Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra01G0069000 Salix brachista HOM05D007275 ORTHO05D009279 2.2e-48 195.3 97 100.0
Potri.001G092700 Populus trichocarpa HOM05D007275 ORTHO05D009279 2.1e-43 178.7 97 91.8
Sabra03G0100000 Salix brachista HOM05D007275 ORTHO05D009279 1.2e-41 172.9 97 86.6
Potri.003G138800 Populus trichocarpa HOM05D007275 ORTHO05D009279 5.8e-41 170.6 97 85.6
QL02p030913 Quercus lobata HOM05D007275 ORTHO05D009279 1.3e-37 159.5 94 81.9
Thecc.03G296000 Theobroma cacao HOM05D007275 ORTHO05D009279 1.3e-37 159.5 94 83.0
Dinv38844 Davidia involucrata HOM05D007275 ORTHO05D009279 1.7e-37 159.1 94 81.9
Gohir.D11G024100 Gossypium hirsutum HOM05D007275 ORTHO05D009279 1.7e-37 159.1 95 80.0
Gorai.007G025800 Gossypium raimondii HOM05D007275 ORTHO05D009279 1.7e-37 159.1 95 80.0
Manes.02G011100 Manihot esculenta HOM05D007275 ORTHO05D009279 1.7e-37 159.1 92 84.8
Gohir.A11G024400 Gossypium hirsutum HOM05D007275 ORTHO05D009279 3.0e-37 158.3 95 80.0
Actinidia22145 Actinidia chinensis HOM05D007275 ORTHO05D009279 6.6e-37 157.1 94 83.0
Ciclev10024283m.g Citrus clementina HOM05D007275 ORTHO05D009279 1.1e-36 156.4 95 80.0
Gohir.D12G236900 Gossypium hirsutum HOM05D007275 ORTHO05D009279 1.1e-36 156.4 94 80.9
Gorai.008G253500 Gossypium raimondii HOM05D007275 ORTHO05D009279 1.1e-36 156.4 94 80.9
Cfa012796 Carpinus fangiana HOM05D007275 ORTHO05D009279 2.5e-36 155.2 95 83.2
Gohir.A12G235700 Gossypium hirsutum HOM05D007275 ORTHO05D009279 2.5e-36 155.2 94 79.8
COL.COLO4_10681 Corchorus olitorius HOM05D007275 ORTHO05D009279 3.3e-36 154.8 94 79.8
Hma1.2p1_0359F.1_g135280 Hydrangea macrophylla HOM05D007275 ORTHO05D009279 3.3e-36 154.8 94 80.9
AUR62010827 Chenopodium quinoa HOM05D007275 ORTHO05D009279 5.6e-36 154.1 94 80.9
Haze_08628 Corylus avellana HOM05D007275 ORTHO05D009279 7.3e-36 153.7 95 81.1
GSVIVG01019513001 Vitis vinifera HOM05D007275 ORTHO05D009279 1.3e-35 152.9 94 79.8
arahy.Tifrunner.gnm1.ann1.IALD8X Arachis hypogaea HOM05D007275 ORTHO05D009279 1.6e-35 152.5 95 76.8
Eucgr.D01727 Eucalyptus grandis HOM05D007275 ORTHO05D009279 1.6e-35 152.5 94 81.9
TAR375G1117 Trochodendron aralioides HOM05D007275 ORTHO05D009279 1.6e-35 152.5 94 79.8
Nn1g01839 Nelumbo nucifera HOM05D007275 ORTHO05D009279 3.6e-35 151.4 94 79.8
Phvul.002G297500 Phaseolus vulgaris HOM05D007275 ORTHO05D009279 4.8e-35 151.0 94 79.8
CSS0010422 Camellia sinensis var. sinensis HOM05D007275 ORTHO05D009279 6.2e-35 150.6 94 78.7
arahy.Tifrunner.gnm1.ann1.GQP3LI Arachis hypogaea HOM05D007275 ORTHO05D009279 1.4e-34 149.4 95 74.7
MD06G1104700 Malus domestica HOM05D007275 ORTHO05D009279 3.1e-34 148.3 94 77.7
MD14G1123400 Malus domestica HOM05D007275 ORTHO05D009279 4.0e-34 147.9 94 78.7
Nn3g19047 Nelumbo nucifera HOM05D007275 ORTHO05D009279 6.9e-34 147.1 94 76.6
EL10Ac5g12903 Beta vulgaris HOM05D007275 ORTHO05D009279 9.0e-34 146.7 94 76.6
Atru.chr9.2015 Acer truncatum HOM05D007275 ORTHO05D009279 1.2e-33 146.4 92 76.1
Prupe.5G117300 Prunus persica HOM05D007275 ORTHO05D009279 1.2e-33 146.4 94 77.7
Peaxi162Scf00074g01033 Petunia axillaris HOM05D007275 ORTHO05D009279 1.5e-33 146.0 92 77.2
MBI06_g46619_MAGBIO Magnolia biondii HOM05D007275 ORTHO05D009279 2.0e-33 145.6 94 75.5
MBI06_g46730_MAGBIO Magnolia biondii HOM05D007275 ORTHO05D000022 2.0e-33 145.6 94 75.5
Sc01g0010220 Simmondsia chinensis HOM05D007275 ORTHO05D009279 2.0e-33 145.6 94 77.7
Cc08_g15930 Coffea canephora HOM05D007275 ORTHO05D009279 2.6e-33 145.2 94 75.5
Glyma.08G022200 Glycine max HOM05D007275 ORTHO05D009279 2.6e-33 145.2 92 78.3
Hma1.2p1_0229F.1_g097175 Hydrangea macrophylla HOM05D007275 ORTHO05D009279 2.6e-33 145.2 95 75.8
Hma1.2p1_0229F.1_g097200 Hydrangea macrophylla HOM05D007275 ORTHO05D009279 2.6e-33 145.2 95 75.8
PGR031G2423 Punica granatum HOM05D007275 ORTHO05D009279 2.6e-33 145.2 94 75.5
Glyma.05G216300 Glycine max HOM05D007275 ORTHO05D009279 3.4e-33 144.8 92 78.3
Lj4g0015273 Lotus japonicus HOM05D007275 ORTHO05D009279 3.4e-33 144.8 92 78.3
TPR.G3422 Trifolium pratense HOM05D007275 ORTHO05D009279 3.4e-33 144.8 94 73.4
Nitab4.5_0010144g0020 Nicotiana tabacum HOM05D007275 ORTHO05D009279 4.5e-33 144.4 94 74.5
PGSC0003DMG400012158 Solanum tuberosum HOM05D007275 ORTHO05D009279 4.5e-33 144.4 94 74.5
CSS0024458 Camellia sinensis var. sinensis HOM05D007275 ORTHO05D009279 5.8e-33 144.1 94 77.7
CiPaw.12G084200 Carya illinoinensis HOM05D007275 ORTHO05D009279 5.8e-33 144.1 94 75.5
TAR629G0721 Trochodendron aralioides HOM05D007275 ORTHO05D010861 5.8e-33 144.1 95 76.8
CAN.G532.107 Capsicum annuum HOM05D007275 ORTHO05D009279 1.3e-32 142.9 94 74.5
Dinv37542 Davidia involucrata HOM05D007275 ORTHO05D009279 2.2e-32 142.1 82 85.4
Peaxi162Scf00117g01123 Petunia axillaris HOM05D007275 ORTHO05D009279 3.8e-32 141.4 94 75.5
Lalb_Chr16g0390621 Lupinus albus HOM05D007275 ORTHO05D009279 4.9e-32 141.0 95 70.5
Solyc08g082160.3 Solanum lycopersicum HOM05D007275 ORTHO05D009279 6.4e-32 140.6 94 73.4
Sopen08g030440 Solanum pennellii HOM05D007275 ORTHO05D009279 6.4e-32 140.6 94 73.4
Nitab4.5_0000223g0330 Nicotiana tabacum HOM05D007275 ORTHO05D009279 2.4e-31 138.7 94 71.3
RcHm_v2.0_Chr7g0195121 Rosa chinensis HOM05D007275 ORTHO05D009279 3.2e-31 138.3 94 73.4
TWI60G1254 Tripterygium wilfordii HOM05D007275 ORTHO05D009279 3.2e-31 138.3 92 73.9
Oeu038573.1 Olea europaea HOM05D007275 ORTHO05D009279 7.1e-31 137.1 94 70.2
Nitab4.5_0000726g0090 Nicotiana tabacum HOM05D007275 ORTHO05D009279 1.6e-30 136.0 90 73.3
DCAR_005035 Daucus carota HOM05D007275 ORTHO05D009279 2.7e-30 135.2 88 75.0
SalBow1G0766 Salvia bowleyana HOM05D007275 ORTHO05D009279 6.0e-30 134.0 94 70.2
SalBow1G5261 Salvia bowleyana HOM05D007275 ORTHO05D009279 1.3e-29 132.9 94 69.1
FvH4_5g04420 Fragaria vesca HOM05D007275 ORTHO05D009279 3.9e-29 131.3 95 69.5
FAN18G1142 Fragaria x ananassa HOM05D007275 ORTHO05D009279 3.9e-29 131.3 95 69.5
FAN18G2266 Fragaria x ananassa HOM05D007275 ORTHO05D009279 3.9e-29 131.3 95 69.5
Migut.A00668 Erythranthe guttata HOM05D007275 ORTHO05D009279 5.1e-29 131.0 90 68.9
FAN08G0060 Fragaria x ananassa HOM05D007275 ORTHO05D009279 5.1e-29 131.0 94 69.1
Medtr8g099385 Medicago truncatula HOM05D007275 ORTHO05D009279 5.1e-29 131.0 93 71.0
Aqoxy7G00131 Aquilegia oxysepala HOM05D007275 ORTHO05D009279 1.1e-28 129.8 94 68.1
CANSAT21G2355 Cannabis sativa HOM05D007275 ORTHO05D009279 1.5e-28 129.4 96 70.8
FvH4_3g01740 Fragaria vesca HOM05D007275 ORTHO05D009279 5.6e-28 127.5 95 68.4
Lsat_1_v5_gn_3_10301 Lactuca sativa HOM05D007275 ORTHO05D009279 9.6e-28 126.7 95 66.3
ECA246G4125 Erigeron canadensis HOM05D007275 ORTHO05D009279 1.3e-27 126.3 96 64.6
ClCG07G014960 Citrullus lanatus HOM05D007275 ORTHO05D009279 2.1e-27 125.6 89 68.5
AUR62019826 Chenopodium quinoa HOM05D007275 ORTHO05D009279 1.1e-26 123.2 75 78.7
HanXRQChr06g0166541 Helianthus annuus HOM05D007275 ORTHO05D009279 1.4e-26 122.9 86 69.8
MELO3C032816.2 Cucumis melo HOM05D007275 ORTHO05D009279 2.4e-26 122.1 94 66.0
Ah.12g052450 Amaranthus hybridus HOM05D006525 ORTHO05D007845 4.0e-26 121.3 75 77.3
CsaV3_4G006490 Cucumis sativus L. HOM05D007275 ORTHO05D009279 4.0e-26 121.3 95 65.3
HanXRQChr17g0535191 Helianthus annuus HOM05D007275 ORTHO05D009279 5.3e-26 120.9 86 66.3
Zm00001eb338790 Zea mays HOM05D007275 ORTHO05D009279 6.9e-26 120.6 95 67.4
FAN13G1788 Fragaria x ananassa HOM05D007275 ORTHO05D009279 5.8e-25 117.5 123 53.7
Sed0004885 Sechium edule HOM05D007275 ORTHO05D009279 5.8e-25 117.5 95 64.2
BcaC09g50944 Brassica carinata HOM05D007275 ORTHO05D009279 1.9e-23 112.5 94 56.4
A01p15130 Brassica napus HOM05D007275 ORTHO05D009279 1.9e-23 112.5 94 56.4
C01p19030 Brassica napus HOM05D007275 ORTHO05D009279 1.9e-23 112.5 94 56.4
BolC1t01829H Brassica oleracea HOM05D007275 ORTHO05D009279 1.9e-23 112.5 94 56.4
Psat7g026480 Pisum sativum HOM05D007275 ORTHO05D009279 1.9e-23 112.5 92 63.0
BcaNung01088 Brassica carinata HOM05D007275 ORTHO05D009279 2.4e-23 112.1 94 57.4
BcaNung01089 Brassica carinata HOM05D007275 ORTHO05D009279 2.4e-23 112.1 94 57.4
CDE10G0242 Ceratophyllum demersum HOM05D000974 ORTHO05D002201 3.2e-23 111.7 81 67.9
Hma1.2p1_2596F.1_g325120 Hydrangea macrophylla HOM05D007275 ORTHO05D009279 3.2e-23 111.7 68 80.9
Duzib068G1121 Durio zibethinus HOM05D007275 ORTHO05D009279 4.2e-23 111.3 69 81.2
ATR0320G041 Amborella trichopoda HOM05D007275 ORTHO05D009279 5.5e-23 110.9 89 62.9
CDE10G0124 Ceratophyllum demersum HOM05D007275 ORTHO05D009279 1.6e-22 109.4 82 65.9
CSS0026606 Camellia sinensis var. sinensis HOM05D007275 ORTHO05D009279 2.1e-22 109.0 68 75.0
unitig_748.g8124 Utricularia gibba HOM05D007275 ORTHO05D009279 2.1e-22 109.0 86 67.4
Nitab4.5_0007661g0010 Nicotiana tabacum HOM05D007275 ORTHO05D009279 3.5e-22 108.2 71 70.4
Oeu063532.1 Olea europaea HOM05D007275 ORTHO05D009279 1.8e-21 105.9 84 64.3
SEGI_25349 Sequoiadendron giganteum HOM05D007275 ORTHO05D009279 8.2e-19 97.1 94 52.1
Rhsim02G0242000 Rhododendron simsii HOM05D007275 ORTHO05D009279 1.1e-18 96.7 82 63.4
FAN04G0348 Fragaria x ananassa HOM05D007275 ORTHO05D009279 2.9e-16 88.6 95 51.6
Thhalv10027148m.g Eutrema salsugineum HOM05D007275 ORTHO05D009279 1.0e-13 80.1 67 58.2
Lalb_Chr16g0390631 Lupinus albus HOM05D007275 ORTHO05D009279 1.1e-12 76.6 50 70.0
Aqoxy2G01184 Aquilegia oxysepala HOM05D000015 ORTHO05D009146 3.6e-06 55.1 93 41.9
CiPaw.08G033100 Carya illinoinensis HOM05D000015 ORTHO05D003525 6.1e-06 54.3 70 42.9
HanXRQChr15g0470561 Helianthus annuus HOM05D000015 ORTHO05D009146 6.1e-06 54.3 75 44.0
Aqoxy1G02962 Aquilegia oxysepala HOM05D000015 ORTHO05D009146 7.9e-06 53.9 94 40.4
Manes.17G027600 Manihot esculenta HOM05D000015 ORTHO05D009146 7.9e-06 53.9 79 40.5


User provided reference genes

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