Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra01G0078400 Salix brachista HOM05D005411 ORTHO05D006463 3.4e-104 381.7 197 100.0
Potri.001G103800 Populus trichocarpa HOM05D005411 ORTHO05D006463 6.2e-58 228.0 137 89.8
Manes.02G019300 Manihot esculenta HOM05D005411 ORTHO05D006463 3.2e-38 162.5 155 59.4
TWI60G1258 Tripterygium wilfordii HOM05D005411 ORTHO05D006463 9.3e-38 161.0 128 65.6
CiPaw.11G134900 Carya illinoinensis HOM05D005411 ORTHO05D006463 6.7e-36 154.8 129 68.2
Sabra17G0003100 Salix brachista HOM05D005411 ORTHO05D006463 1.9e-35 153.3 88 92.0
Sabra17G0003800 Salix brachista HOM05D005411 ORTHO05D006463 1.9e-35 153.3 88 92.0
MD06G1084200 Malus domestica HOM05D005411 ORTHO05D006463 2.5e-35 152.9 132 65.2
FAN13G2772 Fragaria x ananassa HOM05D005411 ORTHO05D006463 3.3e-35 152.5 125 65.6
Ciclev10022634m.g Citrus clementina HOM05D005411 ORTHO05D006463 5.7e-35 151.8 135 63.0
Sabra18G0123000 Salix brachista HOM05D005411 ORTHO05D006463 7.4e-35 151.4 88 90.9
Gorai.003G158500 Gossypium raimondii HOM05D005411 ORTHO05D006463 1.3e-34 150.6 145 60.7
MD14G1105400 Malus domestica HOM05D005411 ORTHO05D006463 1.3e-34 150.6 132 65.2
PGR042G1580 Punica granatum HOM05D005411 ORTHO05D006463 1.3e-34 150.6 150 60.0
FAN04G3034 Fragaria x ananassa HOM05D005411 ORTHO05D006463 1.6e-34 150.2 125 64.0
Gohir.A03G016600 Gossypium hirsutum HOM05D005411 ORTHO05D006463 2.2e-34 149.8 146 61.6
Prupe.5G100600 Prunus persica HOM05D005411 ORTHO05D006463 2.2e-34 149.8 131 61.8
Sabra14G0123800 Salix brachista HOM05D005411 ORTHO05D006463 2.8e-34 149.4 88 89.8
Cfa012226 Carpinus fangiana HOM05D005411 ORTHO05D006463 3.7e-34 149.1 132 61.4
Potri.003G127900 Populus trichocarpa HOM05D005411 ORTHO05D006463 4.8e-34 148.7 144 59.0
RcHm_v2.0_Chr7g0197541 Rosa chinensis HOM05D005411 ORTHO05D006463 4.8e-34 148.7 140 58.6
FvH4_5g02510 Fragaria vesca HOM05D005411 ORTHO05D006463 2.4e-33 146.4 95 76.8
FAN08G0497 Fragaria x ananassa HOM05D005411 ORTHO05D006463 4.1e-33 145.6 126 64.3
Lalb_Chr09g0332851 Lupinus albus HOM05D005411 ORTHO05D006463 5.3e-33 145.2 108 68.5
Nn1g01526 Nelumbo nucifera HOM05D005411 ORTHO05D006463 5.3e-33 145.2 132 60.6
QL12p032900 Quercus lobata HOM05D005411 ORTHO05D006463 6.9e-33 144.8 135 60.7
FAN18G0348 Fragaria x ananassa HOM05D005411 ORTHO05D006463 9.0e-33 144.4 91 78.0
Phvul.002G289800 Phaseolus vulgaris HOM05D005411 ORTHO05D006463 1.2e-32 144.1 94 76.6
TAR374G0701 Trochodendron aralioides HOM05D005411 ORTHO05D006463 1.5e-32 143.7 126 58.7
Glyma.05G208200 Glycine max HOM05D005411 ORTHO05D006463 4.5e-32 142.1 90 78.9
Thecc.03G279100 Theobroma cacao HOM05D005411 ORTHO05D006463 4.5e-32 142.1 145 56.6
Peaxi162Scf00119g00941 Petunia axillaris HOM05D005411 ORTHO05D006463 5.9e-32 141.7 108 68.5
Nitab4.5_0013184g0010 Nicotiana tabacum HOM05D005411 ORTHO05D006463 7.7e-32 141.4 116 62.9
Eucgr.H02261 Eucalyptus grandis HOM05D005411 ORTHO05D006463 1.3e-31 140.6 132 60.6
CSS0034062 Camellia sinensis var. sinensis HOM05D005411 ORTHO05D006463 1.7e-31 140.2 96 75.0
Nitab4.5_0001615g0100 Nicotiana tabacum HOM05D005411 ORTHO05D006463 1.7e-31 140.2 116 62.1
Oeu011043.2 Olea europaea HOM05D005411 ORTHO05D006463 1.7e-31 140.2 102 71.6
Solyc08g081130.4 Solanum lycopersicum HOM05D005411 ORTHO05D006463 2.2e-31 139.8 109 67.0
Sopen08g029430 Solanum pennellii HOM05D005411 ORTHO05D006463 2.2e-31 139.8 109 67.0
PGSC0003DMG403012339 Solanum tuberosum HOM05D005411 ORTHO05D006463 2.2e-31 139.8 109 67.0
arahy.Tifrunner.gnm1.ann1.FJ1DNZ Arachis hypogaea HOM05D005411 ORTHO05D006463 3.8e-31 139.0 90 74.4
arahy.Tifrunner.gnm1.ann1.P2DUDW Arachis hypogaea HOM05D005411 ORTHO05D006463 3.8e-31 139.0 90 74.4
CANSAT78G0141 Cannabis sativa HOM05D005411 ORTHO05D006463 3.8e-31 139.0 155 53.5
Eucgr.L02732 Eucalyptus grandis HOM05D005411 ORTHO05D006463 3.8e-31 139.0 132 59.8
CAN.G774.50 Capsicum annuum HOM05D005411 ORTHO05D006463 1.9e-30 136.7 108 64.8
Dinv38942 Davidia involucrata HOM05D005411 ORTHO05D006463 1.9e-30 136.7 136 55.9
Ca_17530_v3 Cicer arietinum L. HOM05D005411 ORTHO05D006463 2.5e-30 136.3 106 64.2
VMungo0251G3187 Vigna mungo HOM05D005411 ORTHO05D006463 2.5e-30 136.3 90 74.4
CsaV3_4G005950 Cucumis sativus L. HOM05D005411 ORTHO05D006463 5.5e-30 135.2 137 55.5
vmacro13959 Vaccinium macrocarpon HOM05D005411 ORTHO05D006463 7.2e-30 134.8 139 54.0
Actinidia02004 Actinidia chinensis HOM05D005411 ORTHO05D006463 9.4e-30 134.4 138 55.1
Thhalv10026496m.g Eutrema salsugineum HOM05D005411 ORTHO05D006463 9.4e-30 134.4 103 66.0
MELO3C016353.2 Cucumis melo HOM05D005411 ORTHO05D006463 1.2e-29 134.0 134 56.7
Sed0017646 Sechium edule HOM05D005411 ORTHO05D006463 1.2e-29 134.0 109 64.2
GSVIVG01019751001 Vitis vinifera HOM05D005411 ORTHO05D006463 1.2e-29 134.0 129 58.9
ClCG07G008090 Citrullus lanatus HOM05D005411 ORTHO05D006463 1.6e-29 133.7 93 72.0
Hma1.2p1_0377F.1_g139300 Hydrangea macrophylla HOM05D005411 ORTHO05D006463 1.6e-29 133.7 103 67.0
Lj4g0004308 Lotus japonicus HOM05D005411 ORTHO05D006463 1.6e-29 133.7 109 64.2
THA.LOC104814574 Tarenaya hassleriana HOM05D005411 ORTHO05D006463 1.6e-29 133.7 140 56.4
Aqoxy7G00317 Aquilegia oxysepala HOM05D005411 ORTHO05D006463 3.6e-29 132.5 90 72.2
Cc08_g14780 Coffea canephora HOM05D005411 ORTHO05D006463 3.6e-29 132.5 162 48.1
AUR62022799 Chenopodium quinoa HOM05D005411 ORTHO05D006463 4.6e-29 132.1 105 61.0
PSO782G3895 Papaver somniferum HOM05D005411 ORTHO05D006463 4.6e-29 132.1 106 64.2
Migut.A00759 Erythranthe guttata HOM05D005411 ORTHO05D006463 6.1e-29 131.7 113 62.8
Medtr8g098255 Medicago truncatula HOM05D005411 ORTHO05D006463 6.1e-29 131.7 138 52.9
PSO478G4730 Papaver somniferum HOM05D005411 ORTHO05D006463 6.1e-29 131.7 106 64.2
Psat7g033000 Pisum sativum HOM05D005411 ORTHO05D006463 6.1e-29 131.7 107 60.7
AL7G30140 Arabidopsis lyrata HOM05D005411 ORTHO05D006463 7.9e-29 131.3 106 65.1
AT4G23330 Arabidopsis thaliana HOM05D005411 ORTHO05D006463 7.9e-29 131.3 106 65.1
SGA_v2.0_scaffold173G39183 Striga asiatica HOM05D005411 ORTHO05D006463 1.4e-28 130.6 133 54.1
Dinv38939 Davidia involucrata HOM05D005411 ORTHO05D006463 1.8e-28 130.2 151 50.3
ECA233G5385 Erigeron canadensis HOM05D005411 ORTHO05D006463 1.8e-28 130.2 96 67.7
MBI18_g42863_MAGBIO Magnolia biondii HOM05D005411 ORTHO05D006463 1.8e-28 130.2 91 71.4
Sabra11G0012500 Salix brachista HOM05D005411 ORTHO05D006463 1.8e-28 130.2 79 88.6
Rhsim07G0090400 Rhododendron simsii HOM05D005411 ORTHO05D006463 2.3e-28 129.8 122 55.7
Actinidia14564 Actinidia chinensis HOM05D005411 ORTHO05D006463 3.0e-28 129.4 109 63.3
Sabra05G0164800 Salix brachista HOM05D005411 ORTHO05D006463 3.0e-28 129.4 110 71.8
Hund16039 Selenicereus undatus HOM05D005411 ORTHO05D006463 3.0e-28 129.4 114 57.9
Carub.0007s1784 Capsella rubella HOM05D005411 ORTHO05D006463 3.9e-28 129.0 106 64.2
HanXRQChr13g0394241 Helianthus annuus HOM05D005411 ORTHO05D006463 3.9e-28 129.0 130 50.8
Lsat_1_v5_gn_6_6580 Lactuca sativa HOM05D005411 ORTHO05D006463 3.9e-28 129.0 95 68.4
Sabra17G0034500 Salix brachista HOM05D005411 ORTHO05D006463 3.9e-28 129.0 82 85.4
vmacro11335 Vaccinium macrocarpon HOM05D005411 ORTHO05D006463 3.9e-28 129.0 133 51.9
vmacro22820 Vaccinium macrocarpon HOM05D005411 ORTHO05D006463 3.9e-28 129.0 133 51.9
BcaC09g51012 Brassica carinata HOM05D005411 ORTHO05D006463 6.7e-28 128.3 102 65.7
BolC1t01733H Brassica oleracea HOM05D005411 ORTHO05D006463 6.7e-28 128.3 102 65.7
SalBow4G3209 Salvia bowleyana HOM05D005411 ORTHO05D006463 8.8e-28 127.9 104 64.4
TPR.G12871 Trifolium pratense HOM05D005411 ORTHO05D006463 1.5e-27 127.1 104 61.5
ATR0680G335 Amborella trichopoda HOM05D005411 ORTHO05D006463 2.0e-27 126.7 104 63.5
Aa31LG9G10800 Aethionema arabicum HOM05D005411 ORTHO05D006463 2.5e-27 126.3 124 57.3
A01p14570 Brassica napus HOM05D005411 ORTHO05D006463 3.3e-27 125.9 137 54.0
BraA01t01399Z Brassica rapa HOM05D005411 ORTHO05D006463 3.3e-27 125.9 137 54.0
BraA03t14482Z Brassica rapa HOM05D000022 ORTHO05D000071 3.3e-27 125.9 118 56.8
Gohir.D03G151300 Gossypium hirsutum HOM05D005411 ORTHO05D006463 4.3e-27 125.6 126 58.7
BcaC03g18356 Brassica carinata HOM05D005411 ORTHO05D006463 9.7e-27 124.4 107 63.6
BcaNung01456 Brassica carinata HOM05D005411 ORTHO05D006463 9.7e-27 124.4 137 52.6
C02p64340 Brassica napus HOM05D005411 ORTHO05D006463 9.7e-27 124.4 107 63.6
BolC7t45755H Brassica oleracea HOM05D005411 ORTHO05D006463 9.7e-27 124.4 137 52.6
C07p52580 Brassica napus HOM05D000022 ORTHO05D000071 1.3e-26 124.0 137 52.6
CARHR230670 Cardamine hirsuta HOM05D005411 ORTHO05D006463 2.8e-26 122.9 96 63.5
A03p54210 Brassica napus HOM05D005411 ORTHO05D006463 3.7e-26 122.5 102 62.7
unitig_46.g18551 Utricularia gibba HOM05D005411 ORTHO05D006463 3.7e-26 122.5 107 59.8
CDE11G0686 Ceratophyllum demersum HOM05D003133 ORTHO05D006463 4.8e-26 122.1 131 54.2
BcaNung03266 Brassica carinata HOM05D005411 ORTHO05D006463 6.3e-26 121.7 94 64.9
CiPaw.12G092800 Carya illinoinensis HOM05D005411 ORTHO05D006463 6.3e-26 121.7 128 56.2
MSTRG.25610 Avicennia marina HOM05D005411 ORTHO05D006463 8.2e-26 121.3 115 54.8
AUR62012163 Chenopodium quinoa HOM05D005411 ORTHO05D006463 3.8e-23 112.5 144 45.1
SEGI_09083 Sequoiadendron giganteum HOM05D005411 ORTHO05D006463 6.5e-23 111.7 106 50.9
EL10Ac2g04672 Beta vulgaris HOM05D005411 ORTHO05D006463 8.5e-23 111.3 110 50.0
C01p18020 Brassica napus HOM05D005411 ORTHO05D006463 1.4e-22 110.5 83 68.7
Lj8E221T1 Lonicera japonica HOM05D005411 ORTHO05D006463 4.2e-22 109.0 85 63.5
Zm00001eb104990 Zea mays HOM05D005411 ORTHO05D006463 9.4e-22 107.8 83 62.7
Os07g0483400 Oryza sativa ssp. japonica HOM05D005411 ORTHO05D006463 1.2e-21 107.5 112 50.0
Sc01g0009600 Simmondsia chinensis HOM05D005411 ORTHO05D006463 3.6e-21 105.9 78 64.1
Pp3c11_2200 Physcomitrium patens HOM05D005411 ORTHO05D006463 7.9e-21 104.8 146 41.1
Duzib205G1808 Durio zibethinus HOM05D005411 ORTHO05D006463 8.8e-20 101.3 141 46.1
CDE09G0994 Ceratophyllum demersum HOM05D005411 ORTHO05D006463 2.0e-19 100.1 123 49.6
Atru.chr9.2185 Acer truncatum HOM05D005411 ORTHO05D006463 3.1e-17 92.8 97 51.5
Oeu047371.1 Olea europaea HOM05D005411 ORTHO05D006463 3.5e-16 89.4 66 66.7
BcaNung00981 Brassica carinata HOM05D005411 ORTHO05D006463 5.9e-16 88.6 110 49.1
CSS0044618 Camellia sinensis var. sinensis HOM05D005411 ORTHO05D006463 5.9e-16 88.6 61 73.8
SHI07138 Sapria himalayana HOM05D005411 ORTHO05D006463 5.9e-16 88.6 81 58.0
BolC5t34770H Brassica oleracea HOM05D005411 ORTHO05D006463 1.3e-15 87.4 76 57.9
Duzib084G0828 Durio zibethinus HOM05D005411 ORTHO05D006463 1.7e-15 87.0 59 69.5
Mapoly0008s0209 Marchantia polymorpha HOM05D005411 ORTHO05D006463 2.9e-15 86.3 110 40.0
Hma1.2p1_0377F.1_g139290 Hydrangea macrophylla HOM05D005411 ORTHO05D006463 8.5e-15 84.7 66 68.2
AagrBONN_evm.TU.Sc2ySwM_369.479 Anthoceros agrestis HOM05D005411 ORTHO05D006463 1.1e-14 84.3 103 43.7
BcaNung00977 Brassica carinata HOM05D005411 ORTHO05D006463 2.0e-11 73.6 50 66.0
BcaC01g04135 Brassica carinata HOM05D005411 ORTHO05D006463 5.7e-11 72.0 56 62.5
SMO329G0027 Selaginella moellendorffii HOM05D005411 ORTHO05D006463 5.7e-11 72.0 67 49.3
SMO358G0504 Selaginella moellendorffii HOM05D005411 ORTHO05D006463 5.7e-11 72.0 67 49.3
BcaB05g22557 Brassica carinata HOM05D002513 ORTHO05D002720 5.3e-09 65.5 58 63.8
HPP92_001497 Vanilla planifolia HOM05D005411 ORTHO05D006463 1.2e-08 64.3 46 65.2
COL.COLO4_34468 Corchorus olitorius HOM05D005411 ORTHO05D006463 8.5e-07 58.2 82 42.7
C03p44770 Brassica napus HOM05D005411 ORTHO05D006463 3.2e-06 56.2 31 77.4
BolC3t16740H Brassica oleracea HOM05D005411 ORTHO05D006463 3.2e-06 56.2 31 77.4
Eucgr.H02258 Eucalyptus grandis HOM05D005411 ORTHO05D006463 4.2e-06 55.8 74 48.6
Hund13808 Selenicereus undatus HOM05D005411 ORTHO05D006463 9.4e-06 54.7 48 58.3


User provided reference genes

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