Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra01G0073800 Salix brachista HOM05D006267 ORTHO05D007490 0.0e+00 1464.1 746 100.0
Potri.001G098500 Populus trichocarpa HOM05D006267 ORTHO05D007490 1.3e-310 1069.3 714 81.8
Potri.003G133100 Populus trichocarpa HOM05D006267 ORTHO05D007490 1.1e-259 900.2 724 70.2
Sabra03G0095400 Salix brachista HOM05D006267 ORTHO05D007490 1.1e-229 800.4 726 63.6
Manes.01G056900 Manihot esculenta HOM05D006267 ORTHO05D007490 1.6e-159 567.4 660 51.1
Manes.02G016400 Manihot esculenta HOM05D006267 ORTHO05D007490 1.1e-147 528.1 537 56.1
GSVIVG01019426001 Vitis vinifera HOM05D006267 ORTHO05D007490 5.5e-147 525.8 670 47.6
Thecc.03G287200 Theobroma cacao HOM05D006267 ORTHO05D007490 1.0e-140 505.0 654 46.9
COL.COLO4_08352 Corchorus olitorius HOM05D006267 ORTHO05D007490 3.2e-139 500.0 647 47.1
Atru.chr9.2105 Acer truncatum HOM05D006267 ORTHO05D007490 5.5e-131 472.6 663 46.6
Cfa012253 Carpinus fangiana HOM05D006267 ORTHO05D007490 1.8e-129 467.6 683 45.8
QL02p033236 Quercus lobata HOM05D006267 ORTHO05D007490 1.8e-129 467.6 643 45.9
Dinv38895 Davidia involucrata HOM05D006267 ORTHO05D007490 8.2e-127 458.8 619 45.9
Duzib084G0031 Durio zibethinus HOM05D006267 ORTHO05D007490 2.2e-124 450.7 658 44.7
Dinv37589 Davidia involucrata HOM05D006267 ORTHO05D007490 3.8e-124 449.9 677 44.5
Ciclev10019222m.g Citrus clementina HOM05D006267 ORTHO05D007490 1.9e-123 447.6 707 44.1
Prupe.5G107200 Prunus persica HOM05D006267 ORTHO05D007490 1.2e-117 428.3 575 47.5
MD14G1113000 Malus domestica HOM05D006267 ORTHO05D007490 1.6e-114 417.9 679 43.3
MD06G1092500 Malus domestica HOM05D006267 ORTHO05D007490 2.6e-112 410.6 675 42.7
CiPaw.12G088700 Carya illinoinensis HOM05D006267 ORTHO05D007490 1.8e-110 404.4 577 45.9
Duzib205G1874 Durio zibethinus HOM05D006267 ORTHO05D007490 2.4e-110 404.1 647 41.0
Gorai.007G024600 Gossypium raimondii HOM05D006267 ORTHO05D007490 2.0e-109 401.0 607 44.5
Gohir.A11G023100 Gossypium hirsutum HOM05D006267 ORTHO05D007490 7.7e-109 399.1 612 43.8
RcHm_v2.0_Chr7g0196491 Rosa chinensis HOM05D006267 ORTHO05D007490 1.3e-108 398.3 679 40.9
VMungo0251G1048 Vigna mungo HOM05D006267 ORTHO05D007490 1.7e-108 397.9 593 43.3
Glyma.08G018700 Glycine max HOM05D006267 ORTHO05D007490 1.1e-107 395.2 636 41.8
ClCG07G007820 Citrullus lanatus HOM05D006267 ORTHO05D007490 2.5e-107 394.0 586 43.7
Gohir.D11G022800 Gossypium hirsutum HOM05D006267 ORTHO05D007490 5.5e-107 392.9 612 43.5
CANSAT21G1484 Cannabis sativa HOM05D006267 ORTHO05D007490 1.2e-106 391.7 606 44.6
TAR629G1352 Trochodendron aralioides HOM05D006267 ORTHO05D007490 3.6e-106 390.2 647 40.5
FvH4_5g03290 Fragaria vesca HOM05D006267 ORTHO05D007490 2.3e-105 387.5 641 41.7
Ca_10954_v3 Cicer arietinum L. HOM05D006267 ORTHO05D007490 2.0e-104 384.4 636 41.8
Cpa.g.sc201.8 Carica papaya HOM05D006267 ORTHO05D007490 5.7e-104 382.9 727 39.1
Phvul.002G293500 Phaseolus vulgaris HOM05D006267 ORTHO05D007490 7.5e-104 382.5 634 41.2
Sed0011828 Sechium edule HOM05D006267 ORTHO05D007490 1.7e-103 381.3 590 42.4
FAN18G3550 Fragaria x ananassa HOM05D006267 ORTHO05D007490 2.8e-103 380.6 639 41.3
Glyma.05G212200 Glycine max HOM05D006267 ORTHO05D007490 2.8e-103 380.6 587 43.3
FAN04G2714 Fragaria x ananassa HOM05D006267 ORTHO05D007490 1.8e-102 377.9 602 42.5
CSS0029775 Camellia sinensis var. sinensis HOM05D006267 ORTHO05D007490 2.4e-102 377.5 666 38.1
Lj4g0011337 Lotus japonicus HOM05D006267 ORTHO05D007490 2.4e-102 377.5 601 41.8
CsaV3_4G006140 Cucumis sativus L. HOM05D006267 ORTHO05D007490 5.4e-102 376.3 597 42.5
Actinidia33723 Actinidia chinensis HOM05D006267 ORTHO05D007490 1.2e-101 375.2 671 38.5
FAN08G1104 Fragaria x ananassa HOM05D006267 ORTHO05D007490 1.5e-99 368.2 675 39.6
FAN13G1859 Fragaria x ananassa HOM05D006267 ORTHO05D007490 1.5e-99 368.2 664 40.4
Lj2A177G41 Lonicera japonica HOM05D006267 ORTHO05D007490 8.0e-98 362.5 643 40.9
FAN04G3088 Fragaria x ananassa HOM05D006267 ORTHO05D007490 6.8e-97 359.4 626 40.9
Hma1.2p1_0216F.1_g091140 Hydrangea macrophylla HOM05D006267 ORTHO05D007490 8.8e-97 359.0 587 42.1
FAN13G1356 Fragaria x ananassa HOM05D006267 ORTHO05D007490 2.0e-96 357.8 664 40.1
Nn1g01698 Nelumbo nucifera HOM05D006267 ORTHO05D007490 3.7e-95 353.6 704 38.1
arahy.Tifrunner.gnm1.ann1.SWZD22 Arachis hypogaea HOM05D006267 ORTHO05D007490 4.1e-94 350.1 597 40.5
arahy.Tifrunner.gnm1.ann1.BRCM5A Arachis hypogaea HOM05D006267 ORTHO05D007490 9.2e-94 349.0 587 40.9
Actinidia27358 Actinidia chinensis HOM05D006267 ORTHO05D007490 1.2e-93 348.6 616 38.0
MELO3C016335.2 Cucumis melo HOM05D006267 ORTHO05D007490 8.6e-92 342.4 593 41.1
Lalb_Chr05g0224451 Lupinus albus HOM05D006267 ORTHO05D007490 5.6e-91 339.7 635 37.8
Psat7g029320 Pisum sativum HOM05D006267 ORTHO05D007490 6.1e-90 336.3 648 38.6
Sed0002932 Sechium edule HOM05D006267 ORTHO05D007490 8.0e-90 335.9 503 43.7
Lalb_Chr09g0333071 Lupinus albus HOM05D006267 ORTHO05D007490 1.4e-89 335.1 585 39.8
TPR.G12935 Trifolium pratense HOM05D006267 ORTHO05D007490 1.8e-89 334.7 659 36.4
Duzib068G0865 Durio zibethinus HOM05D006267 ORTHO05D007490 2.0e-88 331.3 655 38.6
Medtr8g098995 Medicago truncatula HOM05D006267 ORTHO05D007490 1.3e-87 328.6 635 36.9
Sc01g0009910 Simmondsia chinensis HOM05D006267 ORTHO05D007490 2.9e-87 327.4 642 36.9
TAR375G0718 Trochodendron aralioides HOM05D006267 ORTHO05D007490 9.2e-86 322.4 600 37.8
AUR62010761 Chenopodium quinoa HOM05D006267 ORTHO05D007490 4.6e-85 320.1 735 34.6
TAR374G1011 Trochodendron aralioides HOM05D006267 ORTHO05D007490 3.0e-84 317.4 776 34.5
EL10Ac5g12844 Beta vulgaris HOM05D006267 ORTHO05D007490 3.9e-84 317.0 730 33.7
TWI60G1512 Tripterygium wilfordii HOM05D006267 ORTHO05D007490 2.8e-82 310.8 440 45.0
Eucgr.E00783 Eucalyptus grandis HOM05D006267 ORTHO05D007490 4.0e-81 307.0 631 38.2
TWI15G0222 Tripterygium wilfordii HOM05D006267 ORTHO05D007490 1.3e-79 302.0 438 43.8
Hund14261 Selenicereus undatus HOM05D006267 ORTHO05D007490 2.9e-79 300.8 690 33.6
Rhsim07G0086900 Rhododendron simsii HOM05D006267 ORTHO05D007490 4.9e-79 300.1 556 38.5
Hund11430 Selenicereus undatus HOM05D006267 ORTHO05D007490 1.4e-78 298.5 617 36.5
AUR62019762 Chenopodium quinoa HOM05D006267 ORTHO05D007490 6.0e-77 293.1 648 34.7
VMungo1215G1298 Vigna mungo HOM05D006267 ORTHO05D007490 1.5e-75 288.5 617 35.5
TWI81G0535 Tripterygium wilfordii HOM05D006267 ORTHO05D007490 5.6e-75 286.6 436 41.3
Phvul.002G160500 Phaseolus vulgaris HOM05D006267 ORTHO05D007490 1.1e-73 282.3 605 36.2
THA.LOC104817764 Tarenaya hassleriana HOM05D006267 ORTHO05D007490 4.0e-73 280.4 630 35.7
Haze_08744 Corylus avellana HOM05D006267 ORTHO05D007490 5.8e-72 276.6 736 33.3
Cc08_g15330 Coffea canephora HOM05D006267 ORTHO05D007490 5.4e-70 270.0 507 35.5
PGR042G1146 Punica granatum HOM05D006267 ORTHO05D007490 1.3e-68 265.4 706 32.9
Carub.0002s0075 Capsella rubella HOM05D006267 ORTHO05D007490 4.0e-65 253.8 643 33.0
CARHR046900 Cardamine hirsuta HOM05D006267 ORTHO05D007490 2.9e-63 247.7 642 33.2
vmacro13979 Vaccinium macrocarpon HOM05D006267 ORTHO05D007490 4.9e-63 246.9 626 32.1
DCAR_005575 Daucus carota HOM05D006267 ORTHO05D007490 9.2e-62 242.7 622 31.0
ECA246G3109 Erigeron canadensis HOM05D006267 ORTHO05D007490 1.1e-59 235.7 567 34.6
AL2G11010 Arabidopsis lyrata HOM05D006267 ORTHO05D007490 1.5e-59 235.3 639 32.6
HanXRQChr17g0533871 Helianthus annuus HOM05D006267 ORTHO05D007490 2.5e-59 234.6 569 33.7
Sp2g00660 Schrenkiella parvula HOM05D006267 ORTHO05D007490 7.3e-59 233.0 568 34.5
Migut.E01211 Erythranthe guttata HOM05D006267 ORTHO05D007490 1.2e-58 232.3 513 35.9
AT1G64050 Arabidopsis thaliana HOM05D006267 ORTHO05D007490 2.1e-58 231.5 642 32.7
Nitab4.5_0002381g0070 Nicotiana tabacum HOM05D006267 ORTHO05D007490 2.4e-57 228.0 572 35.0
Aa31LG2G1120 Aethionema arabicum HOM05D006267 ORTHO05D007490 6.9e-57 226.5 557 33.6
Thhalv10023327m.g Eutrema salsugineum HOM05D006267 ORTHO05D007490 8.9e-57 226.1 642 33.0
MSTRG.1836 Avicennia marina HOM05D006267 ORTHO05D007490 5.8e-56 223.4 625 31.2
BraA09t37153Z Brassica rapa HOM05D006267 ORTHO05D007490 5.8e-56 223.4 508 36.4
C09p18210 Brassica napus HOM05D006267 ORTHO05D007490 3.8e-55 220.7 507 36.1
BolC9t54717H Brassica oleracea HOM05D006267 ORTHO05D007490 3.8e-55 220.7 507 36.1
SGA_v2.0_scaffold111G31467 Striga asiatica HOM05D006267 ORTHO05D007490 1.1e-54 219.2 472 35.2
A09p15090 Brassica napus HOM05D006267 ORTHO05D007490 2.4e-54 218.0 508 35.4
BcaC04g22526 Brassica carinata HOM05D006267 ORTHO05D007490 7.1e-54 216.5 507 35.9
BcaB07g31428 Brassica carinata HOM05D006267 ORTHO05D007490 7.8e-53 213.0 629 31.6
Aqoxy7G00177 Aquilegia oxysepala HOM05D006267 ORTHO05D007490 1.7e-52 211.8 619 31.7
Lsat_1_v5_gn_3_11600 Lactuca sativa HOM05D006267 ORTHO05D007490 1.7e-52 211.8 577 33.6
MSTRG.13864 Avicennia marina HOM05D006267 ORTHO05D007490 1.1e-51 209.1 504 33.1
MBI04_g06288_MAGBIO Magnolia biondii HOM05D006267 ORTHO05D007490 3.3e-51 207.6 429 35.4
Nitab4.5_0003366g0020 Nicotiana tabacum HOM05D006267 ORTHO05D007490 4.8e-50 203.8 576 32.1
Peaxi162Scf00117g01519 Petunia axillaris HOM05D006267 ORTHO05D007490 3.4e-48 197.6 482 35.1
PSO170G4156 Papaver somniferum HOM05D006267 ORTHO05D007490 1.7e-47 195.3 303 42.6
PSO063G3925 Papaver somniferum HOM05D006267 ORTHO05D007490 6.4e-47 193.4 303 42.9
Sopen12g028680 Solanum pennellii HOM05D006267 ORTHO05D007490 8.7e-44 183.0 648 30.2
Solyc12g056170.2 Solanum lycopersicum HOM05D006267 ORTHO05D007490 4.8e-42 177.2 577 30.7
PGSC0003DMG400004984 Solanum tuberosum HOM05D006267 ORTHO05D007490 2.2e-39 168.3 620 31.3
SHI07081 Sapria himalayana HOM05D006267 ORTHO05D007490 1.1e-38 166.0 277 39.4
CiPaw.11G129100 Carya illinoinensis HOM05D006267 ORTHO05D007490 5.8e-32 143.7 221 41.2
Zm00001eb237760 Zea mays HOM05D006267 ORTHO05D007490 7.4e-27 126.7 531 28.1
ATR0188G022 Amborella trichopoda HOM05D006267 ORTHO05D007490 6.3e-26 123.6 277 34.3
unitig_52.g17233 Utricularia gibba HOM05D006267 ORTHO05D007490 1.4e-25 122.5 376 29.8
HanXRQChr06g0166231 Helianthus annuus HOM05D006267 ORTHO05D007490 3.8e-23 114.4 193 39.9
HPP92_003940 Vanilla planifolia HOM05D006267 ORTHO05D007490 3.8e-23 114.4 280 29.6
CiPaw.11G129200 Carya illinoinensis HOM05D006267 ORTHO05D007490 2.7e-13 81.6 73 58.9
HPP92_023960 Vanilla planifolia HOM05D006267 ORTHO05D007490 9.7e-11 73.2 200 30.5
HPP92_023938 Vanilla planifolia HOM05D006267 ORTHO05D007490 1.7e-10 72.4 115 38.3
CDE03G0464 Ceratophyllum demersum HOM05D000575 ORTHO05D004448 8.2e-10 70.1 402 25.4
Hma1.2p1_0377F.1_g139590 Hydrangea macrophylla HOM05D006267 ORTHO05D007490 2.5e-06 58.5 132 37.1
Psat0s1200g0040 Pisum sativum HOM05D005109 ORTHO05D006084 4.2e-06 57.8 107 39.3


User provided reference genes

Program Settings