Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra01G0052200 Salix brachista HOM05D005256 ORTHO05D006491 9.6e-75 283.9 198 100.0
Potri.001G073900 Populus trichocarpa HOM05D005256 ORTHO05D006491 2.3e-68 262.7 150 94.0
Sabra03G0114000 Salix brachista HOM05D005256 ORTHO05D006491 1.3e-66 256.9 149 92.6
Potri.003G157100 Populus trichocarpa HOM05D005256 ORTHO05D006491 2.6e-64 249.2 202 82.2
Glyma.09G047200 Glycine max HOM05D005256 ORTHO05D006491 3.2e-54 215.7 148 79.1
Glyma.15G154700 Glycine max HOM05D005256 ORTHO05D006491 3.2e-54 215.7 149 78.5
Rhsim13G0136300 Rhododendron simsii HOM05D005256 ORTHO05D006491 1.3e-52 210.3 149 74.5
CSS0021462 Camellia sinensis var. sinensis HOM05D005256 ORTHO05D006491 1.8e-52 209.9 141 78.0
Atru.chr10.203 Acer truncatum HOM05D005256 ORTHO05D006491 6.7e-52 208.0 152 74.3
TWI63G0333 Tripterygium wilfordii HOM05D005256 ORTHO05D006491 1.1e-51 207.2 148 73.6
Manes.16G060225 Manihot esculenta HOM05D005256 ORTHO05D006491 7.4e-51 204.5 133 80.5
Nn1g09867 Nelumbo nucifera HOM05D005256 ORTHO05D006491 1.6e-50 203.4 146 74.0
Lj6g0014214 Lotus japonicus HOM05D005256 ORTHO05D006491 2.2e-50 203.0 147 76.2
Hma1.2p1_0082F.1_g042560 Hydrangea macrophylla HOM05D005256 ORTHO05D006491 2.8e-50 202.6 142 73.2
vmacro03574 Vaccinium macrocarpon HOM05D005256 ORTHO05D006491 3.7e-50 202.2 139 77.0
Dinv07938 Davidia involucrata HOM05D005256 ORTHO05D006491 4.8e-50 201.8 140 77.1
Dinv18415 Davidia involucrata HOM05D005256 ORTHO05D006491 4.8e-50 201.8 140 77.1
EL10Ac7g17298 Beta vulgaris HOM05D005256 ORTHO05D006491 8.2e-50 201.1 149 71.1
Medtr2g437530 Medicago truncatula HOM05D005256 ORTHO05D006491 8.2e-50 201.1 149 73.2
TAR624G1249 Trochodendron aralioides HOM05D005256 ORTHO05D006491 1.1e-49 200.7 148 73.0
TPR.G31382 Trifolium pratense HOM05D005256 ORTHO05D006491 1.8e-49 199.9 148 75.0
AT4G20260 Arabidopsis thaliana HOM05D005256 ORTHO05D006491 2.4e-49 199.5 148 70.9
Eucgr.D00001 Eucalyptus grandis HOM05D005256 ORTHO05D006491 2.4e-49 199.5 146 74.0
Solyc10g005100.3 Solanum lycopersicum HOM05D005256 ORTHO05D006491 2.4e-49 199.5 141 73.8
Sopen10g001120 Solanum pennellii HOM05D005256 ORTHO05D006491 2.4e-49 199.5 141 73.8
Lalb_Chr18g0051841 Lupinus albus HOM05D005256 ORTHO05D006491 4.1e-49 198.7 150 76.0
MD10G1224100 Malus domestica HOM05D005256 ORTHO05D006491 4.1e-49 198.7 151 73.5
Peaxi162Scf00888g00114 Petunia axillaris HOM05D005256 ORTHO05D006491 4.1e-49 198.7 134 76.9
MD05G1242300 Malus domestica HOM05D005256 ORTHO05D006491 5.3e-49 198.4 148 75.0
QL11p010746 Quercus lobata HOM05D005256 ORTHO05D006491 5.3e-49 198.4 147 72.1
CSS0003949 Camellia sinensis var. sinensis HOM05D005256 ORTHO05D006491 6.9e-49 198.0 134 78.4
Phvul.009G245700 Phaseolus vulgaris HOM05D005256 ORTHO05D006491 6.9e-49 198.0 148 71.6
CAN.G465.5 Capsicum annuum HOM05D005256 ORTHO05D006491 1.2e-48 197.2 145 74.5
AL7G33640 Arabidopsis lyrata HOM05D005256 ORTHO05D006491 1.5e-48 196.8 148 69.6
CiPaw.09G140800 Carya illinoinensis HOM05D005256 ORTHO05D006491 4.5e-48 195.3 139 76.3
Ciclev10016618m.g Citrus clementina HOM05D005256 ORTHO05D006491 4.5e-48 195.3 141 75.9
Nitab4.5_0004778g0020 Nicotiana tabacum HOM05D005256 ORTHO05D006491 5.9e-48 194.9 141 72.3
Oeu005126.1 Olea europaea HOM05D005256 ORTHO05D006491 1.3e-47 193.7 147 70.7
Psat1g152160 Pisum sativum HOM05D005256 ORTHO05D006491 1.3e-47 193.7 146 71.9
TAR626G1126 Trochodendron aralioides HOM05D005256 ORTHO05D006491 1.3e-47 193.7 132 78.0
GSVIVG01001340001 Vitis vinifera HOM05D005256 ORTHO05D006491 1.7e-47 193.4 134 77.6
PGSC0003DMG400011293 Solanum tuberosum HOM05D005256 ORTHO05D006491 2.2e-47 193.0 142 74.6
arahy.Tifrunner.gnm1.ann1.QDE700 Arachis hypogaea HOM05D005256 ORTHO05D006491 2.9e-47 192.6 140 72.1
arahy.Tifrunner.gnm1.ann1.98CSRD Arachis hypogaea HOM05D005256 ORTHO05D006491 3.8e-47 192.2 136 74.3
Prupe.4G121100 Prunus persica HOM05D005256 ORTHO05D006491 6.5e-47 191.4 135 77.0
Ca_02405_v3 Cicer arietinum L. HOM05D005256 ORTHO05D006491 8.5e-47 191.0 150 70.0
THA.LOC104812925 Tarenaya hassleriana HOM05D005256 ORTHO05D006491 8.5e-47 191.0 148 68.2
Haze_05185 Corylus avellana HOM05D005256 ORTHO05D006491 1.1e-46 190.7 135 74.8
Ah.15g091820 Amaranthus hybridus HOM05D005256 ORTHO05D006491 1.4e-46 190.3 154 71.4
AUR62040985 Chenopodium quinoa HOM05D005256 ORTHO05D006491 1.9e-46 189.9 148 70.3
CARHR227090 Cardamine hirsuta HOM05D005256 ORTHO05D006491 3.2e-46 189.1 148 68.2
Oeu052922.1 Olea europaea HOM05D005256 ORTHO05D006491 4.2e-46 188.7 146 67.8
RcHm_v2.0_Chr5g0022081 Rosa chinensis HOM05D005256 ORTHO05D006491 4.2e-46 188.7 152 69.7
Aa31LG6G2690 Aethionema arabicum HOM05D005256 ORTHO05D006491 7.2e-46 188.0 140 67.1
A01p11960 Brassica napus HOM05D005256 ORTHO05D006491 7.2e-46 188.0 148 66.9
Thhalv10026094m.g Eutrema salsugineum HOM05D005256 ORTHO05D006491 7.2e-46 188.0 148 66.9
Cpa.g.sc30.65 Carica papaya HOM05D005256 ORTHO05D006491 1.2e-45 187.2 149 68.5
Hund20133 Selenicereus undatus HOM05D005256 ORTHO05D006491 1.2e-45 187.2 138 71.7
THA.LOC104811953 Tarenaya hassleriana HOM05D005256 ORTHO05D006491 2.1e-45 186.4 146 67.8
BcaC09g51326 Brassica carinata HOM05D005256 ORTHO05D006491 2.7e-45 186.0 148 66.2
C01p14230 Brassica napus HOM05D005256 ORTHO05D006491 2.7e-45 186.0 148 66.2
BolC1t01388H Brassica oleracea HOM05D005256 ORTHO05D006491 2.7e-45 186.0 148 66.2
BraA01t01138Z Brassica rapa HOM05D005256 ORTHO05D006491 2.7e-45 186.0 148 66.2
C07p50830 Brassica napus HOM05D005256 ORTHO05D006491 7.9e-45 184.5 148 64.9
BolC7t45581H Brassica oleracea HOM05D005256 ORTHO05D006491 7.9e-45 184.5 148 64.9
Sc17g0004300 Simmondsia chinensis HOM05D005256 ORTHO05D006491 1.0e-44 184.1 149 68.5
BcaC06g30648 Brassica carinata HOM05D005256 ORTHO05D006491 1.8e-44 183.3 148 64.2
A03p52380 Brassica napus HOM05D005256 ORTHO05D006491 1.8e-44 183.3 148 64.2
BraA03t14315Z Brassica rapa HOM05D005256 ORTHO05D006491 1.8e-44 183.3 148 64.2
Lalb_Chr15g0083621 Lupinus albus HOM05D005256 ORTHO05D006491 1.8e-44 183.3 141 70.9
Sp7g18620 Schrenkiella parvula HOM05D005256 ORTHO05D006491 1.8e-44 183.3 148 65.5
FAN16G0515 Fragaria x ananassa HOM05D005256 ORTHO05D006491 2.3e-44 183.0 150 66.7
MBI07_g44405_MAGBIO Magnolia biondii HOM05D005256 ORTHO05D006491 2.3e-44 183.0 139 70.5
BcaNung03497 Brassica carinata HOM05D005256 ORTHO05D006491 3.0e-44 182.6 148 64.2
CANSAT35G0328 Cannabis sativa HOM05D005256 ORTHO05D006491 3.0e-44 182.6 138 68.1
FvH4_3g13370 Fragaria vesca HOM05D005256 ORTHO05D006491 5.1e-44 181.8 147 68.7
FAN11G1371 Fragaria x ananassa HOM05D005256 ORTHO05D006491 5.1e-44 181.8 147 68.7
Lsat_1_v5_gn_2_59820 Lactuca sativa HOM05D005256 ORTHO05D006491 5.1e-44 181.8 135 71.1
ATR0737G015 Amborella trichopoda HOM05D005256 ORTHO05D006491 8.8e-44 181.0 153 69.9
FAN25G1093 Fragaria x ananassa HOM05D005256 ORTHO05D006491 1.5e-43 180.3 147 68.0
FAN21G0853 Fragaria x ananassa HOM05D005256 ORTHO05D006491 2.5e-43 179.5 153 65.4
MSTRG.14820 Avicennia marina HOM05D005256 ORTHO05D006491 3.3e-43 179.1 153 67.3
Carub.0007s2091 Capsella rubella HOM05D005256 ORTHO05D006491 3.3e-43 179.1 145 64.8
Cc09_g04590 Coffea canephora HOM05D005256 ORTHO05D006491 2.8e-42 176.0 132 69.7
VMungo1309G1298 Vigna mungo HOM05D005256 ORTHO05D006491 2.8e-42 176.0 134 70.9
COL.COLO4_25022 Corchorus olitorius HOM05D005256 ORTHO05D006491 4.8e-42 175.3 133 71.4
CiPaw.10G108500 Carya illinoinensis HOM05D005256 ORTHO05D006491 3.1e-41 172.6 137 69.3
CDE02G1470 Ceratophyllum demersum HOM05D005256 ORTHO05D006491 5.3e-41 171.8 135 67.4
SalBow7G1744 Salvia bowleyana HOM05D005256 ORTHO05D006491 5.3e-41 171.8 130 67.7
Peaxi162Scf01310g00311 Petunia axillaris HOM05D005256 ORTHO05D006491 9.1e-41 171.0 135 68.1
HPP92_008810 Vanilla planifolia HOM05D005256 ORTHO05D006491 1.2e-40 170.6 131 71.8
Aa31LG9G8540 Aethionema arabicum HOM05D005256 ORTHO05D006491 2.6e-40 169.5 148 62.2
Migut.L00006 Erythranthe guttata HOM05D005256 ORTHO05D006491 2.6e-40 169.5 130 69.2
HanXRQChr14g0439031 Helianthus annuus HOM05D005256 ORTHO05D006491 2.6e-40 169.5 149 62.4
Lsat_1_v5_gn_8_107621 Lactuca sativa HOM05D005256 ORTHO05D006491 3.4e-40 169.1 130 68.5
CDE10G0480 Ceratophyllum demersum HOM05D005256 ORTHO05D006491 4.5e-40 168.7 135 68.1
FAN25G0981 Fragaria x ananassa HOM05D005256 ORTHO05D006491 7.7e-40 167.9 147 66.0
CDE10G1097 Ceratophyllum demersum HOM05D005256 ORTHO05D006491 1.0e-39 167.5 137 65.7
BcaNung03716 Brassica carinata HOM05D005256 ORTHO05D006491 1.3e-39 167.2 144 63.2
ECA238G2220 Erigeron canadensis HOM05D005256 ORTHO05D006491 1.7e-39 166.8 132 69.7
MBI06_g04184_MAGBIO Magnolia biondii HOM05D005256 ORTHO05D006491 2.9e-39 166.0 148 61.5
ECA232G1901 Erigeron canadensis HOM05D005256 ORTHO05D006491 1.1e-38 164.1 130 67.7
Thecc.02G000700 Theobroma cacao HOM05D005256 ORTHO05D006491 2.5e-38 162.9 126 69.0
AUR62042105 Chenopodium quinoa HOM05D005256 ORTHO05D006491 3.2e-38 162.5 113 77.9
HanXRQChr15g0487481 Helianthus annuus HOM05D005256 ORTHO05D006491 4.2e-38 162.2 130 63.8
Os02g0285300 Oryza sativa ssp. japonica HOM05D005256 ORTHO05D006491 4.7e-37 158.7 141 61.0
PSO675G8904 Papaver somniferum HOM05D005256 ORTHO05D006491 6.1e-37 158.3 154 61.7
PSO541G2657 Papaver somniferum HOM05D005256 ORTHO05D006491 1.4e-36 157.1 154 61.0
CDE09G1225 Ceratophyllum demersum HOM05D005256 ORTHO05D006491 5.7e-35 151.8 138 60.1
Nitab4.5_0012748g0020 Nicotiana tabacum HOM05D005256 ORTHO05D006491 2.8e-34 149.4 111 71.2
HanXRQChr09g0257711 Helianthus annuus HOM05D005256 ORTHO05D006491 1.4e-33 147.1 130 60.0
A09p21180 Brassica napus HOM05D005256 ORTHO05D006491 7.0e-33 144.8 152 55.9
BraA09t37724Z Brassica rapa HOM05D005256 ORTHO05D006491 7.0e-33 144.8 152 55.9
BcaC04g21824 Brassica carinata HOM05D005256 ORTHO05D006491 1.2e-32 144.1 152 55.3
C09p27010 Brassica napus HOM05D005256 ORTHO05D006491 1.2e-32 144.1 152 55.3
BolC9t55584H Brassica oleracea HOM05D005256 ORTHO05D006491 1.2e-32 144.1 152 55.3
Nitab4.5_0000217g0040 Nicotiana tabacum HOM05D005256 ORTHO05D006491 1.6e-32 143.7 135 61.5
A06p47070 Brassica napus HOM05D005256 ORTHO05D006491 2.2e-31 139.8 151 55.0
BraA06t27579Z Brassica rapa HOM05D005256 ORTHO05D006491 2.2e-31 139.8 151 55.0
BcaC06g34533 Brassica carinata HOM05D005256 ORTHO05D006491 3.8e-31 139.0 151 54.3
C07p27480 Brassica napus HOM05D005256 ORTHO05D006491 5.0e-31 138.7 151 54.3
BcaB07g30940 Brassica carinata HOM05D005256 ORTHO05D006491 1.9e-30 136.7 152 53.3
BolC7t43278H Brassica oleracea HOM05D005256 ORTHO05D006491 2.5e-30 136.3 151 53.6
BcaB07g30517 Brassica carinata HOM05D005256 ORTHO05D006491 3.2e-30 136.0 153 54.2
DCAR_003732 Daucus carota HOM05D005256 ORTHO05D006491 8.0e-29 131.3 130 54.6
Nitab4.5_0001253g0020 Nicotiana tabacum HOM05D005256 ORTHO05D006491 2.3e-28 129.8 135 57.0
Sp2g09430 Schrenkiella parvula HOM05D005256 ORTHO05D006491 6.7e-28 128.3 151 51.0
Zm00001eb339340 Zea mays HOM05D005256 ORTHO05D006491 8.8e-28 127.9 146 54.8
Os01g0233000 Oryza sativa ssp. japonica HOM05D005256 ORTHO05D006491 2.6e-27 126.3 139 55.4
Zm00001eb119130 Zea mays HOM05D005256 ORTHO05D006491 2.8e-26 122.9 132 56.8
MBI06_g26562_MAGBIO Magnolia biondii HOM05D005256 ORTHO05D006491 4.8e-26 122.1 98 66.3
Zm00001eb236850 Zea mays HOM05D005256 ORTHO05D006491 3.5e-24 115.9 115 57.4
C02p45090 Brassica napus HOM05D005256 ORTHO05D006491 1.0e-23 114.4 153 51.0
BolC2t10548H Brassica oleracea HOM05D005256 ORTHO05D006491 1.0e-23 114.4 153 51.0
Lalb_Chr20g0114421 Lupinus albus HOM05D005256 ORTHO05D006491 4.2e-22 109.0 82 72.0
Lsat_1_v5_gn_9_9820 Lactuca sativa HOM05D005256 ORTHO05D006491 2.6e-19 99.8 100 60.0
SGA_v2.0_scaffold51G18675 Striga asiatica HOM05D003701 ORTHO05D004771 8.5e-15 84.7 67 70.1
Mapoly0087s0006 Marchantia polymorpha HOM05D005256 ORTHO05D006491 1.1e-09 67.8 143 34.3
Zm00001eb381370 Zea mays HOM05D005256 ORTHO05D006491 3.5e-08 62.8 60 60.0
FvH4_7g19390 Fragaria vesca HOM05D036880 ORTHO05D006491 1.7e-07 60.5 58 55.2


User provided reference genes

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