Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra01G0067800 Salix brachista HOM05D007727 ORTHO05D009078 6.6e-79 297.4 155 100.0
Sabra01G0067700 Salix brachista HOM05D007727 ORTHO05D009078 3.1e-76 288.5 154 95.5
Potri.001G091400 Populus trichocarpa HOM05D007727 ORTHO05D009078 3.9e-47 191.8 139 74.1
Potri.004G151000 Populus trichocarpa HOM05D007727 ORTHO05D009078 4.0e-36 155.2 133 63.2
Potri.003G140200 Populus trichocarpa HOM05D007727 ORTHO05D009078 2.0e-35 152.9 133 63.9
Potri.003G140233 Populus trichocarpa HOM05D007727 ORTHO05D009078 2.0e-35 152.9 133 63.9
Potri.003G140266 Populus trichocarpa HOM05D007727 ORTHO05D009078 1.1e-33 147.1 128 64.1
Manes.02G009800 Manihot esculenta HOM05D007727 ORTHO05D009078 4.9e-26 121.7 126 56.3
Sabra03G0101200 Salix brachista HOM05D007727 ORTHO05D009078 2.8e-21 105.9 131 49.6
Hma1.2p1_1461F.1_g285070 Hydrangea macrophylla HOM05D007727 ORTHO05D009078 7.6e-19 97.8 141 42.6
Prupe.5G120300 Prunus persica HOM05D007727 ORTHO05D009078 7.6e-19 97.8 149 47.0
CiPaw.12G082800 Carya illinoinensis HOM05D007727 ORTHO05D009078 1.0e-18 97.4 143 44.1
Cfa012003 Carpinus fangiana HOM05D007727 ORTHO05D009078 1.3e-18 97.1 140 43.6
Cfa012008 Carpinus fangiana HOM05D007727 ORTHO05D009078 1.3e-18 97.1 140 43.6
Haze_09065 Corylus avellana HOM05D007727 ORTHO05D009078 2.2e-18 96.3 137 43.1
Haze_09064 Corylus avellana HOM05D007727 ORTHO05D009078 2.9e-18 95.9 111 52.3
Dinv38830 Davidia involucrata HOM05D007727 ORTHO05D009078 2.9e-18 95.9 126 47.6
Duzib205G0888 Durio zibethinus HOM05D007727 ORTHO05D009078 3.8e-18 95.5 144 43.8
Cfa012009 Carpinus fangiana HOM05D007727 ORTHO05D009078 6.5e-18 94.7 111 53.2
CiPaw.12G082600 Carya illinoinensis HOM05D007727 ORTHO05D009078 8.4e-18 94.4 129 47.3
Hma1.2p1_1746F.1_g300420 Hydrangea macrophylla HOM05D007727 ORTHO05D009078 1.9e-17 93.2 148 41.2
QL02p030384 Quercus lobata HOM05D007727 ORTHO05D009078 1.9e-17 93.2 118 48.3
QL02p030408 Quercus lobata HOM05D007727 ORTHO05D009078 1.9e-17 93.2 119 51.3
CSS0019090 Camellia sinensis var. sinensis HOM05D007727 ORTHO05D009078 3.2e-17 92.4 160 38.8
COL.COLO4_10705 Corchorus olitorius HOM05D007727 ORTHO05D009078 3.2e-17 92.4 140 42.1
QL02p030393 Quercus lobata HOM05D007727 ORTHO05D009078 4.2e-17 92.0 119 51.3
Eucgr.D01744 Eucalyptus grandis HOM05D007727 ORTHO05D009078 9.3e-17 90.9 116 50.9
QL02p030389 Quercus lobata HOM05D007727 ORTHO05D009078 9.3e-17 90.9 119 49.6
Thecc.03G298300 Theobroma cacao HOM05D007727 ORTHO05D009078 9.3e-17 90.9 156 38.5
FAN13G2104 Fragaria x ananassa HOM05D007727 ORTHO05D009078 2.7e-16 89.4 141 43.3
FAN13G3265 Fragaria x ananassa HOM05D007727 ORTHO05D009078 2.7e-16 89.4 141 43.3
FAN08G2749 Fragaria x ananassa HOM05D007727 ORTHO05D009078 6.1e-16 88.2 140 42.1
Rhsim02G0244000 Rhododendron simsii HOM05D007727 ORTHO05D009078 6.1e-16 88.2 144 39.6
FvH4_5g04620 Fragaria vesca HOM05D007727 ORTHO05D009078 7.9e-16 87.8 140 42.9
FAN18G4426 Fragaria x ananassa HOM05D007727 ORTHO05D009078 7.9e-16 87.8 140 42.9
Rhsim02G0243900 Rhododendron simsii HOM05D007727 ORTHO05D009078 7.9e-16 87.8 144 39.6
Rhsim02G0243800 Rhododendron simsii HOM05D007727 ORTHO05D009078 1.0e-15 87.4 120 44.2
CSS0050195 Camellia sinensis var. sinensis HOM05D007727 ORTHO05D009078 3.0e-15 85.9 139 43.2
Glyma.11G017500 Glycine max HOM05D007727 ORTHO05D009078 3.0e-15 85.9 112 50.0
FAN18G0179 Fragaria x ananassa HOM05D007727 ORTHO05D009078 3.9e-15 85.5 140 41.4
CiPaw.11G121100 Carya illinoinensis HOM05D007727 ORTHO05D009078 5.1e-15 85.1 110 49.1
Eucgr.D01747 Eucalyptus grandis HOM05D007727 ORTHO05D009078 5.1e-15 85.1 116 49.1
Hma1.2p1_1461F.1_g285060 Hydrangea macrophylla HOM05D007727 ORTHO05D009078 5.1e-15 85.1 66 62.1
Hma1.2p1_2808F.1_g328866 Hydrangea macrophylla HOM05D007727 ORTHO05D009078 5.1e-15 85.1 66 62.1
Rhsim02G0243700 Rhododendron simsii HOM05D007727 ORTHO05D009078 8.7e-15 84.3 142 38.7
Gorai.004G133300 Gossypium raimondii HOM05D007727 ORTHO05D009078 1.5e-14 83.6 159 42.8
Glyma.08G023200 Glycine max HOM05D007727 ORTHO05D009078 2.5e-14 82.8 105 45.7
Gohir.D08G130400 Gossypium hirsutum HOM05D007727 ORTHO05D009078 3.3e-14 82.4 137 42.3
Rhsim02G0243600 Rhododendron simsii HOM05D007727 ORTHO05D009078 3.3e-14 82.4 114 45.6
FAN04G2059 Fragaria x ananassa HOM05D007727 ORTHO05D009078 5.7e-14 81.6 121 43.0
Glyma.01G225500 Glycine max HOM05D007727 ORTHO05D009078 7.4e-14 81.3 104 49.0
Ciclev10022327m.g Citrus clementina HOM05D007727 ORTHO05D009078 9.7e-14 80.9 143 42.7
VMungo1215G2373 Vigna mungo HOM05D007727 ORTHO05D009078 1.6e-13 80.1 105 48.6
LjContig00312_ERROPOS870357g0016151 Lotus japonicus HOM05D007727 ORTHO05D009078 3.7e-13 79.0 129 42.6
CANSAT21G1217 Cannabis sativa HOM05D007727 ORTHO05D009078 1.1e-12 77.4 78 56.4
Eucgr.D01742 Eucalyptus grandis HOM05D007727 ORTHO05D009078 1.8e-12 76.6 65 60.0
Phvul.002G164400 Phaseolus vulgaris HOM05D007727 ORTHO05D009078 1.8e-12 76.6 109 46.8
Lalb_Chr05g0224131 Lupinus albus HOM05D007727 ORTHO05D009078 4.1e-12 75.5 119 42.0
Gohir.A08G103450 Gossypium hirsutum HOM05D007727 ORTHO05D009078 9.0e-12 74.3 157 38.2
Glyma.05G216900 Glycine max HOM05D007727 ORTHO05D009078 2.0e-11 73.2 103 43.7
Lj4g0015473 Lotus japonicus HOM05D007727 ORTHO05D009078 2.0e-11 73.2 107 42.1
VMungo0251G2989 Vigna mungo HOM05D007727 ORTHO05D009078 2.0e-11 73.2 99 44.4
Gohir.D03G083800 Gossypium hirsutum HOM05D007727 ORTHO05D009078 2.6e-11 72.8 62 59.7
Gorai.003G078900 Gossypium raimondii HOM05D007727 ORTHO05D009078 2.6e-11 72.8 62 59.7
Glyma.08G022800 Glycine max HOM05D007727 ORTHO05D009078 3.4e-11 72.4 103 45.6
Glyma.05G217200 Glycine max HOM05D007727 ORTHO05D009078 4.5e-11 72.0 105 41.9
Oeu031672.1 Olea europaea HOM05D007727 ORTHO05D009078 4.5e-11 72.0 103 45.6
Gohir.A02G100000 Gossypium hirsutum HOM05D007727 ORTHO05D009078 5.9e-11 71.6 74 55.4
Oeu031673.1 Olea europaea HOM05D007727 ORTHO05D009078 7.7e-11 71.2 104 44.2
Nitab4.5_0001210g0030 Nicotiana tabacum HOM05D011491 ORTHO05D009078 1.0e-10 70.9 118 39.0
TAR374G1599 Trochodendron aralioides HOM05D026466 ORTHO05D009078 1.0e-10 70.9 159 36.5
MSTRG.25675 Avicennia marina HOM05D007727 ORTHO05D009078 1.3e-10 70.5 91 51.6
Medtr8g099485 Medicago truncatula HOM05D007727 ORTHO05D009078 2.2e-10 69.7 97 43.3
Peaxi162Scf00074g00092 Petunia axillaris HOM05D011491 ORTHO05D009078 2.9e-10 69.3 110 42.7
Phvul.002G298200 Phaseolus vulgaris HOM05D007727 ORTHO05D009078 3.8e-10 68.9 100 38.0
Phvul.002G298600 Phaseolus vulgaris HOM05D007727 ORTHO05D009078 3.8e-10 68.9 100 38.0
ClCG07G011610 Citrullus lanatus HOM05D007727 ORTHO05D009078 5.0e-10 68.6 109 44.0
PGSC0003DMG400012146 Solanum tuberosum HOM05D011491 ORTHO05D009078 5.0e-10 68.6 68 55.9
TAR374G1217 Trochodendron aralioides HOM05D026466 ORTHO05D009078 5.0e-10 68.6 155 35.5
Sopen08g030640 Solanum pennellii HOM05D011491 ORTHO05D009078 6.5e-10 68.2 47 68.1
TPR.G3394 Trifolium pratense HOM05D007727 ORTHO05D009078 8.5e-10 67.8 106 36.8
CsaV3_4G006600 Cucumis sativus L. HOM05D007727 ORTHO05D009078 1.4e-09 67.0 120 39.2
PGSC0003DMG400012147 Solanum tuberosum HOM05D011491 ORTHO05D009078 1.4e-09 67.0 66 56.1
MELO3C016295.2 Cucumis melo HOM05D007727 ORTHO05D009078 2.5e-09 66.2 119 39.5
PGSC0003DMG400012144 Solanum tuberosum HOM05D011491 ORTHO05D009078 2.5e-09 66.2 125 38.4
TPR.G11121 Trifolium pratense HOM05D007727 ORTHO05D009078 2.5e-09 66.2 124 32.3
CAN.G1804.6 Capsicum annuum HOM05D011491 ORTHO05D009078 9.4e-09 64.3 118 36.4
ECA240G1351 Erigeron canadensis HOM05D007727 ORTHO05D009078 9.4e-09 64.3 64 54.7
Nitab4.5_0002782g0050 Nicotiana tabacum HOM05D011491 ORTHO05D009078 9.4e-09 64.3 48 60.4
Lj4g0008549 Lotus japonicus HOM05D007727 ORTHO05D009078 1.2e-08 63.9 113 39.8
Medtr5g009290 Medicago truncatula HOM05D007727 ORTHO05D009078 1.2e-08 63.9 112 39.3
TPR.G3425 Trifolium pratense HOM05D007727 ORTHO05D009078 3.6e-08 62.4 91 39.6
TPR.G3415 Trifolium pratense HOM05D007727 ORTHO05D009078 4.6e-08 62.0 92 40.2
Solyc08g082380.1 Solanum lycopersicum HOM05D011491 ORTHO05D009078 6.1e-08 61.6 114 38.6
TPR.G25603 Trifolium pratense HOM05D007727 ORTHO05D009078 6.1e-08 61.6 119 40.3
AUR62010842 Chenopodium quinoa HOM05D007727 ORTHO05D009078 7.9e-08 61.2 85 40.0
CAN.G1804.7 Capsicum annuum HOM05D011491 ORTHO05D009078 1.4e-07 60.5 116 35.3
Psat2g185360 Pisum sativum HOM05D007727 ORTHO05D009078 1.4e-07 60.5 123 35.8
MSTRG.25674 Avicennia marina HOM05D007727 ORTHO05D009078 2.3e-07 59.7 109 37.6
PGSC0003DMG400012145 Solanum tuberosum HOM05D011491 ORTHO05D009078 2.3e-07 59.7 113 35.4
AUR62019842 Chenopodium quinoa HOM05D007727 ORTHO05D009078 3.0e-07 59.3 104 34.6
Nitab4.5_0002782g0020 Nicotiana tabacum HOM05D011491 ORTHO05D009078 5.1e-07 58.5 44 61.4
Sed0000706 Sechium edule HOM05D007727 ORTHO05D009078 3.3e-06 55.8 111 35.1


User provided reference genes

Program Settings