Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra01G0056700 Salix brachista HOM05D006663 ORTHO05D008269 2.9e-276 954.5 459 100.0
Potri.001G079100 Populus trichocarpa HOM05D006663 ORTHO05D008269 1.3e-263 912.5 459 95.4
Potri.003G151400 Populus trichocarpa HOM05D006663 ORTHO05D008269 5.9e-261 903.7 459 92.2
Sabra03G0109600 Salix brachista HOM05D006663 ORTHO05D008269 1.5e-256 889.0 481 87.7
GSVIVG01013975001 Vitis vinifera HOM05D006663 ORTHO05D008269 7.5e-248 860.1 459 86.5
COL.COLO4_37343 Corchorus olitorius HOM05D006663 ORTHO05D008269 1.3e-247 859.4 459 87.1
Manes.14G038500 Manihot esculenta HOM05D006663 ORTHO05D008269 2.9e-247 858.2 459 87.8
Cpa.g.sc13.257 Carica papaya HOM05D006663 ORTHO05D008269 7.0e-246 853.6 459 86.1
Thecc.03G149200 Theobroma cacao HOM05D006663 ORTHO05D008269 2.7e-245 851.7 459 86.5
TWI39G0071 Tripterygium wilfordii HOM05D006663 ORTHO05D008269 1.7e-244 849.0 459 85.2
Atru.chr1.907 Acer truncatum HOM05D006663 ORTHO05D008269 6.6e-244 847.0 460 85.9
Gorai.008G214300 Gossypium raimondii HOM05D006663 ORTHO05D008269 4.3e-243 844.3 459 86.1
Gohir.A12G196700 Gossypium hirsutum HOM05D006663 ORTHO05D008269 1.2e-242 842.8 459 85.6
ClCG01G004680 Citrullus lanatus HOM05D006663 ORTHO05D008269 2.1e-242 842.0 459 83.9
Hma1.2p1_1580F.1_g291900 Hydrangea macrophylla HOM05D006663 ORTHO05D008269 2.8e-242 841.6 459 85.4
CANSAT56G2550 Cannabis sativa HOM05D006663 ORTHO05D008269 3.6e-242 841.3 460 85.7
QL09p027994 Quercus lobata HOM05D006663 ORTHO05D008269 1.1e-241 839.7 475 82.5
Sed0007931 Sechium edule HOM05D006663 ORTHO05D008269 1.1e-241 839.7 459 84.3
CiPaw.07G185300 Carya illinoinensis HOM05D006663 ORTHO05D008269 2.3e-241 838.6 461 85.7
Lj5g0020638 Lotus japonicus HOM05D006663 ORTHO05D008269 2.3e-241 838.6 459 85.0
arahy.Tifrunner.gnm1.ann1.JS0B2B Arachis hypogaea HOM05D006663 ORTHO05D008269 6.8e-241 837.0 459 85.0
Actinidia13608 Actinidia chinensis HOM05D006663 ORTHO05D008269 1.5e-240 835.9 460 84.1
MD07G1249200 Malus domestica HOM05D006663 ORTHO05D008269 2.0e-240 835.5 460 85.4
FvH4_7g26970 Fragaria vesca HOM05D006663 ORTHO05D008269 2.6e-240 835.1 460 85.4
arahy.Tifrunner.gnm1.ann1.78X8E3 Arachis hypogaea HOM05D006663 ORTHO05D008269 3.4e-240 834.7 459 84.5
VMungo0720G2856 Vigna mungo HOM05D006663 ORTHO05D008269 2.2e-239 832.0 459 84.3
Glyma.20G195600 Glycine max HOM05D006663 ORTHO05D008269 3.7e-239 831.2 459 84.3
FAN06G2606 Fragaria x ananassa HOM05D006663 ORTHO05D008269 6.4e-239 830.5 461 85.2
Phvul.007G136100 Phaseolus vulgaris HOM05D006663 ORTHO05D008269 1.1e-238 829.7 459 84.7
TAR636G2266 Trochodendron aralioides HOM05D006663 ORTHO05D008269 1.9e-238 828.9 460 83.0
Lalb_Chr02g0150831 Lupinus albus HOM05D006663 ORTHO05D008269 2.4e-238 828.6 459 84.5
CANSAT56G3894 Cannabis sativa HOM05D006663 ORTHO05D008269 7.1e-238 827.0 459 84.1
FAN06G1593 Fragaria x ananassa HOM05D006663 ORTHO05D008269 9.2e-238 826.6 461 85.0
RcHm_v2.0_Chr1g0373701 Rosa chinensis HOM05D006663 ORTHO05D008269 9.2e-238 826.6 461 84.8
Eucgr.A02922 Eucalyptus grandis HOM05D006663 ORTHO05D008269 2.1e-237 825.5 461 83.9
Rhsim03G0161500 Rhododendron simsii HOM05D006663 ORTHO05D008269 2.1e-237 825.5 460 82.8
MD01G1177500 Malus domestica HOM05D006663 ORTHO05D008269 2.7e-237 825.1 461 84.8
CsaV3_5G004880 Cucumis sativus L. HOM05D006663 ORTHO05D008269 1.1e-235 819.7 459 81.9
MELO3C005467.2 Cucumis melo HOM05D006663 ORTHO05D008269 1.6e-234 815.8 459 81.5
CSS0030206 Camellia sinensis var. sinensis HOM05D006663 ORTHO05D008269 1.4e-233 812.8 460 82.6
CSS0049195 Camellia sinensis var. sinensis HOM05D006663 ORTHO05D008269 1.4e-233 812.8 460 82.6
Aqoxy7G00844 Aquilegia oxysepala HOM05D006663 ORTHO05D008269 4.0e-233 811.2 460 81.1
C09p69700 Brassica napus HOM05D006663 ORTHO05D008269 8.9e-233 810.1 459 80.4
BolC9t59713H Brassica oleracea HOM05D006663 ORTHO05D008269 8.9e-233 810.1 459 80.4
Psat0s1505g0040 Pisum sativum HOM05D006663 ORTHO05D008269 8.9e-233 810.1 459 81.7
Medtr1g090310 Medicago truncatula HOM05D006663 ORTHO05D008269 3.4e-232 808.1 459 81.5
Thhalv10013487m.g Eutrema salsugineum HOM05D006663 ORTHO05D008269 4.4e-232 807.7 459 81.5
Carub.0006s0657 Capsella rubella HOM05D006663 ORTHO05D008269 9.9e-232 806.6 459 81.0
AL6G17900 Arabidopsis lyrata HOM05D006663 ORTHO05D008269 1.7e-231 805.8 459 81.0
AT5G07590 Arabidopsis thaliana HOM05D006663 ORTHO05D008269 1.7e-231 805.8 459 81.3
A10p29330 Brassica napus HOM05D006663 ORTHO05D008269 1.7e-231 805.8 459 80.2
Sc10g0004730 Simmondsia chinensis HOM05D006663 ORTHO05D008269 2.2e-231 805.4 460 80.7
THA.LOC104801603 Tarenaya hassleriana HOM05D006663 ORTHO05D008269 2.9e-231 805.1 460 79.6
Oeu042534.1 Olea europaea HOM05D006663 ORTHO05D008269 3.7e-231 804.7 460 80.4
BcaC06g32493 Brassica carinata HOM05D006663 ORTHO05D008269 1.1e-230 803.1 459 79.7
CARHR205560 Cardamine hirsuta HOM05D006663 ORTHO05D008269 1.4e-230 802.7 459 80.8
Ciclev10004937m.g Citrus clementina HOM05D006663 ORTHO05D008269 1.4e-230 802.7 459 83.9
Sp6g35280 Schrenkiella parvula HOM05D006663 ORTHO05D008269 2.4e-230 802.0 459 81.7
Lj1C976T20 Lonicera japonica HOM05D006663 ORTHO05D008269 5.4e-230 800.8 460 80.7
MSTRG.8846 Avicennia marina HOM05D006663 ORTHO05D008269 2.1e-229 798.9 460 80.2
HanXRQChr05g0138181 Helianthus annuus HOM05D006663 ORTHO05D008269 5.6e-227 790.8 461 79.4
Aa31LG3G18830 Aethionema arabicum HOM05D006663 ORTHO05D008269 2.8e-226 788.5 486 76.5
Cc02_g04690 Coffea canephora HOM05D006663 ORTHO05D008269 1.5e-224 782.7 460 80.4
PGSC0003DMG400010747 Solanum tuberosum HOM05D006663 ORTHO05D008269 2.0e-224 782.3 460 81.7
Migut.F00523 Erythranthe guttata HOM05D006663 ORTHO05D008269 4.4e-224 781.2 460 78.5
Sopen03g024320 Solanum pennellii HOM05D006663 ORTHO05D008269 4.4e-224 781.2 460 82.0
ECA233G2092 Erigeron canadensis HOM05D006663 ORTHO05D008269 9.9e-224 780.0 458 79.0
Lsat_1_v5_gn_8_9600 Lactuca sativa HOM05D006663 ORTHO05D008269 1.1e-222 776.5 461 78.7
TPR.G13385 Trifolium pratense HOM05D006663 ORTHO05D008269 4.2e-222 774.6 497 74.2
DCAR_020172 Daucus carota HOM05D006663 ORTHO05D008269 2.1e-221 772.3 459 78.2
ATR0057G058 Amborella trichopoda HOM05D006663 ORTHO05D008269 7.8e-221 770.4 462 76.2
SGA_v2.0_scaffold60G20812 Striga asiatica HOM05D006663 ORTHO05D008269 5.1e-220 767.7 460 77.6
PSO675G3877 Papaver somniferum HOM05D006663 ORTHO05D008269 8.7e-220 766.9 447 78.7
Prupe.2G272800 Prunus persica HOM05D006663 ORTHO05D008269 1.5e-219 766.1 459 79.7
PSO732G0765 Papaver somniferum HOM05D006663 ORTHO05D008269 7.3e-219 763.8 443 79.0
Hund24931 Selenicereus undatus HOM05D006663 ORTHO05D008269 6.9e-217 757.3 458 76.2
Glyma.10G194400 Glycine max HOM05D006663 ORTHO05D008269 7.6e-216 753.8 459 77.8
EL10Ac7g15901 Beta vulgaris HOM05D006663 ORTHO05D008269 1.1e-214 750.0 459 75.2
AUR62009686 Chenopodium quinoa HOM05D006663 ORTHO05D008269 1.9e-214 749.2 459 77.1
Os10g0563300 Oryza sativa ssp. japonica HOM05D006663 ORTHO05D008269 6.2e-210 734.2 464 74.1
Nn1g00884 Nelumbo nucifera HOM05D006663 ORTHO05D008269 2.0e-208 729.2 460 75.2
SEGI_30026 Sequoiadendron giganteum HOM05D006663 ORTHO05D008269 4.0e-201 704.9 452 71.7
AUR62001890 Chenopodium quinoa HOM05D006663 ORTHO05D008269 3.2e-198 695.3 459 70.8
SHI14080 Sapria himalayana HOM05D006663 ORTHO05D008269 7.1e-198 694.1 498 68.1
PGR042G0458 Punica granatum HOM05D006663 ORTHO05D008269 2.5e-187 659.1 458 70.3
SMO340G0268 Selaginella moellendorffii HOM05D006663 ORTHO05D008269 3.1e-185 652.1 455 67.5
HPP92_025692 Vanilla planifolia HOM05D006663 ORTHO05D008269 4.8e-178 628.2 393 73.5
Pp3c9_7850 Physcomitrium patens HOM05D006663 ORTHO05D008269 1.4e-177 626.7 465 63.9
Pp3c13_8720 Physcomitrium patens HOM05D006663 ORTHO05D008269 4.1e-177 625.2 458 61.8
Pp3c3_11450 Physcomitrium patens HOM05D006663 ORTHO05D008269 6.5e-175 617.8 458 61.4
FAN10G3253 Fragaria x ananassa HOM05D006663 ORTHO05D008269 2.7e-173 612.5 338 85.5
Ca_10369_v3 Cicer arietinum L. HOM05D006663 ORTHO05D008269 4.7e-173 611.7 341 83.9
Ca_10419_v3 Cicer arietinum L. HOM05D006663 ORTHO05D008269 4.7e-173 611.7 341 83.9
Haze_22195 Corylus avellana HOM05D006663 ORTHO05D008269 4.7e-173 611.7 340 83.5
Mapoly0178s0015 Marchantia polymorpha HOM05D006663 ORTHO05D008269 3.9e-172 608.6 458 62.0
Gohir.A09G080000 Gossypium hirsutum HOM05D006663 ORTHO05D008269 6.7e-172 607.8 338 83.7
Gohir.D09G034800 Gossypium hirsutum HOM05D006663 ORTHO05D008269 2.6e-171 605.9 338 83.7
FAN03G0477 Fragaria x ananassa HOM05D006663 ORTHO05D008269 1.8e-169 599.7 338 84.3
vmacro06835 Vaccinium macrocarpon HOM05D006663 ORTHO05D008269 7.2e-166 587.8 338 82.5
Dinv06596 Davidia involucrata HOM05D006663 ORTHO05D008269 6.3e-162 574.7 323 83.3
Nitab4.5_0007080g0010 Nicotiana tabacum HOM05D006663 ORTHO05D008269 8.2e-162 574.3 337 81.9
SalBow3G3051 Salvia bowleyana HOM05D006663 ORTHO05D008269 4.1e-161 572.0 337 78.9
CBR_g49329 Chara braunii HOM05D006663 ORTHO05D008269 6.1e-157 558.1 450 57.3
Gohir.D04G037700 Gossypium hirsutum HOM05D006663 ORTHO05D008269 3.0e-156 555.8 299 86.0
Gohir.D12G199100 Gossypium hirsutum HOM05D006663 ORTHO05D008269 1.5e-150 537.0 290 86.9
Nitab4.5_0021979g0010 Nicotiana tabacum HOM05D006663 ORTHO05D008269 2.6e-147 526.2 300 84.3
Peaxi162Scf00271g00618 Petunia axillaris HOM05D006663 ORTHO05D008269 5.9e-144 515.0 337 76.6
Solyc03g093490.3 Solanum lycopersicum HOM05D006663 ORTHO05D008269 2.3e-143 513.1 300 83.3
SalBow3G2644 Salvia bowleyana HOM05D006663 ORTHO05D008269 1.3e-138 497.3 291 79.4
AagrBONN_evm.TU.Sc2ySwM_228.1080 Anthoceros agrestis HOM05D006663 ORTHO05D008269 4.4e-131 472.2 338 64.5
Zm00001eb325360 Zea mays HOM05D006663 ORTHO05D008269 5.4e-129 465.3 277 75.5
CDE09G0338 Ceratophyllum demersum HOM05D006663 ORTHO05D008269 3.7e-122 442.6 280 73.2
PRCOL_00004773 Prasinoderma coloniale HOM05D006663 ORTHO05D008269 3.1e-100 369.8 449 39.0
Cre13.g567150 Chlamydomonas reinhardtii HOM05D006663 ORTHO05D008269 5.8e-91 339.0 484 36.4
Solyc03g093500.3 Solanum lycopersicum HOM05D006663 ORTHO05D008269 5.5e-73 279.3 168 76.2
SHI00707 Sapria himalayana HOM05D006663 ORTHO05D008269 1.3e-50 204.9 163 61.3
Gohir.A03G137100 Gossypium hirsutum HOM05D006663 ORTHO05D008269 1.8e-47 194.5 110 82.7
Gohir.A07G166700 Gossypium hirsutum HOM05D006663 ORTHO05D008269 1.8e-47 194.5 110 82.7
Gohir.A09G003500 Gossypium hirsutum HOM05D006663 ORTHO05D008269 4.0e-47 193.4 110 81.8
Atru.chr4.2082 Acer truncatum HOM05D006663 ORTHO05D008269 1.6e-43 181.4 106 80.2
BcaC06g32421 Brassica carinata HOM05D006663 ORTHO05D008269 5.4e-12 76.6 40 85.0


User provided reference genes

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