Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra01G0068400 Salix brachista HOM05D006572 ORTHO05D008181 1.4e-262 909.4 595 100.0
Potri.001G092000 Populus trichocarpa HOM05D006572 ORTHO05D008181 7.8e-205 717.6 596 84.6
Manes.02G010400 Manihot esculenta HOM05D006572 ORTHO05D008181 3.0e-148 529.6 574 68.1
Duzib205G1524 Durio zibethinus HOM05D006572 ORTHO05D008181 4.2e-142 509.2 583 65.5
Thecc.03G297200 Theobroma cacao HOM05D006572 ORTHO05D008181 5.2e-140 502.3 596 60.7
TWI60G0540 Tripterygium wilfordii HOM05D006572 ORTHO05D008181 2.8e-138 496.5 578 65.9
COL.COLO4_10694 Corchorus olitorius HOM05D006572 ORTHO05D008181 6.3e-138 495.4 609 51.6
Phvul.002G297700 Phaseolus vulgaris HOM05D006572 ORTHO05D008181 4.5e-128 462.6 593 62.1
Rhsim02G0242800 Rhododendron simsii HOM05D006572 ORTHO05D008181 5.9e-128 462.2 576 62.8
Gohir.A02G101400 Gossypium hirsutum HOM05D006572 ORTHO05D008181 2.6e-123 446.8 577 62.2
Lj8C208G13 Lonicera japonica HOM05D006572 ORTHO05D008181 2.6e-123 446.8 569 62.9
Gorai.003G080600 Gossypium raimondii HOM05D006572 ORTHO05D008181 3.4e-123 446.4 584 62.0
Gohir.D03G082800 Gossypium hirsutum HOM05D006572 ORTHO05D008181 4.4e-123 446.0 584 56.2
Glyma.05G216500 Glycine max HOM05D006572 ORTHO05D008181 5.7e-123 445.7 596 59.7
Duzib068G0791 Durio zibethinus HOM05D006572 ORTHO05D008181 9.8e-123 444.9 580 61.4
Ciclev10019283m.g Citrus clementina HOM05D006572 ORTHO05D008181 2.8e-122 443.4 621 56.0
VMungo0251G1431 Vigna mungo HOM05D006572 ORTHO05D008181 1.2e-120 438.0 600 52.8
FAN18G4203 Fragaria x ananassa HOM05D006572 ORTHO05D008181 7.7e-120 435.3 608 50.3
FAN18G3438 Fragaria x ananassa HOM05D006572 ORTHO05D008181 2.3e-119 433.7 593 48.1
Lj4g0027687 Lotus japonicus HOM05D006572 ORTHO05D008181 2.9e-119 433.3 544 53.7
Lalb_Chr05g0224161 Lupinus albus HOM05D006572 ORTHO05D008181 5.0e-119 432.6 578 56.6
Eucgr.E00859 Eucalyptus grandis HOM05D006572 ORTHO05D008181 2.1e-117 427.2 573 51.5
FAN04G0113 Fragaria x ananassa HOM05D006572 ORTHO05D008181 3.6e-117 426.4 597 42.4
CSS0002826 Camellia sinensis var. sinensis HOM05D006572 ORTHO05D008181 4.7e-117 426.0 578 58.8
CiPaw.12G083500 Carya illinoinensis HOM05D006572 ORTHO05D008181 6.1e-117 425.6 568 63.0
FvH4_5g04510 Fragaria vesca HOM05D006572 ORTHO05D008181 3.4e-115 419.9 598 50.2
EL10Ac5g12911 Beta vulgaris HOM05D006572 ORTHO05D008181 1.3e-114 417.9 598 55.7
Actinidia04204 Actinidia chinensis HOM05D006572 ORTHO05D008181 4.9e-114 416.0 577 60.5
Migut.A00646 Erythranthe guttata HOM05D006572 ORTHO05D008181 3.2e-113 413.3 571 57.6
AUR62019834 Chenopodium quinoa HOM05D006572 ORTHO05D008181 1.6e-112 411.0 550 62.2
HanXRQChr02g0047891 Helianthus annuus HOM05D006572 ORTHO05D008181 2.7e-112 410.2 571 59.0
SHI08936 Sapria himalayana HOM05D006572 ORTHO05D008181 5.9e-112 409.1 609 53.9
MD14G1128100 Malus domestica HOM05D006572 ORTHO05D008181 1.3e-111 407.9 582 59.8
Medtr8g099415 Medicago truncatula HOM05D006572 ORTHO05D008181 3.3e-110 403.3 587 47.0
GSVIVG01019526001 Vitis vinifera HOM05D006572 ORTHO05D008181 3.3e-110 403.3 582 55.7
MSTRG.25670 Avicennia marina HOM05D006572 ORTHO05D008181 1.2e-109 401.4 573 55.8
Psat7g026640 Pisum sativum HOM05D006572 ORTHO05D008181 1.4e-108 397.9 580 56.9
Prupe.5G118200 Prunus persica HOM05D006572 ORTHO05D008181 4.0e-108 396.4 578 51.2
Oeu031670.2 Olea europaea HOM05D006572 ORTHO05D008181 5.2e-108 396.0 625 55.5
SalBow1G0494 Salvia bowleyana HOM05D006572 ORTHO05D008181 1.5e-107 394.4 528 56.8
ECA233G0093 Erigeron canadensis HOM05D006572 ORTHO05D008181 7.5e-107 392.1 590 52.4
FAN08G2039 Fragaria x ananassa HOM05D006572 ORTHO05D008181 1.3e-106 391.3 604 48.7
RcHm_v2.0_Chr7g0194941 Rosa chinensis HOM05D006572 ORTHO05D008181 3.0e-103 380.2 603 55.7
Nitab4.5_0005537g0050 Nicotiana tabacum HOM05D006572 ORTHO05D008181 6.6e-103 379.0 565 49.6
Aqoxy5G04214 Aquilegia oxysepala HOM05D006572 ORTHO05D008181 2.5e-102 377.1 586 55.8
vmacro11428 Vaccinium macrocarpon HOM05D006572 ORTHO05D008181 4.3e-102 376.3 595 55.1
BcaNung04237 Brassica carinata HOM05D006572 ORTHO05D008181 4.7e-101 372.9 582 56.2
C07p53150 Brassica napus HOM05D006572 ORTHO05D008181 4.7e-101 372.9 582 56.2
Nn3g19021 Nelumbo nucifera HOM05D006572 ORTHO05D008181 6.2e-101 372.5 580 58.4
A03p54790 Brassica napus HOM05D006572 ORTHO05D008181 5.2e-100 369.4 581 54.9
BraA03t14546Z Brassica rapa HOM05D006572 ORTHO05D008181 5.2e-100 369.4 581 54.9
PGR042G1206 Punica granatum HOM05D006572 ORTHO05D008181 5.2e-100 369.4 578 57.1
BolC7t45811H Brassica oleracea HOM05D006572 ORTHO05D008181 5.8e-99 365.9 582 55.8
TAR636G1103 Trochodendron aralioides HOM05D006572 ORTHO05D008181 1.3e-98 364.8 523 61.8
Dinv37535 Davidia involucrata HOM05D006572 ORTHO05D008181 4.9e-98 362.8 359 66.3
Sopen08g030540 Solanum pennellii HOM05D006572 ORTHO05D008181 1.4e-97 361.3 595 55.0
arahy.Tifrunner.gnm1.ann1.GR96MW Arachis hypogaea HOM05D006572 ORTHO05D008181 2.4e-97 360.5 586 54.8
PGSC0003DMG400012287 Solanum tuberosum HOM05D006572 ORTHO05D008181 3.2e-97 360.1 595 54.1
Lsat_1_v5_gn_6_12380 Lactuca sativa HOM05D006572 ORTHO05D008181 1.2e-96 358.2 571 54.3
Solyc08g082270.3 Solanum lycopersicum HOM05D006572 ORTHO05D008181 1.2e-96 358.2 595 54.1
Cc08_g16020 Coffea canephora HOM05D006572 ORTHO05D008181 1.6e-96 357.8 559 56.7
SGA_v2.0_scaffold96G28963 Striga asiatica HOM05D006572 ORTHO05D008181 6.0e-96 355.9 598 52.2
Hund11391 Selenicereus undatus HOM05D006572 ORTHO05D008181 3.0e-95 353.6 577 53.6
Ah.12g052520 Amaranthus hybridus HOM05D006572 ORTHO05D008181 5.1e-95 352.8 576 54.7
Haze_08618 Corylus avellana HOM05D006572 ORTHO05D008181 5.1e-95 352.8 516 56.0
Peaxi162Scf00074g00932 Petunia axillaris HOM05D006572 ORTHO05D008181 6.6e-95 352.4 573 48.7
arahy.Tifrunner.gnm1.ann1.Z469MH Arachis hypogaea HOM05D006572 ORTHO05D008181 8.6e-95 352.1 581 54.6
Nitab4.5_0001231g0070 Nicotiana tabacum HOM05D006572 ORTHO05D008181 1.1e-94 351.7 572 50.3
CANSAT21G1897 Cannabis sativa HOM05D006572 ORTHO05D008181 8.1e-93 345.5 571 54.8
Dinv38835 Davidia involucrata HOM05D006572 ORTHO05D008181 1.8e-92 344.4 468 63.7
CARHR231220 Cardamine hirsuta HOM05D006572 ORTHO05D008181 3.1e-92 343.6 577 56.8
MBI06_g08449_MAGBIO Magnolia biondii HOM05D006572 ORTHO05D008181 1.7e-90 337.8 456 55.3
DCAR_029886 Daucus carota HOM05D006572 ORTHO05D008181 2.2e-90 337.4 597 46.6
Sed0014568 Sechium edule HOM05D006572 ORTHO05D008181 3.7e-90 336.7 539 48.8
Cfa021209 Carpinus fangiana HOM05D006572 ORTHO05D008181 1.1e-89 335.1 496 58.9
ATR0188G004 Amborella trichopoda HOM05D006572 ORTHO05D008181 7.8e-88 328.9 519 59.0
AUR62010836 Chenopodium quinoa HOM05D006572 ORTHO05D008181 7.8e-88 328.9 572 53.5
TAR629G2735 Trochodendron aralioides HOM05D006572 ORTHO05D008181 1.8e-84 317.8 385 57.1
TPR.G3379 Trifolium pratense HOM05D006572 ORTHO05D008181 1.4e-81 308.1 595 51.4
ClCG07G015010 Citrullus lanatus HOM05D006572 ORTHO05D008181 2.4e-81 307.4 584 48.5
PSO384G1203 Papaver somniferum HOM05D006572 ORTHO05D008181 6.0e-80 302.8 584 49.1
MELO3C016288.2 Cucumis melo HOM05D006572 ORTHO05D008181 1.5e-78 298.1 602 43.4
Atru.BG.201.p Acer truncatum HOM05D006572 ORTHO05D008181 7.3e-78 295.8 369 64.2
CAN.G532.118 Capsicum annuum HOM05D006572 ORTHO05D008181 5.8e-75 286.2 434 54.8
AL7G29520 Arabidopsis lyrata HOM05D006572 ORTHO05D008181 8.7e-71 272.3 572 52.6
AT4G23840 Arabidopsis thaliana HOM05D006572 ORTHO05D008181 1.5e-70 271.6 570 50.9
Sc22g0005020 Simmondsia chinensis HOM05D006572 ORTHO05D008181 3.6e-69 266.9 462 58.2
Os05g0212200 Oryza sativa ssp. japonica HOM05D006572 ORTHO05D008181 4.0e-68 263.5 594 42.6
Sp7g21790 Schrenkiella parvula HOM05D006572 ORTHO05D008181 3.4e-67 260.4 579 50.3
Thhalv10024706m.g Eutrema salsugineum HOM05D006572 ORTHO05D008181 2.9e-66 257.3 578 50.7
Carub.0007s1729 Capsella rubella HOM05D006572 ORTHO05D008181 1.1e-65 255.4 575 50.1
SEGI_00989 Sequoiadendron giganteum HOM05D006572 ORTHO05D008181 9.3e-65 252.3 562 47.9
Ca_17483_v3 Cicer arietinum L. HOM05D006572 ORTHO05D008181 2.1e-64 251.1 585 39.0
Ca_17508_v3 Cicer arietinum L. HOM05D006572 ORTHO05D008181 2.1e-64 251.1 585 39.0
THA.LOC104815028 Tarenaya hassleriana HOM05D006572 ORTHO05D008181 1.0e-63 248.8 575 43.1
BcaNung04088 Brassica carinata HOM05D006572 ORTHO05D008181 4.8e-61 240.0 520 52.5
HPP92_024023 Vanilla planifolia HOM05D006572 ORTHO05D008181 1.1e-60 238.8 581 47.8
CDE03G0094 Ceratophyllum demersum HOM05D006572 ORTHO05D008181 1.8e-60 238.0 558 50.9
Zm00001eb350650 Zea mays HOM05D006572 ORTHO05D008181 7.6e-59 232.6 511 43.1
Pp3c22_12260 Physcomitrium patens HOM05D006572 ORTHO05D008181 1.0e-58 232.3 547 29.4
SMO232G0056 Selaginella moellendorffii HOM05D006572 ORTHO05D008181 1.6e-56 224.9 519 44.7
Aa31LG6G7050 Aethionema arabicum HOM05D006572 ORTHO05D008181 1.3e-55 221.9 586 47.6
CsaV3_4G006550 Cucumis sativus L. HOM05D006572 ORTHO05D008181 2.3e-55 221.1 511 42.3
FAN13G1782 Fragaria x ananassa HOM05D006572 ORTHO05D008181 4.4e-30 137.1 307 32.2
unitig_748.g8130 Utricularia gibba HOM05D006572 ORTHO05D008181 3.8e-26 124.0 331 48.9
TAR376G0673 Trochodendron aralioides HOM05D006572 ORTHO05D008181 3.2e-25 120.9 152 48.0
unitig_748.g8129 Utricularia gibba HOM05D006572 ORTHO05D008181 1.8e-23 115.2 158 44.3
Dinv37534 Davidia involucrata HOM05D006572 ORTHO05D008181 1.3e-18 99.0 144 55.6
CBR_g39933 Chara braunii HOM05D006572 ORTHO05D008181 3.2e-09 67.8 459 35.9
QL12p023582 Quercus lobata HOM05D006572 ORTHO05D008181 3.2e-09 67.8 48 70.8
QL93p2003_0058 Quercus lobata HOM05D006572 ORTHO05D008181 9.5e-09 66.2 48 68.8
Hma1.2p1_0450F.1_g155520 Hydrangea macrophylla HOM05D006572 ORTHO05D008181 4.4e-06 57.4 42 64.3
Hma1.2p1_1530F.1_g289190 Hydrangea macrophylla HOM05D006572 ORTHO05D008181 9.8e-06 56.2 42 64.3


User provided reference genes

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