Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra01G0058900 Salix brachista HOM05D005781 ORTHO05D006835 2.4e-72 275.4 139 100.0
Potri.001G082000 Populus trichocarpa HOM05D005781 ORTHO05D006835 2.0e-42 176.0 86 95.3
Manes.01G244300 Manihot esculenta HOM05D005781 ORTHO05D006835 8.6e-38 160.6 86 86.0
Cpa.g.c32851 Carica papaya HOM05D005781 ORTHO05D006835 1.9e-37 159.5 87 85.1
Manes.02G161400 Manihot esculenta HOM05D005781 ORTHO05D006835 1.6e-36 156.4 86 83.7
Thecc.01G232600 Theobroma cacao HOM05D005781 ORTHO05D006835 8.1e-36 154.1 86 82.6
Atru.chr5.698 Acer truncatum HOM05D005781 ORTHO05D006835 1.1e-35 153.7 87 77.0
COL.COLO4_20773 Corchorus olitorius HOM05D005781 ORTHO05D006835 8.9e-35 150.6 86 81.4
Ciclev10023034m.g Citrus clementina HOM05D005781 ORTHO05D006835 1.2e-34 150.2 86 80.2
Duzib138G0305 Durio zibethinus HOM05D005781 ORTHO05D006835 1.2e-34 150.2 86 80.2
Atru.chr1.3778 Acer truncatum HOM05D005781 ORTHO05D006835 1.5e-34 149.8 86 76.7
COL.COLO4_33816 Corchorus olitorius HOM05D005781 ORTHO05D006835 2.6e-34 149.1 86 79.1
THA.LOC104825391 Tarenaya hassleriana HOM05D005781 ORTHO05D006835 2.6e-34 149.1 86 76.7
Gohir.A07G202100 Gossypium hirsutum HOM05D005781 ORTHO05D006835 7.5e-34 147.5 86 77.9
TWI63G1301 Tripterygium wilfordii HOM05D005781 ORTHO05D006835 7.5e-34 147.5 86 79.1
Gohir.D07G208300 Gossypium hirsutum HOM05D005781 ORTHO05D006835 1.3e-33 146.7 86 79.1
Gorai.001G235000 Gossypium raimondii HOM05D005781 ORTHO05D006835 1.7e-33 146.4 86 77.9
Gohir.A08G193000 Gossypium hirsutum HOM05D005781 ORTHO05D006835 2.2e-33 146.0 86 76.7
Haze_00504 Corylus avellana HOM05D005781 ORTHO05D006835 2.9e-33 145.6 87 79.3
Gorai.009G291400 Gossypium raimondii HOM05D005781 ORTHO05D006835 3.7e-33 145.2 93 72.0
QL04p074672 Quercus lobata HOM05D005781 ORTHO05D006835 3.7e-33 145.2 87 77.0
Cfa011814 Carpinus fangiana HOM05D005781 ORTHO05D006835 4.9e-33 144.8 87 79.3
Gohir.D08G211000 Gossypium hirsutum HOM05D005781 ORTHO05D006835 4.9e-33 144.8 86 76.7
Gorai.004G223700 Gossypium raimondii HOM05D005781 ORTHO05D006835 4.9e-33 144.8 86 76.7
Cfa015971 Carpinus fangiana HOM05D005781 ORTHO05D006835 1.4e-32 143.3 86 79.1
Gohir.D05G278050 Gossypium hirsutum HOM05D005781 ORTHO05D006835 3.2e-32 142.1 93 71.0
CiPaw.06G025900 Carya illinoinensis HOM05D005781 ORTHO05D006835 5.4e-32 141.4 86 80.2
Eucgr.D02385 Eucalyptus grandis HOM05D005781 ORTHO05D006835 5.4e-32 141.4 86 74.4
MD04G1200700 Malus domestica HOM05D005781 ORTHO05D006835 7.1e-32 141.0 86 75.6
PGR031G1812 Punica granatum HOM05D005781 ORTHO05D006835 7.1e-32 141.0 86 76.7
THA.LOC104825885 Tarenaya hassleriana HOM05D005781 ORTHO05D006835 7.1e-32 141.0 93 69.9
MD12G1213200 Malus domestica HOM05D005781 ORTHO05D006835 2.1e-31 139.4 86 74.4
Prupe.6G320800 Prunus persica HOM05D005781 ORTHO05D006835 2.7e-31 139.0 86 75.6
TWI38G0894 Tripterygium wilfordii HOM05D005781 ORTHO05D006835 3.5e-31 138.7 86 75.6
Sed0023332 Sechium edule HOM05D005781 ORTHO05D006835 1.3e-30 136.7 83 74.7
Sed0027756 Sechium edule HOM05D005781 ORTHO05D006835 1.7e-30 136.3 83 74.7
CANSAT54G0055 Cannabis sativa HOM05D005781 ORTHO05D006835 3.9e-30 135.2 85 71.8
Gohir.A05G276166 Gossypium hirsutum HOM05D005781 ORTHO05D006835 6.6e-30 134.4 93 67.7
ClCG05G000700 Citrullus lanatus HOM05D005781 ORTHO05D006835 2.5e-29 132.5 83 73.5
Lj4g0019743 Lotus japonicus HOM05D005781 ORTHO05D006835 3.3e-29 132.1 86 70.9
Hma1.2p1_0841F.1_g227020 Hydrangea macrophylla HOM05D005781 ORTHO05D006835 1.6e-28 129.8 88 72.7
Lj4g0026259 Lotus japonicus HOM05D005781 ORTHO05D006835 1.6e-28 129.8 86 68.6
arahy.Tifrunner.gnm1.ann1.V38LZ0 Arachis hypogaea HOM05D005781 ORTHO05D006835 3.6e-28 128.6 87 69.0
Glyma.08G084500 Glycine max HOM05D005781 ORTHO05D006835 1.1e-27 127.1 86 67.4
arahy.Tifrunner.gnm1.ann1.EVJW84 Arachis hypogaea HOM05D005781 ORTHO05D006835 1.8e-27 126.3 86 68.6
Glyma.05G129800 Glycine max HOM05D005781 ORTHO05D006835 1.8e-27 126.3 86 66.3
Lj3g0001466 Lotus japonicus HOM05D005781 ORTHO05D006835 3.1e-27 125.6 86 67.4
TPR.G40143 Trifolium pratense HOM05D005781 ORTHO05D006835 3.1e-27 125.6 86 65.1
Rhsim06G0009100 Rhododendron simsii HOM05D005781 ORTHO05D006835 1.2e-26 123.6 87 67.8
Lalb_Chr13g0300501 Lupinus albus HOM05D005781 ORTHO05D006835 1.5e-26 123.2 86 67.4
Ca_21653_v3 Cicer arietinum L. HOM05D005781 ORTHO05D006835 2.0e-26 122.9 86 61.6
Rhsim13G0061400 Rhododendron simsii HOM05D005781 ORTHO05D006835 2.0e-26 122.9 87 67.8
vmacro12515 Vaccinium macrocarpon HOM05D005781 ORTHO05D006835 2.6e-26 122.5 91 65.9
Haze_11591 Corylus avellana HOM05D005781 ORTHO05D006835 3.4e-26 122.1 75 77.3
vmacro02893 Vaccinium macrocarpon HOM05D005781 ORTHO05D006835 3.4e-26 122.1 87 67.8
CSS0033648 Camellia sinensis var. sinensis HOM05D005781 ORTHO05D006835 4.4e-26 121.7 87 66.7
Peaxi162Scf00007g01414 Petunia axillaris HOM05D005781 ORTHO05D006835 4.4e-26 121.7 87 63.2
Psat4g033600 Pisum sativum HOM05D005781 ORTHO05D006835 4.4e-26 121.7 86 62.8
MELO3C006010.2 Cucumis melo HOM05D005781 ORTHO05D006835 7.6e-26 120.9 91 64.8
Medtr4g115740 Medicago truncatula HOM05D005781 ORTHO05D006835 9.9e-26 120.6 86 65.1
Medtr5g009535 Medicago truncatula HOM05D005781 ORTHO05D006835 9.9e-26 120.6 86 65.1
RcHm_v2.0_Chr3g0455721 Rosa chinensis HOM05D005781 ORTHO05D006835 1.3e-25 120.2 86 65.1
Dinv12261 Davidia involucrata HOM05D005781 ORTHO05D006835 1.7e-25 119.8 86 66.3
CSS0000543 Camellia sinensis var. sinensis HOM05D005781 ORTHO05D006835 2.9e-25 119.0 87 65.5
Nn8g40131 Nelumbo nucifera HOM05D005781 ORTHO05D006835 6.4e-25 117.9 86 64.0
CsaV3_3G007920 Cucumis sativus L. HOM05D005781 ORTHO05D006835 8.4e-25 117.5 91 62.6
FAN05G5419 Fragaria x ananassa HOM05D006406 ORTHO05D007883 1.1e-24 117.1 86 64.0
FAN09G0731 Fragaria x ananassa HOM05D005781 ORTHO05D006835 1.1e-24 117.1 86 64.0
Nitab4.5_0001134g0180 Nicotiana tabacum HOM05D005781 ORTHO05D006835 1.1e-24 117.1 87 60.9
Nn6g33491 Nelumbo nucifera HOM05D005781 ORTHO05D006835 1.9e-24 116.3 86 64.0
FAN14G3705 Fragaria x ananassa HOM05D006406 ORTHO05D007883 2.4e-24 115.9 86 62.8
Phvul.002G194100 Phaseolus vulgaris HOM05D005781 ORTHO05D006835 2.4e-24 115.9 86 60.5
Nitab4.5_0003429g0070 Nicotiana tabacum HOM05D005781 ORTHO05D006835 3.2e-24 115.5 87 60.9
Cc05_g05310 Coffea canephora HOM05D005781 ORTHO05D006835 7.1e-24 114.4 86 62.8
Atru.chr1.3777 Acer truncatum HOM05D005781 ORTHO05D006835 9.2e-24 114.0 67 76.1
Aqoxy5G00270 Aquilegia oxysepala HOM05D005781 ORTHO05D006835 1.2e-23 113.6 86 60.5
Os01g0258600 Oryza sativa ssp. japonica HOM05D005781 ORTHO05D006835 1.6e-23 113.2 86 60.5
Hund27185 Selenicereus undatus HOM05D005781 ORTHO05D006835 2.1e-23 112.8 88 63.6
Nitab4.5_0008807g0010 Nicotiana tabacum HOM05D005781 ORTHO05D006835 3.5e-23 112.1 86 60.5
Ah.04g154640 Amaranthus hybridus HOM05D005781 ORTHO05D006835 4.6e-23 111.7 88 60.2
Oeu052918.1 Olea europaea HOM05D005781 ORTHO05D006835 2.3e-22 109.4 82 67.1
Os06g0184100 Oryza sativa ssp. japonica HOM05D005781 ORTHO05D006835 2.3e-22 109.4 88 60.2
Zm00001eb109340 Zea mays HOM05D005781 ORTHO05D006835 6.6e-22 107.8 86 57.0
ECA247G2075 Erigeron canadensis HOM05D005781 ORTHO05D006835 8.6e-22 107.5 86 59.3
MBI09_g43998_MAGBIO Magnolia biondii HOM05D005781 ORTHO05D006835 1.1e-21 107.1 86 55.8
Sopen07g026470 Solanum pennellii HOM05D005781 ORTHO05D006835 1.5e-21 106.7 83 65.1
EL10Ac7g17336 Beta vulgaris HOM05D005781 ORTHO05D006835 1.9e-21 106.3 87 62.1
PGSC0003DMG400026192 Solanum tuberosum HOM05D005781 ORTHO05D006835 3.3e-21 105.5 89 57.3
Solyc07g052913.1 Solanum lycopersicum HOM05D005781 ORTHO05D006835 9.6e-21 104.0 81 64.2
Sc01g0002510 Simmondsia chinensis HOM05D005781 ORTHO05D006835 1.6e-20 103.2 86 57.0
Lsat_1_v5_gn_9_14361 Lactuca sativa HOM05D005781 ORTHO05D006835 3.6e-20 102.1 86 58.1
Oeu034339.1 Olea europaea HOM05D005781 ORTHO05D006835 4.7e-20 101.7 82 63.4
Dinv36923 Davidia involucrata HOM05D005781 ORTHO05D006835 6.2e-20 101.3 74 67.6
DCAR_022248 Daucus carota HOM05D005781 ORTHO05D006835 8.1e-20 100.9 86 58.1
DCAR_003312 Daucus carota HOM05D005781 ORTHO05D006835 1.1e-19 100.5 86 55.8
Migut.H01206 Erythranthe guttata HOM05D005781 ORTHO05D006835 3.1e-19 99.0 82 59.8
ATR0626G090 Amborella trichopoda HOM05D005781 ORTHO05D006835 4.0e-19 98.6 96 51.0
CDE02G0151 Ceratophyllum demersum HOM05D005781 ORTHO05D006835 5.2e-19 98.2 86 51.2
RcHm_v2.0_Chr1g0322091 Rosa chinensis HOM05D005781 ORTHO05D006835 5.2e-19 98.2 72 63.9
VMungo0251G3003 Vigna mungo HOM05D005781 ORTHO05D006835 6.8e-19 97.8 75 58.7
Rhsim06G0009300 Rhododendron simsii HOM05D005781 ORTHO05D006835 2.6e-18 95.9 91 56.0
Thhalv10015111m.g Eutrema salsugineum HOM05D005781 ORTHO05D006835 1.7e-17 93.2 88 48.9
Actinidia11611 Actinidia chinensis HOM05D005781 ORTHO05D006835 6.4e-17 91.3 64 70.3
Sp6g27160 Schrenkiella parvula HOM05D005781 ORTHO05D006835 3.2e-16 89.0 89 49.4
Thhalv10022933m.g Eutrema salsugineum HOM05D005781 ORTHO05D006835 9.3e-16 87.4 90 51.1
BcaB07g31735 Brassica carinata HOM05D005781 ORTHO05D006835 1.2e-15 87.0 88 47.7
SGA_v2.0_scaffold57G20299 Striga asiatica HOM05D005781 ORTHO05D006835 3.5e-15 85.5 86 46.5
BolC3t13430H Brassica oleracea HOM05D005781 ORTHO05D006835 4.6e-15 85.1 93 45.2
CARHR196210 Cardamine hirsuta HOM05D005781 ORTHO05D006835 1.3e-14 83.6 90 48.9
A03p08090 Brassica napus HOM05D005781 ORTHO05D006835 2.3e-14 82.8 93 45.2
BcaB01g04964 Brassica carinata HOM05D005781 ORTHO05D006835 3.0e-14 82.4 90 45.6
A09p11320 Brassica napus HOM05D005781 ORTHO05D006835 3.9e-14 82.0 92 45.7
BraA09t36770Z Brassica rapa HOM05D005781 ORTHO05D006835 3.9e-14 82.0 92 45.7
Zm00001eb374690 Zea mays HOM05D005781 ORTHO05D006835 3.9e-14 82.0 57 63.2
unitig_0.g2200 Utricularia gibba HOM05D005781 ORTHO05D006835 5.1e-14 81.6 71 54.9
AL6G27950 Arabidopsis lyrata HOM05D005781 ORTHO05D006835 6.6e-14 81.3 91 44.0
AT5G16950 Arabidopsis thaliana HOM05D005781 ORTHO05D006835 6.6e-14 81.3 88 42.0
BraA03t10134Z Brassica rapa HOM05D005781 ORTHO05D006835 6.6e-14 81.3 92 44.6
SalBow1G0213 Salvia bowleyana HOM05D005781 ORTHO05D006835 8.7e-14 80.9 91 46.2
SalBow1G0716 Salvia bowleyana HOM05D005781 ORTHO05D006835 2.5e-13 79.3 88 46.6
Carub.0006s1516 Capsella rubella HOM05D005781 ORTHO05D006835 7.3e-13 77.8 92 43.5
Aa31LG11G12650 Aethionema arabicum HOM05D005781 ORTHO05D006835 1.6e-12 76.6 93 47.3
BcaB01g05237 Brassica carinata HOM05D005781 ORTHO05D006835 2.1e-12 76.3 95 41.1
C03p09360 Brassica napus HOM05D005781 ORTHO05D006835 3.6e-12 75.5 97 40.2
HanXRQChr08g0228461 Helianthus annuus HOM05D005781 ORTHO05D006835 9.0e-11 70.9 45 66.7
RcHm_v2.0_Chr1g0326231 Rosa chinensis HOM05D005781 ORTHO05D006835 1.5e-10 70.1 70 52.9
Zm00001eb217150 Zea mays HOM05D000360 ORTHO05D006835 1.5e-10 70.1 55 56.4
Zm00001eb352440 Zea mays HOM05D000360 ORTHO05D006835 9.9e-10 67.4 55 54.5
BcaC04g22979 Brassica carinata HOM05D005781 ORTHO05D006835 2.2e-09 66.2 53 50.9
C09p13330 Brassica napus HOM05D005781 ORTHO05D006835 1.4e-08 63.5 77 39.0
BolC9t54226H Brassica oleracea HOM05D005781 ORTHO05D006835 1.4e-08 63.5 77 39.0
Lalb_Chr07g0188641 Lupinus albus HOM05D005781 ORTHO05D006835 3.2e-08 62.4 51 56.9
BcaB01g05235 Brassica carinata HOM05D005781 ORTHO05D006835 1.6e-07 60.1 41 63.4
Pp3c9_710 Physcomitrium patens HOM05D005781 ORTHO05D006835 4.6e-07 58.5 65 44.6
Mapoly0010s0158 Marchantia polymorpha HOM05D005781 ORTHO05D006835 2.3e-06 56.2 56 46.4


User provided reference genes

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