Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra01G0061000 Salix brachista HOM05D001824 ORTHO05D349754 4.0e-56 221.1 103 100.0
Potri.003G146500 Populus trichocarpa HOM05D001824 ORTHO05D007807 5.1e-11 71.2 126 38.9
Prupe.5G129700 Prunus persica HOM05D001824 ORTHO05D007807 4.3e-10 68.2 113 39.8
MD14G1126700 Malus domestica HOM05D001824 ORTHO05D007807 2.8e-09 65.5 113 39.8
TWI60G0850 Tripterygium wilfordii HOM05D001824 ORTHO05D007807 2.8e-09 65.5 113 39.8
RcHm_v2.0_Chr7g0186911 Rosa chinensis HOM05D001824 ORTHO05D007807 3.6e-09 65.1 128 36.7
VMungo1127G0845 Vigna mungo HOM05D001824 ORTHO05D007807 4.8e-09 64.7 113 38.9
Ca_19615_v3 Cicer arietinum L. HOM05D001824 ORTHO05D007807 6.2e-09 64.3 113 38.1
arahy.Tifrunner.gnm1.ann1.UX12II Arachis hypogaea HOM05D001824 ORTHO05D007807 8.1e-09 63.9 113 38.1
Haze_09175 Corylus avellana HOM05D001824 ORTHO05D007807 1.1e-08 63.5 128 35.9
Phvul.011G016800 Phaseolus vulgaris HOM05D001824 ORTHO05D007807 1.4e-08 63.2 113 38.1
THA.LOC104809304 Tarenaya hassleriana HOM05D001824 ORTHO05D007807 1.4e-08 63.2 113 36.3
arahy.Tifrunner.gnm1.ann1.4R2AWH Arachis hypogaea HOM05D001824 ORTHO05D007807 2.4e-08 62.4 113 37.2
Cfa011924 Carpinus fangiana HOM05D001824 ORTHO05D007807 2.4e-08 62.4 128 35.9
CiPaw.11G112400 Carya illinoinensis HOM05D001824 ORTHO05D007807 2.4e-08 62.4 113 38.1
unitig_22.g5513 Utricularia gibba HOM05D001824 ORTHO05D007807 2.4e-08 62.4 113 36.3
Glyma.12G013800 Glycine max HOM05D001824 ORTHO05D007807 3.1e-08 62.0 113 36.3
Lalb_Chr19g0140111 Lupinus albus HOM05D001824 ORTHO05D007807 3.1e-08 62.0 113 38.1
Dinv12929 Davidia involucrata HOM05D001824 ORTHO05D007807 4.0e-08 61.6 113 37.2
MD06G1118600 Malus domestica HOM05D001824 ORTHO05D007807 4.0e-08 61.6 113 38.1
Actinidia22206 Actinidia chinensis HOM05D001824 ORTHO05D007807 5.3e-08 61.2 113 36.3
CANSAT21G1252 Cannabis sativa HOM05D001824 ORTHO05D007807 5.3e-08 61.2 128 35.2
Medtr0004s0330 Medicago truncatula HOM05D001824 ORTHO05D007807 5.3e-08 61.2 113 36.3
Oeu010739.1 Olea europaea HOM05D001824 ORTHO05D007807 5.3e-08 61.2 128 34.4
CSS0009967 Camellia sinensis var. sinensis HOM05D001824 ORTHO05D007807 6.9e-08 60.8 113 37.2
Psat0s3988g0080 Pisum sativum HOM05D001824 ORTHO05D007807 6.9e-08 60.8 113 36.3
MSTRG.2019 Avicennia marina HOM05D001824 ORTHO05D007807 9.0e-08 60.5 113 35.4
CiPaw.11G112300 Carya illinoinensis HOM05D001824 ORTHO05D007807 9.0e-08 60.5 113 36.3
FvH4_5g10900 Fragaria vesca HOM05D001824 ORTHO05D007807 9.0e-08 60.5 113 37.2
FAN18G4334 Fragaria x ananassa HOM05D001824 ORTHO05D007807 9.0e-08 60.5 113 37.2
CSS0044313 Camellia sinensis var. sinensis HOM05D001824 ORTHO05D007807 1.2e-07 60.1 113 34.5
Ciclev10020407m.g Citrus clementina HOM05D001824 ORTHO05D007807 1.2e-07 60.1 113 35.4
FAN08G1643 Fragaria x ananassa HOM05D001824 ORTHO05D007807 1.2e-07 60.1 113 37.2
Lj3g0001615 Lotus japonicus HOM05D001824 ORTHO05D007807 1.2e-07 60.1 113 36.3
GSVIVG01019651001 Vitis vinifera HOM05D001824 ORTHO05D007807 1.2e-07 60.1 111 36.0
Gohir.A02G098200 Gossypium hirsutum HOM05D001824 ORTHO05D007807 1.5e-07 59.7 128 35.2
Manes.02G003000 Manihot esculenta HOM05D001824 ORTHO05D007807 1.5e-07 59.7 113 34.5
QL02p028147 Quercus lobata HOM05D001824 ORTHO05D007807 1.5e-07 59.7 113 35.4
AUR62007053 Chenopodium quinoa HOM05D001824 ORTHO05D007807 2.6e-07 58.9 128 32.8
Gohir.D03G085400 Gossypium hirsutum HOM05D001824 ORTHO05D007807 2.6e-07 58.9 128 35.2
Gorai.003G076900 Gossypium raimondii HOM05D001824 ORTHO05D007807 2.6e-07 58.9 128 35.2
AUR62019917 Chenopodium quinoa HOM05D001824 ORTHO05D007807 3.4e-07 58.5 128 34.4
Migut.E00630 Erythranthe guttata HOM05D001824 ORTHO05D007807 3.4e-07 58.5 113 35.4
FAN13G2815 Fragaria x ananassa HOM05D001824 ORTHO05D007807 3.4e-07 58.5 113 34.5
Glyma.09G223100 Glycine max HOM05D001824 ORTHO05D007807 5.8e-07 57.8 113 34.5
Eucgr.E01038 Eucalyptus grandis HOM05D001824 ORTHO05D007807 7.6e-07 57.4 112 34.8
Peaxi162Scf00074g00231 Petunia axillaris HOM05D001824 ORTHO05D007807 9.9e-07 57.0 107 35.5
Sp5g11430 Schrenkiella parvula HOM05D001824 ORTHO05D007807 9.9e-07 57.0 113 30.1
Sopen08g031360 Solanum pennellii HOM05D001824 ORTHO05D007807 9.9e-07 57.0 113 36.3
Cc08_g16740 Coffea canephora HOM05D001824 ORTHO05D007807 1.3e-06 56.6 128 35.2
Thhalv10010419m.g Eutrema salsugineum HOM05D001824 ORTHO05D007807 1.3e-06 56.6 113 30.1
Solyc08g083140.4 Solanum lycopersicum HOM05D001824 ORTHO05D007807 1.7e-06 56.2 113 36.3
TAR629G1551 Trochodendron aralioides HOM05D001824 ORTHO05D007807 2.2e-06 55.8 113 35.4
Aa31LG2G1690 Aethionema arabicum HOM05D001824 ORTHO05D007807 2.9e-06 55.5 113 31.9
BcaC07g39541 Brassica carinata HOM05D001824 ORTHO05D007807 2.9e-06 55.5 113 30.1
C08p25940 Brassica napus HOM05D001824 ORTHO05D007807 2.9e-06 55.5 113 30.1
BolC8t50210H Brassica oleracea HOM05D001824 ORTHO05D007807 2.9e-06 55.5 113 30.1
CAN.G567.87 Capsicum annuum HOM05D001824 ORTHO05D007807 2.9e-06 55.5 113 35.4
Cpa.g.sc667.1 Carica papaya HOM05D001824 ORTHO05D007807 2.9e-06 55.5 112 34.8
Lj8A200T58 Lonicera japonica HOM05D001824 ORTHO05D007807 2.9e-06 55.5 111 34.2
Nitab4.5_0004251g0080 Nicotiana tabacum HOM05D001824 ORTHO05D007807 3.8e-06 55.1 113 34.5
Nitab4.5_0007063g0080 Nicotiana tabacum HOM05D001824 ORTHO05D007807 3.8e-06 55.1 113 34.5
CARHR160330 Cardamine hirsuta HOM05D001824 ORTHO05D007807 4.9e-06 54.7 113 30.1
Hund11346 Selenicereus undatus HOM05D001824 ORTHO05D007807 4.9e-06 54.7 128 33.6
Thecc.03G221200 Theobroma cacao HOM05D001824 ORTHO05D007807 4.9e-06 54.7 113 34.5
vmacro11500 Vaccinium macrocarpon HOM05D001824 ORTHO05D007807 4.9e-06 54.7 111 36.0
A09p43840 Brassica napus HOM05D001824 ORTHO05D007807 6.4e-06 54.3 113 30.1
BraA09t39843Z Brassica rapa HOM05D001824 ORTHO05D007807 6.4e-06 54.3 113 30.1
Duzib084G1017 Durio zibethinus HOM05D001824 ORTHO05D007807 6.4e-06 54.3 113 35.4
QL02p028110 Quercus lobata HOM05D001824 ORTHO05D007807 6.4e-06 54.3 109 35.8
CDE02G1387 Ceratophyllum demersum HOM05D001824 ORTHO05D007807 8.4e-06 53.9 128 31.2
Lsat_1_v5_gn_3_14300 Lactuca sativa HOM05D001824 ORTHO05D007807 8.4e-06 53.9 128 30.5
PSO063G2528 Papaver somniferum HOM05D001824 ORTHO05D007807 8.4e-06 53.9 112 34.8
PGR042G0096 Punica granatum HOM05D001824 ORTHO05D007807 8.4e-06 53.9 112 33.9
Rhsim02G0252100 Rhododendron simsii HOM05D001824 ORTHO05D007807 8.4e-06 53.9 111 36.0


User provided reference genes

Program Settings