e-158 563.5 311 87.5
SGA_v2.0_scaffold44G16558 Striga asiatica HOM05D003935 ORTHO05D005096 1.0e-158 563.5 314 86.9
Peaxi162Scf00304g01342 Petunia axillaris HOM05D003935 ORTHO05D005096 1.7e-158 562.8 310 88.4
Lalb_Chr19g0126281 Lupinus albus HOM05D003935 ORTHO05D005096 2.2e-158 562.4 316 86.4
CANSAT21G2109 Cannabis sativa HOM05D003935 ORTHO05D005096 2.9e-158 562.0 316 86.7
Hma1.2p1_0432F.1_g151940 Hydrangea macrophylla HOM05D003935 ORTHO05D005096 3.8e-158 561.6 314 86.3
Hma1.2p1_1132F.1_g260170 Hydrangea macrophylla HOM05D003935 ORTHO05D005096 3.8e-158 561.6 314 86.9
Glyma.09G231000 Glycine max HOM05D003935 ORTHO05D005096 5.0e-158 561.2 314 86.6
vmacro09915 Vaccinium macrocarpon HOM05D003935 ORTHO05D005096 6.5e-158 560.8 316 86.4
CAN.G330.5 Capsicum annuum HOM05D003935 ORTHO05D005096 8.5e-158 560.5 316 86.4
Sabra03G0073800 Salix brachista HOM05D003935 ORTHO05D005096 8.5e-158 560.5 383 76.5
TAR374G1483 Trochodendron aralioides HOM05D003935 ORTHO05D005096 8.5e-158 560.5 316 86.1
Aqoxy7G00829 Aquilegia oxysepala HOM05D003935 ORTHO05D005096 1.4e-157 559.7 314 86.3
CSS0045715 Camellia sinensis var. sinensis HOM05D003935 ORTHO05D005096 5.5e-157 557.8 316 86.7
GSVIVG01018224001 Vitis vinifera HOM05D003935 ORTHO05D005096 5.5e-157 557.8 316 85.8
PGSC0003DMG400021594 Solanum tuberosum HOM05D003935 ORTHO05D005096 1.2e-156 556.6 311 86.8
CARHR275270 Cardamine hirsuta HOM05D003935 ORTHO05D005096 2.7e-156 555.4 316 84.8
Lj1C977G12 Lonicera japonica HOM05D003935 ORTHO05D005096 3.6e-156 555.1 339 82.0
Actinidia01047 Actinidia chinensis HOM05D003935 ORTHO05D005096 6.1e-156 554.3 316 84.8
Thhalv10004633m.g Eutrema salsugineum HOM05D003935 ORTHO05D005096 6.1e-156 554.3 317 85.5
QL04p034713 Quercus lobata HOM05D003935 ORTHO05D005096 6.1e-156 554.3 315 85.7
Sp2g24700 Schrenkiella parvula HOM05D003935 ORTHO05D005096 6.1e-156 554.3 316 84.8
AL8G38190 Arabidopsis lyrata HOM05D003935 ORTHO05D005096 7.9e-156 553.9 316 84.2
Cfa012922 Carpinus fangiana HOM05D003935 ORTHO05D005096 7.9e-156 553.9 316 84.5
COL.COLO4_12445 Corchorus olitorius HOM05D003935 ORTHO05D005096 2.3e-155 552.4 316 85.4
Carub.0008s2219 Capsella rubella HOM05D003935 ORTHO05D005096 3.9e-155 551.6 316 84.2
Thecc.01G388100 Theobroma cacao HOM05D003935 ORTHO05D005096 3.9e-155 551.6 316 86.1
Cpa.g.sc16.168 Carica papaya HOM05D003935 ORTHO05D005096 5.1e-155 551.2 316 85.1
Rhsim09G0190400 Rhododendron simsii HOM05D003935 ORTHO05D005096 6.7e-155 550.8 331 82.5
SalBow1G3743 Salvia bowleyana HOM05D003935 ORTHO05D005096 6.7e-155 550.8 316 85.4
Lalb_Chr01g0000281 Lupinus albus HOM05D003935 ORTHO05D005096 8.8e-155 550.4 316 85.8
DCAR_020181 Daucus carota HOM05D003935 ORTHO05D005096 1.5e-154 549.7 316 85.1
Atru.chr1.845 Acer truncatum HOM05D003935 ORTHO05D005096 2.6e-154 548.9 314 85.0
Glyma.12G005700 Glycine max HOM05D003935 ORTHO05D005096 3.3e-154 548.5 316 84.8
Thhalv10014155m.g Eutrema salsugineum HOM05D003935 ORTHO05D005096 5.7e-154 547.7 316 84.5
AT5G61500 Arabidopsis thaliana HOM05D003935 ORTHO05D005096 7.4e-154 547.4 316 83.2
Duzib133G0969 Durio zibethinus HOM05D003935 ORTHO05D005096 7.4e-154 547.4 317 85.2
Gohir.D08G159150 Gossypium hirsutum HOM05D003935 ORTHO05D005096 9.7e-154 547.0 317 85.5
Gorai.004G165200 Gossypium raimondii HOM05D003935 ORTHO05D005096 9.7e-154 547.0 317 85.5
Nitab4.5_0000262g0090 Nicotiana tabacum HOM05D003935 ORTHO05D005096 9.7e-154 547.0 311 85.5
PSO782G0781 Papaver somniferum HOM05D003935 ORTHO05D005096 1.3e-153 546.6 315 85.1
TPR.G3680 Trifolium pratense HOM05D003935 ORTHO05D005096 1.3e-153 546.6 316 84.5
THA.LOC104819415 Tarenaya hassleriana HOM05D003935 ORTHO05D005096 1.7e-153 546.2 316 84.8
AUR62002246 Chenopodium quinoa HOM05D003935 ORTHO05D005096 2.2e-153 545.8 314 85.0
HanXRQChr15g0485951 Helianthus annuus HOM05D003935 ORTHO05D005096 2.2e-153 545.8 316 82.3
Medtr4g036265 Medicago truncatula HOM05D003935 ORTHO05D005096 4.8e-153 544.7 316 84.2
PSO063G2499 Papaver somniferum HOM05D003935 ORTHO05D005096 4.8e-153 544.7 315 84.8
Gohir.A08G137866 Gossypium hirsutum HOM05D003935 ORTHO05D005096 6.3e-153 544.3 317 84.9
Sp6g35250 Schrenkiella parvula HOM05D003935 ORTHO05D005096 1.8e-152 542.7 316 83.5
THA.LOC104801570 Tarenaya hassleriana HOM05D003935 ORTHO05D005096 1.8e-152 542.7 316 83.5
BcaC06g33155 Brassica carinata HOM05D003935 ORTHO05D005096 3.1e-152 542.0 314 83.8
CsaV3_6G008640 Cucumis sativus L. HOM05D003935 ORTHO05D005096 3.1e-152 542.0 315 82.9
ClCG06G002480 Citrullus lanatus HOM05D003935 ORTHO05D005096 4.1e-152 541.6 315 83.2
Aa31LG11G1910 Aethionema arabicum HOM05D003935 ORTHO05D005096 5.3e-152 541.2 313 84.0
MSTRG.8834 Avicennia marina HOM05D003935 ORTHO05D005096 5.3e-152 541.2 316 82.6
MELO3C022280.2 Cucumis melo HOM05D003935 ORTHO05D005096 5.3e-152 541.2 315 82.9
Duzib138G0818 Durio zibethinus HOM05D003935 ORTHO05D005096 7.0e-152 540.8 317 85.2
QL02p025668 Quercus lobata HOM05D003935 ORTHO05D005096 9.1e-152 540.4 315 83.8
Psat7g207040 Pisum sativum HOM05D003935 ORTHO05D005096 2.6e-151 538.9 316 83.5
Gohir.D07G154200 Gossypium hirsutum HOM05D003935 ORTHO05D005096 4.5e-151 538.1 317 84.5
Gorai.001G176400 Gossypium raimondii HOM05D003935 ORTHO05D005096 4.5e-151 538.1 317 84.5
Lj3g0013928 Lotus japonicus HOM05D003935 ORTHO05D005096 4.5e-151 538.1 316 82.0
VMungo1127G0071 Vigna mungo HOM05D003935 ORTHO05D005096 5.9e-151 537.7 316 83.2
Lsat_1_v5_gn_5_9340 Lactuca sativa HOM05D003935 ORTHO05D005096 1.0e-150 537.0 316 81.6
Sed0016106 Sechium edule HOM05D003935 ORTHO05D005096 1.0e-150 537.0 315 82.2
Cc02_g04470 Coffea canephora HOM05D003935 ORTHO05D005096 1.7e-150 536.2 319 81.2
HanXRQChr16g0512861 Helianthus annuus HOM05D003935 ORTHO05D005096 2.2e-150 535.8 316 81.3
CiPaw.14G023500 Carya illinoinensis HOM05D003935 ORTHO05D005096 2.9e-150 535.4 316 83.2
arahy.Tifrunner.gnm1.ann1.YZL4IN Arachis hypogaea HOM05D003935 ORTHO05D005096 3.8e-150 535.0 315 83.5
Gohir.A07G148000 Gossypium hirsutum HOM05D003935 ORTHO05D005096 6.5e-150 534.3 317 83.6
Actinidia13591 Actinidia chinensis HOM05D003935 ORTHO05D005096 1.9e-149 532.7 310 84.8
Phvul.011G006500 Phaseolus vulgaris HOM05D003935 ORTHO05D005096 2.5e-149 532.3 316 82.9
Haze_21276 Corylus avellana HOM05D003935 ORTHO05D005096 7.2e-149 530.8 323 81.4
BcaB05g21604 Brassica carinata HOM05D003935 ORTHO05D005096 8.0e-148 527.3 318 83.0
BolC7t45044H Brassica oleracea HOM05D003935 ORTHO05D005096 8.0e-148 527.3 315 82.2
CDE04G2838 Ceratophyllum demersum HOM05D003935 ORTHO05D005096 1.8e-147 526.2 303 84.8
Rhsim03G0165100 Rhododendron simsii HOM05D003935 ORTHO05D005096 1.8e-147 526.2 338 78.1
C07p45210 Brassica napus HOM05D003935 ORTHO05D005096 5.2e-147 524.6 315 81.9
FAN03G1633 Fragaria x ananassa HOM05D003935 ORTHO05D005096 8.8e-147 523.9 318 83.3
unitig_37.g12492 Utricularia gibba HOM05D003935 ORTHO05D005096 8.8e-147 523.9 316 82.0
FvH4_7g09530 Fragaria vesca HOM05D003935 ORTHO05D005096 2.6e-146 522.3 318 83.0
FAN06G5089 Fragaria x ananassa HOM05D003935 ORTHO05D005096 2.6e-146 522.3 318 83.0
FAN06G4162 Fragaria x ananassa HOM05D003935 ORTHO05D005096 3.3e-146 521.9 318 83.0
FAN01G1603 Fragaria x ananassa HOM05D003935 ORTHO05D005096 4.4e-146 521.5 318 82.7
FAN10G2569 Fragaria x ananassa HOM05D003935 ORTHO05D005096 7.4e-146 520.8 318 82.7
FAN10G4028 Fragaria x ananassa HOM05D003935 ORTHO05D005096 7.4e-146 520.8 318 82.7
MD02G1218100 Malus domestica HOM05D003935 ORTHO05D005096 2.2e-145 519.2 316 82.9
RcHm_v2.0_Chr1g0346321 Rosa chinensis HOM05D003935 ORTHO05D005096 2.8e-145 518.8 318 83.0
Prupe.2G123000 Prunus persica HOM05D003935 ORTHO05D005096 3.7e-145 518.5 316 81.3
arahy.Tifrunner.gnm1.ann1.2B4GQV Arachis hypogaea HOM05D003935 ORTHO05D005096 1.1e-144 516.9 315 80.6
arahy.Tifrunner.gnm1.ann1.16SP4W Arachis hypogaea HOM05D003935 ORTHO05D005096 1.8e-144 516.2 315 80.6
Hund04562 Selenicereus undatus HOM05D003935 ORTHO05D005096 4.1e-144 515.0 311 81.4
Ciclev10005442m.g Citrus clementina HOM05D003935 ORTHO05D005096 9.1e-144 513.8 321 79.1
BolC2t06285H Brassica oleracea HOM05D003935 ORTHO05D005096 1.6e-143 513.1 316 79.7
ECA232G4201 Erigeron canadensis HOM05D003935 ORTHO05D005096 5.0e-142 508.1 297 81.5
arahy.Tifrunner.gnm1.ann1.9TCX0P Arachis hypogaea HOM05D003935 ORTHO05D005096 2.7e-140 502.3 310 80.6
BcaC03g13194 Brassica carinata HOM05D003935 ORTHO05D005096 2.3e-139 499.2 316 79.7
BraA02t04926Z Brassica rapa HOM05D003935 ORTHO05D005096 8.8e-139 497.3 316 79.1
EL10Ac3g05885 Beta vulgaris HOM05D003935 ORTHO05D005096 3.4e-138 495.4 286 84.3
C02p03220 Brassica napus HOM05D004498 ORTHO05D005300 3.7e-137 491.9 312 79.2
Sc10g0008570 Simmondsia chinensis HOM05D003935 ORTHO05D005096 4.1e-136 488.4 284 82.7
Ah.07g207480 Amaranthus hybridus HOM05D003935 ORTHO05D005096 1.2e-135 486.9 289 83.0
Aa31LG3G18800 Aethionema arabicum HOM05D003935 ORTHO05D005096 5.9e-135 484.6 314 78.3
Mapoly0003s0208 Marchantia polymorpha HOM05D003935 ORTHO05D005096 1.3e-134 483.4 321 73.8
Nitab4.5_0001267g0110 Nicotiana tabacum HOM05D003935 ORTHO05D005096 2.2e-134 482.6 283 82.7
Ca_12623_v3 Cicer arietinum L. HOM05D003935 ORTHO05D005096 8.5e-134 480.7 316 76.9
BraA03t13837Z Brassica rapa HOM05D003935 ORTHO05D005096 1.9e-133 479.6 315 76.8
CiPaw.07G237000 Carya illinoinensis HOM05D003935 ORTHO05D005096 4.2e-133 478.4 327 73.7
A03p47100 Brassica napus HOM05D003935 ORTHO05D005096 5.5e-133 478.0 314 76.8
Pp3c8_11900 Physcomitrium patens HOM05D003935 ORTHO05D005096 1.8e-131 473.0 311 74.6
Haze_02753 Corylus avellana HOM05D003935 ORTHO05D005096 1.2e-130 470.3 463 56.6
Lsat_1_v5_gn_9_51820 Lactuca sativa HOM05D003935 ORTHO05D005096 2.6e-130 469.2 314 74.5
SMO134G0003 Selaginella moellendorffii HOM05D003935 ORTHO05D005096 9.5e-125 450.7 313 68.1
Os01g0200000 Oryza sativa ssp. japonica HOM05D003935 ORTHO05D005096 1.1e-120 437.2 317 69.4
BcaC06g33158 Brassica carinata HOM05D003935 ORTHO05D005096 3.2e-120 435.6 263 82.1
Actinidia24986 Actinidia chinensis HOM05D003935 ORTHO05D005096 2.0e-119 433.0 241 86.7
ATR0057G070 Amborella trichopoda HOM05D003935 ORTHO05D005096 1.4e-115 420.2 285 71.9
Zm00001eb391210 Zea mays HOM05D003935 ORTHO05D005096 4.4e-114 415.2 315 67.0
AUR62015457 Chenopodium quinoa HOM05D003935 ORTHO05D005096 1.2e-98 364.0 214 81.8
CBR_g28076 Chara braunii HOM05D003935 ORTHO05D000002 2.4e-83 313.2 252 59.9
MD07G1099100 Malus domestica HOM05D003935 ORTHO05D005096 1.3e-78 297.4 193 77.2
Nitab4.5_0001358g0020 Nicotiana tabacum HOM05D003935 ORTHO05D005096 5.6e-77 292.0 178 78.1
Dinv06578 Davidia involucrata HOM05D003935 ORTHO05D005096 9.6e-77 291.2 174 80.5
Cre02.g102350 Chlamydomonas reinhardtii HOM05D003935 ORTHO05D005096 2.4e-75 286.6 313 49.5
MCO14G260 Micromonas commoda HOM05D003935 ORTHO05D005096 8.4e-73 278.1 312 48.1
AagrBONN_evm.TU.Sc2ySwM_369.216 Anthoceros agrestis HOM05D003935 ORTHO05D005096 3.9e-70 269.2 273 54.6
arahy.Tifrunner.gnm1.ann1.VY970J Arachis hypogaea HOM05D003935 ORTHO05D005096 8.7e-70 268.1 164 79.3
Nn051s41922 Nelumbo nucifera HOM05D003935 ORTHO05D005096 5.8e-66 255.4 152 80.3
Nn1g09078 Nelumbo nucifera HOM05D003935 ORTHO05D005096 5.8e-66 255.4 152 80.3
SEGI_20183 Sequoiadendron giganteum HOM05D003935 ORTHO05D005096 3.3e-61 239.6 190 61.6
CsaV3_4G004080 Cucumis sativus L. HOM05D003935 ORTHO05D044846 1.4e-59 234.2 278 49.6
arahy.Tifrunner.gnm1.ann1.XHAQ77 Arachis hypogaea HOM05D003935 ORTHO05D005096 1.8e-59 233.8 185 67.6
PRCOL_00004022 Prasinoderma coloniale HOM05D003935 ORTHO05D005096 4.1e-59 232.6 303 42.9
Nitab4.5_0001358g0040 Nicotiana tabacum HOM05D003935 ORTHO05D001473 3.4e-58 229.6 112 96.4
Haze_27326 Corylus avellana HOM05D003935 ORTHO05D005096 1.2e-55 221.1 314 39.8
Os10g0560450 Oryza sativa ssp. japonica HOM05D003935 ORTHO05D005096 1.5e-50 204.1 186 58.1
MELO3C032833.2 Cucumis melo HOM05D003935 ORTHO05D044846 1.6e-47 194.1 302 43.7
Rhsim01G0073400 Rhododendron simsii HOM05D003935 ORTHO05D005096 3.3e-45 186.4 150 66.0
SEGI_13739 Sequoiadendron giganteum HOM05D003935 ORTHO05D005096 4.8e-44 182.6 103 83.5
Rhsim06G0236800 Rhododendron simsii HOM05D003935 ORTHO05D005096 8.2e-44 181.8 143 65.7
Zm00001eb363440 Zea mays HOM05D003935 ORTHO05D005096 1.1e-43 181.4 113 73.5
Zm00001eb003720 Zea mays HOM05D003935 ORTHO05D005096 4.1e-43 179.5 113 72.6
Zm00001eb078430 Zea mays HOM05D003935 ORTHO05D005096 4.1e-43 179.5 113 72.6
Zm00001eb216570 Zea mays HOM05D003935 ORTHO05D005096 5.3e-43 179.1 131 66.4
BcaB05g21605 Brassica carinata HOM05D003935 ORTHO05D005096 1.5e-42 177.6 134 66.4
Rhsim11G0131000 Rhododendron simsii HOM05D003935 ORTHO05D005096 2.5e-40 170.2 180 54.4
AL7G47000 Arabidopsis lyrata HOM05D003935 ORTHO05D003430 4.2e-40 169.5 171 55.6
Lj2A404G32 Lonicera japonica HOM05D000092 ORTHO05D000042 4.1e-35 152.9 278 33.5
Rhsim06G0096100 Rhododendron simsii HOM05D003935 ORTHO05D005096 8.5e-33 145.2 117 65.8
BcaB01g00746 Brassica carinata HOM05D003935 ORTHO05D005096 1.0e-30 138.3 108 64.8
BcaC04g19029 Brassica carinata HOM05D003935 ORTHO05D005096 2.6e-29 133.7 113 63.7
SEGI_32586 Sequoiadendron giganteum HOM05D003935 ORTHO05D005096 4.5e-26 122.9 68 82.4
A09p20840 Brassica napus HOM05D000772 ORTHO05D003239 9.4e-24 115.2 80 72.5
BraA09t37687Z Brassica rapa HOM05D000772 ORTHO05D003239 9.4e-24 115.2 80 72.5
MD07G1099000 Malus domestica HOM05D003935 ORTHO05D005096 1.7e-20 104.4 60 78.3
CBR_g28077 Chara braunii HOM05D003935 ORTHO05D005096 4.8e-20 102.8 72 63.9
Lj9A23G20 Lonicera japonica HOM05D000092 ORTHO05D000042 1.6e-18 97.8 117 44.4
Actinidia10778 Actinidia chinensis HOM05D003935 ORTHO05D005096 2.9e-17 93.6 91 59.3
arahy.Tifrunner.gnm1.ann1.W2J7UU Arachis hypogaea HOM05D003935 ORTHO05D023770 6.5e-17 92.4 53 83.0
C03p26610 Brassica napus HOM05D003935 ORTHO05D023770 8.5e-17 92.0 53 83.0
SalBow2G0135 Salvia bowleyana HOM05D003935 ORTHO05D357983 3.2e-16 90.1 47 87.2
Zm00001eb269920 Zea mays HOM05D001580 ORTHO05D001517 5.5e-16 89.4 52 82.7
Rhsim12G0075300 Rhododendron simsii HOM05D016728 ORTHO05D338590 2.1e-15 87.4 103 49.5
BcaC03g17887 Brassica carinata HOM05D003935 ORTHO05D005096 5.4e-11 72.8 42 78.6
Zm00001eb395010 Zea mays HOM05D034860 ORTHO05D442630 8.0e-07 58.9 37 64.9
Atru.chr2.3021 Acer truncatum HOM05D003935 ORTHO05D052568 1.8e-06 57.8 51 58.8
BcaC02g10492 Brassica carinata HOM05D036142 ORTHO05D023770 5.2e-06 56.2 28 89.3
C04p28240 Brassica napus HOM05D036142 ORTHO05D023770 5.2e-06 56.2 28 89.3
BolC4t24369H Brassica oleracea HOM05D036142 ORTHO05D023770 5.2e-06 56.2 28 89.3
Zm00001eb363380 Zea mays HOM05D003935 ORTHO05D445556 6.8e-06 55.8 37 62.2


User provided reference genes

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