Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra01G0088400 Salix brachista HOM05D000135 ORTHO05D000203 5.8e-58 227.3 108 100.0
Duzib068G0067 Durio zibethinus HOM05D000135 ORTHO05D000203 4.4e-13 78.2 59 66.1
Duzib084G0754 Durio zibethinus HOM05D000135 ORTHO05D000203 9.7e-13 77.0 59 64.4
TAR629G0786 Trochodendron aralioides HOM05D000135 ORTHO05D000203 2.2e-12 75.9 62 59.7
Duzib133G1170 Durio zibethinus HOM05D000135 ORTHO05D000203 1.8e-11 72.8 63 61.9
COL.COLO4_23844 Corchorus olitorius HOM05D000135 ORTHO05D000203 3.1e-11 72.0 61 59.0
Gohir.A08G133500 Gossypium hirsutum HOM05D000135 ORTHO05D000203 3.1e-11 72.0 67 58.2
Gohir.D08G154700 Gossypium hirsutum HOM05D000135 ORTHO05D000203 3.1e-11 72.0 67 58.2
Potri.014G070700 Populus trichocarpa HOM05D000135 ORTHO05D000203 3.1e-11 72.0 60 60.0
Rhsim01G0162600 Rhododendron simsii HOM05D000135 ORTHO05D000203 3.1e-11 72.0 69 56.5
RcHm_v2.0_Chr1g0350741 Rosa chinensis HOM05D000135 ORTHO05D000203 3.1e-11 72.0 60 63.3
FAN03G2295 Fragaria x ananassa HOM05D000528 ORTHO05D000999 5.3e-11 71.2 63 60.3
Gorai.004G160800 Gossypium raimondii HOM05D000135 ORTHO05D000203 5.3e-11 71.2 67 58.2
FvH4_7g12030 Fragaria vesca HOM05D000135 ORTHO05D000203 7.0e-11 70.9 63 60.3
FAN06G3409 Fragaria x ananassa HOM05D000528 ORTHO05D000999 7.0e-11 70.9 63 60.3
FAN06G3597 Fragaria x ananassa HOM05D000528 ORTHO05D000999 7.0e-11 70.9 63 60.3
FAN10G0017 Fragaria x ananassa HOM05D000528 ORTHO05D000999 7.0e-11 70.9 63 60.3
FAN10G3426 Fragaria x ananassa HOM05D000528 ORTHO05D000999 7.0e-11 70.9 63 60.3
Atru.chr5.322 Acer truncatum HOM05D000135 ORTHO05D000203 1.2e-10 70.1 62 58.1
CSS0011314 Camellia sinensis var. sinensis HOM05D000135 ORTHO05D000203 1.6e-10 69.7 63 57.1
CSS0038900 Camellia sinensis var. sinensis HOM05D000135 ORTHO05D000203 1.6e-10 69.7 63 57.1
Duzib138G1079 Durio zibethinus HOM05D000135 ORTHO05D000203 1.6e-10 69.7 63 61.9
Ciclev10022392m.g Citrus clementina HOM05D000135 ORTHO05D000203 2.0e-10 69.3 60 56.7
Cc02_g36580 Coffea canephora HOM05D000135 ORTHO05D000203 2.0e-10 69.3 72 55.6
Eucgr.D02448 Eucalyptus grandis HOM05D000135 ORTHO05D000203 2.6e-10 68.9 55 61.8
CANSAT56G3781 Cannabis sativa HOM05D000135 ORTHO05D000203 3.5e-10 68.6 79 45.6
Hma1.2p1_0719F.1_g208500 Hydrangea macrophylla HOM05D000135 ORTHO05D000203 3.5e-10 68.6 66 56.1
Lj7P527T50 Lonicera japonica HOM05D000135 ORTHO05D000203 3.5e-10 68.6 57 59.6
vmacro21001 Vaccinium macrocarpon HOM05D000135 ORTHO05D000203 3.5e-10 68.6 73 53.4
Actinidia12266 Actinidia chinensis HOM05D000135 ORTHO05D000203 4.5e-10 68.2 57 56.1
COL.COLO4_12560 Corchorus olitorius HOM05D000135 ORTHO05D000203 7.7e-10 67.4 67 52.2
QL08p052108 Quercus lobata HOM05D000135 ORTHO05D000203 7.7e-10 67.4 63 58.7
Thecc.01G374900 Theobroma cacao HOM05D000135 ORTHO05D000203 1.0e-09 67.0 62 59.7
Actinidia31417 Actinidia chinensis HOM05D000135 ORTHO05D000203 1.3e-09 66.6 57 54.4
CDE04G3406 Ceratophyllum demersum HOM05D000135 ORTHO05D000203 1.3e-09 66.6 64 56.2
Nitab4.5_0000457g0360 Nicotiana tabacum HOM05D000135 ORTHO05D000203 1.3e-09 66.6 65 52.3
Nitab4.5_0002993g0050 Nicotiana tabacum HOM05D000135 ORTHO05D000203 2.2e-09 65.9 65 52.3
MD02G1202000 Malus domestica HOM05D000135 ORTHO05D000203 5.0e-09 64.7 71 53.5
TWI59G1314 Tripterygium wilfordii HOM05D000135 ORTHO05D000203 5.0e-09 64.7 60 56.7
Cpa.g.sc18.122 Carica papaya HOM05D000135 ORTHO05D000203 6.5e-09 64.3 63 54.0
Prupe.2G146900 Prunus persica HOM05D000135 ORTHO05D000203 6.5e-09 64.3 74 51.4
Medtr8g036075 Medicago truncatula HOM05D000135 ORTHO05D000203 8.5e-09 63.9 65 52.3
PSO782G1943 Papaver somniferum HOM05D000135 ORTHO05D000203 8.5e-09 63.9 60 53.3
Ca_07826_v3 Cicer arietinum L. HOM05D001447 ORTHO05D005923 1.1e-08 63.5 66 50.0
Cfa001707 Carpinus fangiana HOM05D000135 ORTHO05D000203 1.5e-08 63.2 60 55.0
ATR0810G171 Amborella trichopoda HOM05D000135 ORTHO05D000203 2.5e-08 62.4 58 55.2
Glyma.01G144300 Glycine max HOM05D000135 ORTHO05D000203 2.5e-08 62.4 72 51.4
Lalb_Chr07g0189701 Lupinus albus HOM05D000135 ORTHO05D000203 3.2e-08 62.0 64 51.6
Phvul.010G085100 Phaseolus vulgaris HOM05D000135 ORTHO05D000203 3.2e-08 62.0 70 50.0
Peaxi162Scf00021g00151 Petunia axillaris HOM05D000135 ORTHO05D000203 4.2e-08 61.6 65 47.7
VMungo0331G0947 Vigna mungo HOM05D000135 ORTHO05D000203 4.2e-08 61.6 67 50.7
HanXRQChr17g0562461 Helianthus annuus HOM05D000135 ORTHO05D000203 5.5e-08 61.2 64 53.1
Lj3g0027917 Lotus japonicus HOM05D000135 ORTHO05D000203 5.5e-08 61.2 66 50.0
Actinidia36629 Actinidia chinensis HOM05D000135 ORTHO05D000203 7.2e-08 60.8 58 56.9
Psat4g195360 Pisum sativum HOM05D000135 ORTHO05D000203 7.2e-08 60.8 65 53.8
ECA234G0564 Erigeron canadensis HOM05D000135 ORTHO05D000203 9.4e-08 60.5 64 48.4
TPR.G26934 Trifolium pratense HOM05D000135 ORTHO05D000203 1.6e-07 59.7 66 48.5
CSS0029226 Camellia sinensis var. sinensis HOM05D000135 ORTHO05D000203 2.1e-07 59.3 58 55.2
Glyma.03G022800 Glycine max HOM05D000135 ORTHO05D000203 2.1e-07 59.3 71 49.3
SMO361G0034 Selaginella moellendorffii HOM05D000135 ORTHO05D000203 2.1e-07 59.3 57 50.9
Sopen01g037210 Solanum pennellii HOM05D000135 ORTHO05D000203 2.1e-07 59.3 64 46.9
SGA_v2.0_scaffold139G35436 Striga asiatica HOM05D000135 ORTHO05D000203 2.7e-07 58.9 58 53.4
Aqoxy7G00595 Aquilegia oxysepala HOM05D000135 ORTHO05D000203 3.6e-07 58.5 63 49.2
HanXRQChr16g0521621 Helianthus annuus HOM05D000135 ORTHO05D000203 3.6e-07 58.5 66 47.0
Medtr7g075040 Medicago truncatula HOM05D000135 ORTHO05D000203 3.6e-07 58.5 66 47.0
MSTRG.13622 Avicennia marina HOM05D000135 ORTHO05D000203 4.7e-07 58.2 58 55.2
CsaV3_6G006120 Cucumis sativus L. HOM05D000135 ORTHO05D034966 4.7e-07 58.2 54 48.1
Glyma.18G221300 Glycine max HOM05D000135 ORTHO05D000203 6.1e-07 57.8 81 45.7
Lsat_1_v5_gn_4_38941 Lactuca sativa HOM05D000135 ORTHO05D000203 6.1e-07 57.8 70 44.3
Solyc01g005370.3 Solanum lycopersicum HOM05D000135 ORTHO05D000203 6.1e-07 57.8 58 53.4
PGSC0003DMG400012770 Solanum tuberosum HOM05D000135 ORTHO05D000203 6.1e-07 57.8 64 45.3
Nn1g01201 Nelumbo nucifera HOM05D000135 ORTHO05D000203 8.0e-07 57.4 49 61.2
Oeu058622.1 Olea europaea HOM05D000135 ORTHO05D000203 8.0e-07 57.4 56 48.2
MD07G1123300 Malus domestica HOM05D000135 ORTHO05D000203 1.0e-06 57.0 55 58.2
Psat3g115400 Pisum sativum HOM05D000135 ORTHO05D000203 1.0e-06 57.0 66 45.5
Psat6g046160 Pisum sativum HOM05D000135 ORTHO05D000203 1.0e-06 57.0 60 51.7
SMO117G0116 Selaginella moellendorffii HOM05D000135 ORTHO05D000203 1.0e-06 57.0 60 46.7
TPR.G21728 Trifolium pratense HOM05D000135 ORTHO05D000203 1.0e-06 57.0 64 51.6
vmacro23116 Vaccinium macrocarpon HOM05D000135 ORTHO05D000203 1.4e-06 56.6 58 53.4
EL10Ac1g00907 Beta vulgaris HOM05D000135 ORTHO05D000203 1.8e-06 56.2 85 42.4
Lj3P864T51 Lonicera japonica HOM05D000135 ORTHO05D000203 1.8e-06 56.2 61 52.5
Nitab4.5_0000922g0050 Nicotiana tabacum HOM05D000135 ORTHO05D000203 1.8e-06 56.2 58 51.7
Nitab4.5_0024537g0010 Nicotiana tabacum HOM05D000135 ORTHO05D000203 1.8e-06 56.2 58 51.7
ECA233G3872 Erigeron canadensis HOM05D000017 ORTHO05D000013 2.3e-06 55.8 58 48.3
Sopen01g001390 Solanum pennellii HOM05D000135 ORTHO05D000203 2.3e-06 55.8 58 51.7
CAN.G388.1 Capsicum annuum HOM05D000135 ORTHO05D000203 3.0e-06 55.5 66 47.0
HanXRQChr12g0362661 Helianthus annuus HOM05D000135 ORTHO05D000203 3.0e-06 55.5 58 48.3
MBI13_g37863_MAGBIO Magnolia biondii HOM05D000135 ORTHO05D000203 3.0e-06 55.5 58 53.4
MSTRG.17201 Avicennia marina HOM05D000135 ORTHO05D000203 4.0e-06 55.1 63 46.0
MELO3C005272.2 Cucumis melo HOM05D000135 ORTHO05D000203 4.0e-06 55.1 58 46.6
HanXRQChr15g0476751 Helianthus annuus HOM05D000135 ORTHO05D000203 4.0e-06 55.1 58 48.3
Medtr5g008695 Medicago truncatula HOM05D000135 ORTHO05D000203 4.0e-06 55.1 57 47.4
TAR629G2506 Trochodendron aralioides HOM05D000135 ORTHO05D000203 4.0e-06 55.1 58 50.0
CsaV3_5G028160 Cucumis sativus L. HOM05D000135 ORTHO05D000203 5.2e-06 54.7 59 50.8
Lj6P738T35 Lonicera japonica HOM05D000135 ORTHO05D000203 5.2e-06 54.7 62 51.6
Lj2g0017494 Lotus japonicus HOM05D000135 ORTHO05D000203 6.7e-06 54.3 62 50.0
Pp3c13_2420 Physcomitrium patens HOM05D000135 ORTHO05D000203 6.7e-06 54.3 71 45.1
Pp3c6_1770 Physcomitrium patens HOM05D000135 ORTHO05D000203 6.7e-06 54.3 77 42.9
SalBow7G0899 Salvia bowleyana HOM05D000135 ORTHO05D000203 6.7e-06 54.3 55 52.7
Lalb_Chr01g0017141 Lupinus albus HOM05D000227 ORTHO05D000451 8.8e-06 53.9 67 41.8
Nn3g18356 Nelumbo nucifera HOM05D000135 ORTHO05D000203 8.8e-06 53.9 58 44.8


User provided reference genes

Program Settings