Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra01G0077700 Salix brachista HOM05D008361 ORTHO05D010527 6.2e-93 344.4 204 100.0
Potri.001G102600 Populus trichocarpa HOM05D008361 ORTHO05D010527 4.3e-78 295.0 204 88.7
Manes.02G025400 Manihot esculenta HOM05D008361 ORTHO05D010527 9.6e-54 214.2 204 60.8
Dinv38990 Davidia involucrata HOM05D008361 ORTHO05D010527 1.1e-52 210.7 205 60.0
Thecc.03G273500 Theobroma cacao HOM05D008361 ORTHO05D010527 3.4e-51 205.7 199 60.3
Ciclev10024020m.g Citrus clementina HOM05D008361 ORTHO05D010527 1.3e-50 203.8 214 57.5
QL12p017696 Quercus lobata HOM05D008361 ORTHO05D010527 6.5e-50 201.4 203 55.2
Rhsim07G0093200 Rhododendron simsii HOM05D008361 ORTHO05D010527 9.3e-49 197.6 206 58.3
TWI81G0130 Tripterygium wilfordii HOM05D008361 ORTHO05D010527 1.6e-48 196.8 205 55.1
Duzib084G0204 Durio zibethinus HOM05D008361 ORTHO05D010527 1.5e-46 190.3 205 56.1
vmacro13932 Vaccinium macrocarpon HOM05D008361 ORTHO05D010527 1.9e-46 189.9 205 55.6
PGR031G0074 Punica granatum HOM05D008361 ORTHO05D010527 1.3e-45 187.2 189 59.3
Gohir.D12G228400 Gossypium hirsutum HOM05D008361 ORTHO05D010527 2.0e-43 179.9 191 60.2
Atru.chr9.1564 Acer truncatum HOM05D008361 ORTHO05D010527 4.5e-43 178.7 189 56.6
Gohir.A12G225900 Gossypium hirsutum HOM05D008361 ORTHO05D010527 1.3e-42 177.2 191 59.7
Sopen08g028880 Solanum pennellii HOM05D008361 ORTHO05D010527 3.8e-42 175.6 209 54.1
Hma1.2p1_0514F.1_g169930 Hydrangea macrophylla HOM05D008361 ORTHO05D010527 5.0e-42 175.3 155 62.6
Peaxi162Scf00714g00330 Petunia axillaris HOM05D008361 ORTHO05D010527 1.1e-41 174.1 225 48.4
Gorai.004G209100 Gossypium raimondii HOM05D008361 ORTHO05D010527 1.4e-41 173.7 207 51.7
TAR629G3045 Trochodendron aralioides HOM05D008361 ORTHO05D010527 1.4e-41 173.7 164 60.4
Oeu029779.2 Olea europaea HOM05D008361 ORTHO05D010527 3.6e-40 169.1 165 58.8
CANSAT21G0386 Cannabis sativa HOM05D008361 ORTHO05D010527 6.1e-40 168.3 205 50.7
Cpa.g.sc74.67 Carica papaya HOM05D008361 ORTHO05D010527 5.7e-38 161.8 149 59.7
THA.LOC104806378 Tarenaya hassleriana HOM05D008361 ORTHO05D010527 9.7e-38 161.0 217 47.9
GSVIVG01019832001 Vitis vinifera HOM05D008361 ORTHO05D010527 1.6e-37 160.2 224 50.4
Migut.A00801 Erythranthe guttata HOM05D008361 ORTHO05D010527 8.2e-37 157.9 159 55.3
PSO478G1996 Papaver somniferum HOM05D008361 ORTHO05D010527 7.7e-35 151.4 158 51.3
Thhalv10028959m.g Eutrema salsugineum HOM05D008361 ORTHO05D010527 2.9e-34 149.4 168 54.8
PSO782G5127 Papaver somniferum HOM05D008361 ORTHO05D010527 5.0e-34 148.7 158 50.6
Lsat_1_v5_gn_3_8380 Lactuca sativa HOM05D008361 ORTHO05D010527 1.2e-32 144.1 203 47.8
Nn1g01412 Nelumbo nucifera HOM05D008361 ORTHO05D010527 3.6e-32 142.5 204 47.5
BcaB01g01669 Brassica carinata HOM05D008361 ORTHO05D010527 1.8e-31 140.2 168 50.6
Sp6g05820 Schrenkiella parvula HOM05D008361 ORTHO05D010527 2.3e-31 139.8 163 51.5
AL6G46250 Arabidopsis lyrata HOM05D008361 ORTHO05D010527 3.9e-31 139.0 210 45.7
AT4G11655 Arabidopsis thaliana HOM05D008361 ORTHO05D010527 5.1e-31 138.7 210 44.8
CARHR254730 Cardamine hirsuta HOM05D008361 ORTHO05D010527 6.7e-31 138.3 164 49.4
A09p27520 Brassica napus HOM05D008361 ORTHO05D010527 1.5e-30 137.1 169 49.7
BraA09t38320Z Brassica rapa HOM05D008361 ORTHO05D010527 1.5e-30 137.1 169 49.7
Gohir.A08G179550 Gossypium hirsutum HOM05D008361 ORTHO05D010527 1.5e-30 137.1 196 47.4
C09p34810 Brassica napus HOM05D008361 ORTHO05D010527 2.0e-30 136.7 168 50.0
BolC9t56327H Brassica oleracea HOM05D008361 ORTHO05D010527 2.0e-30 136.7 168 50.0
Eucgr.D01907 Eucalyptus grandis HOM05D008361 ORTHO05D010527 7.4e-30 134.8 163 50.3
Carub.0006s3074 Capsella rubella HOM05D008361 ORTHO05D010527 3.7e-29 132.5 214 42.1
HanXRQChr05g0132741 Helianthus annuus HOM05D008361 ORTHO05D010527 1.4e-28 130.6 206 41.7
Actinidia27400 Actinidia chinensis HOM05D008361 ORTHO05D010527 5.3e-28 128.6 146 54.8
Gohir.D08G198300 Gossypium hirsutum HOM05D008361 ORTHO05D010527 2.0e-27 126.7 207 44.0
Gorai.008G244500 Gossypium raimondii HOM05D008361 ORTHO05D010527 1.3e-26 124.0 144 59.7
Nitab4.5_0010472g0040 Nicotiana tabacum HOM05D008361 ORTHO05D010527 2.2e-26 123.2 102 67.6
CDE11G0059 Ceratophyllum demersum HOM05D008361 ORTHO05D010527 3.6e-24 115.9 164 44.5
MBI16_g06253_MAGBIO Magnolia biondii HOM05D008361 ORTHO05D010527 7.0e-20 101.7 110 50.0
ECA236G4060 Erigeron canadensis HOM05D008361 ORTHO05D010527 9.1e-20 101.3 131 48.9
CDE04G2251 Ceratophyllum demersum HOM05D008361 ORTHO05D010527 2.9e-18 96.3 149 40.3
SalBow1G8630 Salvia bowleyana HOM05D008361 ORTHO05D010527 3.2e-17 92.8 163 38.7
ATR0317G124 Amborella trichopoda HOM05D008361 ORTHO05D010527 2.2e-13 80.1 174 40.2
SEGI_30233 Sequoiadendron giganteum HOM05D001228 ORTHO05D003869 3.5e-11 72.8 165 33.9
CsaV3_1G001550 Cucumis sativus L. HOM05D001228 ORTHO05D002377 2.2e-10 70.1 126 33.3
ClCG06G016960 Citrullus lanatus HOM05D001228 ORTHO05D002377 5.0e-10 68.9 126 33.3
MELO3C017095.2 Cucumis melo HOM05D001228 ORTHO05D002377 5.0e-10 68.9 126 33.3
SEGI_01255 Sequoiadendron giganteum HOM05D001228 ORTHO05D003869 6.5e-10 68.6 151 36.4
COL.COLO4_34416 Corchorus olitorius HOM05D008361 ORTHO05D010527 4.2e-09 65.9 99 60.6
PSO063G0161 Papaver somniferum HOM05D001228 ORTHO05D002377 7.2e-09 65.1 146 33.6
PSO832G4192 Papaver somniferum HOM05D001228 ORTHO05D002377 8.0e-08 61.6 146 32.2
SEGI_06720 Sequoiadendron giganteum HOM05D001228 ORTHO05D002377 1.8e-07 60.5 160 31.9
CDE06G1654 Ceratophyllum demersum HOM05D001228 ORTHO05D002377 2.3e-07 60.1 146 32.2
Prupe.5G174700 Prunus persica HOM05D001228 ORTHO05D002377 3.0e-07 59.7 160 30.0
Migut.I00019 Erythranthe guttata HOM05D001228 ORTHO05D002377 4.0e-07 59.3 147 34.0
Sc04g0001840 Simmondsia chinensis HOM05D001228 ORTHO05D002377 4.0e-07 59.3 126 31.7
ATR0730G035 Amborella trichopoda HOM05D001228 ORTHO05D002377 5.2e-07 58.9 144 34.0
RcHm_v2.0_Chr2g0171451 Rosa chinensis HOM05D001228 ORTHO05D002377 5.2e-07 58.9 145 32.4
SalBow1G6599 Salvia bowleyana HOM05D008361 ORTHO05D010527 5.2e-07 58.9 62 53.2
SalBow5G1632 Salvia bowleyana HOM05D001228 ORTHO05D002377 6.8e-07 58.5 149 33.6
SalBow5G2380 Salvia bowleyana HOM05D001228 ORTHO05D002377 6.8e-07 58.5 149 33.6
Cpa.g.sc39.87 Carica papaya HOM05D001228 ORTHO05D002377 8.8e-07 58.2 147 33.3
CiPaw.11G027300 Carya illinoinensis HOM05D001228 ORTHO05D002377 8.8e-07 58.2 145 32.4
Nn4g22785 Nelumbo nucifera HOM05D001228 ORTHO05D002377 1.2e-06 57.8 146 32.2
ECA246G2365 Erigeron canadensis HOM05D001228 ORTHO05D002377 1.5e-06 57.4 143 32.9
Gohir.D07G226600 Gossypium hirsutum HOM05D001228 ORTHO05D002377 2.0e-06 57.0 141 31.9
Phvul.003G199800 Phaseolus vulgaris HOM05D001228 ORTHO05D002377 2.6e-06 56.6 145 31.7
Aqoxy3G02962 Aquilegia oxysepala HOM05D001228 ORTHO05D002377 3.4e-06 56.2 143 32.2
DCAR_028890 Daucus carota HOM05D001228 ORTHO05D003869 3.4e-06 56.2 154 28.6
DCAR_028892 Daucus carota HOM05D001228 ORTHO05D003869 3.4e-06 56.2 154 28.6
Glyma.05G037100 Glycine max HOM05D001228 ORTHO05D002377 3.4e-06 56.2 145 31.7
Gorai.001G261500 Gossypium raimondii HOM05D001228 ORTHO05D002377 3.4e-06 56.2 141 31.9
Sp4g18580 Schrenkiella parvula HOM05D001228 ORTHO05D002377 3.4e-06 56.2 145 33.8
TPR.G1678 Trifolium pratense HOM05D001228 ORTHO05D002377 3.4e-06 56.2 143 32.2
CANSAT64G1579 Cannabis sativa HOM05D001228 ORTHO05D002377 4.4e-06 55.8 146 31.5
CsaV3_5G037240 Cucumis sativus L. HOM05D001228 ORTHO05D002377 4.4e-06 55.8 145 30.3
Duzib147G0423 Durio zibethinus HOM05D001228 ORTHO05D002377 4.4e-06 55.8 191 29.3
Solyc03g114290.4 Solanum lycopersicum HOM05D001228 ORTHO05D002377 4.4e-06 55.8 143 32.9
Sopen03g033390 Solanum pennellii HOM05D001228 ORTHO05D002377 4.4e-06 55.8 143 32.9
VMungo1215G0222 Vigna mungo HOM05D001228 ORTHO05D002377 4.4e-06 55.8 145 31.7
Zm00001eb231550 Zea mays HOM05D001228 ORTHO05D002377 4.4e-06 55.8 135 34.1
Atru.chr6.2300 Acer truncatum HOM05D001228 ORTHO05D002377 5.7e-06 55.5 143 34.3
Manes.17G121200 Manihot esculenta HOM05D001228 ORTHO05D002377 5.7e-06 55.5 143 30.8
Oeu016371.1 Olea europaea HOM05D001228 ORTHO05D002377 5.7e-06 55.5 147 33.3
Ciclev10021392m.g Citrus clementina HOM05D001228 ORTHO05D002377 7.5e-06 55.1 145 31.0
GSVIVG01007763001 Vitis vinifera HOM05D001228 ORTHO05D002377 7.5e-06 55.1 126 30.2
BcaB02g09360 Brassica carinata HOM05D001228 ORTHO05D002377 9.8e-06 54.7 148 31.8
RcHm_v2.0_Chr7g0193681 Rosa chinensis HOM05D001228 ORTHO05D002377 9.8e-06 54.7 159 30.2
TPR.G37561 Trifolium pratense HOM05D001228 ORTHO05D002377 9.8e-06 54.7 143 30.8
unitig_744.g24401 Utricularia gibba HOM05D001228 ORTHO05D002377 9.8e-06 54.7 145 32.4


User provided reference genes

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