Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra01G0055400 Salix brachista HOM05D006944 ORTHO05D009910 9.3e-66 253.4 133 100.0
Potri.001G078200 Populus trichocarpa HOM05D006944 ORTHO05D009910 2.6e-36 155.6 110 81.8
Duzib213G0640 Durio zibethinus HOM05D006944 ORTHO05D009910 8.9e-16 87.4 103 47.6
Sabra01G0101600 Salix brachista HOM05D006944 ORTHO05D009910 8.9e-16 87.4 123 43.1
Sabra03G0069600 Salix brachista HOM05D006944 ORTHO05D009910 3.4e-15 85.5 98 52.0
COL.COLO4_32286 Corchorus olitorius HOM05D006944 ORTHO05D009910 5.7e-15 84.7 83 51.8
Potri.003G152500 Populus trichocarpa HOM05D006944 ORTHO05D050487 5.7e-15 84.7 110 48.2
TWI38G1618 Tripterygium wilfordii HOM05D010260 ORTHO05D009910 7.5e-15 84.3 108 40.7
Thecc.07G172800 Theobroma cacao HOM05D006944 ORTHO05D009910 1.3e-14 83.6 90 48.9
Gohir.A13G124500 Gossypium hirsutum HOM05D006944 ORTHO05D009910 1.7e-14 83.2 83 53.0
TWI38G0421 Tripterygium wilfordii HOM05D010260 ORTHO05D009910 1.7e-14 83.2 99 47.5
Thecc.05G142700 Theobroma cacao HOM05D006944 ORTHO05D009910 2.2e-14 82.8 97 46.4
Thecc.07G173400 Theobroma cacao HOM05D006944 ORTHO05D009910 2.8e-14 82.4 101 46.5
TWI38G1226 Tripterygium wilfordii HOM05D010260 ORTHO05D009910 2.8e-14 82.4 99 44.4
Potri.003G152100 Populus trichocarpa HOM05D011228 ORTHO05D015182 4.9e-14 81.6 98 46.9
Duzib093G0469 Durio zibethinus HOM05D006944 ORTHO05D035085 6.3e-14 81.3 115 43.5
Duzib213G0044 Durio zibethinus HOM05D006944 ORTHO05D009910 1.4e-13 80.1 114 41.2
TWI38G0902 Tripterygium wilfordii HOM05D010260 ORTHO05D009910 1.4e-13 80.1 117 44.4
Duzib187G0489 Durio zibethinus HOM05D006944 ORTHO05D009910 2.4e-13 79.3 109 42.2
Potri.001G077280 Populus trichocarpa HOM05D006944 ORTHO05D050581 4.1e-13 78.6 114 45.6
Sabra01G0055100 Salix brachista HOM05D006944 ORTHO05D050581 4.1e-13 78.6 112 45.5
Duzib187G0307 Durio zibethinus HOM05D006944 ORTHO05D009910 5.4e-13 78.2 104 43.3
Duzib213G0882 Durio zibethinus HOM05D006944 ORTHO05D009910 7.0e-13 77.8 104 43.3
COL.COLO4_32294 Corchorus olitorius HOM05D006944 ORTHO05D009910 1.2e-12 77.0 78 52.6
Duzib213G0468 Durio zibethinus HOM05D006944 ORTHO05D009910 3.5e-12 75.5 100 41.0
TWI15G0253 Tripterygium wilfordii HOM05D010260 ORTHO05D009910 3.5e-12 75.5 102 43.1
Duzib052G0351 Durio zibethinus HOM05D006944 ORTHO05D013071 5.9e-12 74.7 101 42.6
Gorai.013G143700 Gossypium raimondii HOM05D006944 ORTHO05D009910 5.9e-12 74.7 83 45.8
Thecc.K0001700 Theobroma cacao HOM05D006944 ORTHO05D009910 5.9e-12 74.7 87 46.0
Potri.003G101900 Populus trichocarpa HOM05D006944 ORTHO05D009910 7.8e-12 74.3 102 41.2
Potri.003G102000 Populus trichocarpa HOM05D006944 ORTHO05D009910 1.3e-11 73.6 102 41.2
Gohir.D13G128233 Gossypium hirsutum HOM05D006944 ORTHO05D009910 2.3e-11 72.8 82 45.1
Sabra03G0111300 Salix brachista HOM05D006944 ORTHO05D009910 2.3e-11 72.8 87 48.3
Thecc.05G191200 Theobroma cacao HOM05D006944 ORTHO05D035094 2.3e-11 72.8 84 48.8
TWI38G2111 Tripterygium wilfordii HOM05D010260 ORTHO05D009910 5.0e-11 71.6 107 42.1
Sabra03G0111100 Salix brachista HOM05D006944 ORTHO05D009910 1.5e-10 70.1 95 42.1
Thecc.02G266200 Theobroma cacao HOM05D011192 ORTHO05D015638 1.5e-10 70.1 94 40.4
Thecc.05G191600 Theobroma cacao HOM05D006944 ORTHO05D009910 1.5e-10 70.1 92 44.6
Thecc.07G173000 Theobroma cacao HOM05D006944 ORTHO05D009910 1.5e-10 70.1 87 44.8
Gorai.004G269200 Gossypium raimondii HOM05D006944 ORTHO05D009910 2.5e-10 69.3 89 41.6
COL.COLO4_32290 Corchorus olitorius HOM05D006944 ORTHO05D009910 3.3e-10 68.9 82 43.9
Gohir.A08G232050 Gossypium hirsutum HOM05D006944 ORTHO05D009910 3.3e-10 68.9 87 41.4
Gohir.A08G232200 Gossypium hirsutum HOM05D006944 ORTHO05D009910 3.3e-10 68.9 92 41.3
Gohir.D08G252466 Gossypium hirsutum HOM05D006944 ORTHO05D009910 3.3e-10 68.9 87 41.4
Gohir.A03G217500 Gossypium hirsutum HOM05D006944 ORTHO05D036044 4.3e-10 68.6 104 34.6
Gohir.A13G125001 Gossypium hirsutum HOM05D006944 ORTHO05D009910 4.3e-10 68.6 100 40.0
Thecc.05G142800 Theobroma cacao HOM05D006944 ORTHO05D035085 7.3e-10 67.8 104 41.3
Gohir.D13G128600 Gossypium hirsutum HOM05D006944 ORTHO05D046837 9.5e-10 67.4 100 39.0
TWI15G1222 Tripterygium wilfordii HOM05D010260 ORTHO05D009910 9.5e-10 67.4 114 40.4
TWI63G0374 Tripterygium wilfordii HOM05D010260 ORTHO05D009910 9.5e-10 67.4 97 38.1
Duzib138G0371 Durio zibethinus HOM05D011192 ORTHO05D015638 2.1e-09 66.2 97 41.2
Gorai.013G144700 Gossypium raimondii HOM05D006944 ORTHO05D046837 2.1e-09 66.2 100 39.0
Duzib187G0900 Durio zibethinus HOM05D006944 ORTHO05D009910 2.8e-09 65.9 94 40.4
Duzib128G1252 Durio zibethinus HOM05D006944 ORTHO05D186093 3.6e-09 65.5 58 58.6
Gorai.005G267800 Gossypium raimondii HOM05D006944 ORTHO05D036044 4.7e-09 65.1 112 33.0
Sabra03G0110700 Salix brachista HOM05D006944 ORTHO05D050487 4.7e-09 65.1 112 42.0
COL.COLO4_32292 Corchorus olitorius HOM05D006944 ORTHO05D009910 8.0e-09 64.3 66 47.0
TWI38G0458 Tripterygium wilfordii HOM05D010260 ORTHO05D009910 8.0e-09 64.3 97 37.1
TWI38G0857 Tripterygium wilfordii HOM05D010260 ORTHO05D009910 8.0e-09 64.3 107 37.4
TWI63G0079 Tripterygium wilfordii HOM05D029604 ORTHO05D030703 8.0e-09 64.3 91 36.3
TWI63G1346 Tripterygium wilfordii HOM05D029604 ORTHO05D030703 8.0e-09 64.3 91 37.4
TWI18G0941 Tripterygium wilfordii HOM05D010260 ORTHO05D008529 1.8e-08 63.2 115 41.7
Gohir.A01G098051 Gossypium hirsutum HOM05D006944 ORTHO05D009910 3.1e-08 62.4 90 44.4
Gorai.001G236600 Gossypium raimondii HOM05D011192 ORTHO05D015638 3.1e-08 62.4 103 38.8
Thecc.07G175700 Theobroma cacao HOM05D006944 ORTHO05D009910 3.1e-08 62.4 103 38.8
TWI15G0074 Tripterygium wilfordii HOM05D010260 ORTHO05D009910 3.1e-08 62.4 102 38.2
TWI38G0611 Tripterygium wilfordii HOM05D010260 ORTHO05D009910 3.1e-08 62.4 91 40.7
COL.COLO4_32287 Corchorus olitorius HOM05D006944 ORTHO05D009910 4.0e-08 62.0 56 58.9
Duzib032G0001 Durio zibethinus HOM05D006944 ORTHO05D035094 5.2e-08 61.6 90 44.4
Duzib128G1158 Durio zibethinus HOM05D006944 ORTHO05D035094 5.2e-08 61.6 90 44.4
Gohir.D02G239500 Gossypium hirsutum HOM05D006944 ORTHO05D009910 5.2e-08 61.6 96 33.3
Gohir.D07G209600 Gossypium hirsutum HOM05D011192 ORTHO05D015638 6.8e-08 61.2 103 37.9
Thecc.07G164100 Theobroma cacao HOM05D006944 ORTHO05D045182 8.9e-08 60.8 62 50.0
Gohir.A07G203400 Gossypium hirsutum HOM05D011192 ORTHO05D015638 1.2e-07 60.5 101 38.6
Thecc.07G175800 Theobroma cacao HOM05D006944 ORTHO05D009910 1.2e-07 60.5 63 50.8
Gohir.A01G098001 Gossypium hirsutum HOM05D006944 ORTHO05D009910 1.5e-07 60.1 102 36.3
Duzib213G1066 Durio zibethinus HOM05D006944 ORTHO05D009910 2.0e-07 59.7 56 53.6
Thecc.07G175300 Theobroma cacao HOM05D006944 ORTHO05D009910 2.0e-07 59.7 56 53.6
TWI38G1678 Tripterygium wilfordii HOM05D010260 ORTHO05D009910 2.0e-07 59.7 111 38.7
Gorai.005G267700 Gossypium raimondii HOM05D006944 ORTHO05D009910 3.4e-07 58.9 108 34.3
Duzib213G0885 Durio zibethinus HOM05D006944 ORTHO05D186234 5.8e-07 58.2 58 51.7
Thecc.05G191800 Theobroma cacao HOM05D006944 ORTHO05D407174 5.8e-07 58.2 103 35.9
COL.COLO4_03335 Corchorus olitorius HOM05D006944 ORTHO05D009910 7.5e-07 57.8 52 53.8
Potri.001G131500 Populus trichocarpa HOM05D006944 ORTHO05D009910 7.5e-07 57.8 123 35.8
TWI15G0784 Tripterygium wilfordii HOM05D006944 ORTHO05D030703 7.5e-07 57.8 86 37.2
Gohir.D02G239400 Gossypium hirsutum HOM05D006944 ORTHO05D036044 9.8e-07 57.4 112 32.1
Gorai.002G108000 Gossypium raimondii HOM05D006944 ORTHO05D009910 1.3e-06 57.0 98 34.7
Gohir.D13G128401 Gossypium hirsutum HOM05D006944 ORTHO05D048132 1.7e-06 56.6 90 34.4
Gohir.A13G124825 Gossypium hirsutum HOM05D006944 ORTHO05D009910 2.2e-06 56.2 94 31.9
Gohir.D07G209633 Gossypium hirsutum HOM05D011192 ORTHO05D015638 2.9e-06 55.8 87 37.9
Gorai.001G236700 Gossypium raimondii HOM05D011192 ORTHO05D015638 2.9e-06 55.8 87 37.9
Gorai.001G236800 Gossypium raimondii HOM05D011192 ORTHO05D015638 2.9e-06 55.8 87 37.9
TWI38G0077 Tripterygium wilfordii HOM05D010260 ORTHO05D009910 2.9e-06 55.8 97 35.1
Duzib187G1015 Durio zibethinus HOM05D006944 ORTHO05D013071 3.7e-06 55.5 115 31.3
Gohir.A07G203500 Gossypium hirsutum HOM05D011192 ORTHO05D015638 3.7e-06 55.5 87 37.9
Gohir.D13G128501 Gossypium hirsutum HOM05D006944 ORTHO05D048163 3.7e-06 55.5 102 34.3
Gorai.013G144500 Gossypium raimondii HOM05D006944 ORTHO05D048163 6.4e-06 54.7 102 33.3
Thecc.07G174200 Theobroma cacao HOM05D011997 ORTHO05D015628 6.4e-06 54.7 59 49.2
Thecc.07G174400 Theobroma cacao HOM05D011997 ORTHO05D015628 6.4e-06 54.7 59 49.2
Thecc.07G174600 Theobroma cacao HOM05D011997 ORTHO05D015628 6.4e-06 54.7 59 49.2
Duzib268G0833 Durio zibethinus HOM05D006944 ORTHO05D009910 8.3e-06 54.3 104 36.5
Sabra03G0069700 Salix brachista HOM05D014998 ORTHO05D018092 8.3e-06 54.3 107 36.4


User provided reference genes

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