Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra01G0038800 Salix brachista HOM05D015619 ORTHO05D009044 8.5e-258 893.3 485 100.0
Sabra15G0099600 Salix brachista HOM05D015619 ORTHO05D009044 9.5e-225 783.5 486 80.2
Sabra15G0100200 Salix brachista HOM05D015619 ORTHO05D009044 9.5e-225 783.5 486 80.2
Sabra15G0099900 Salix brachista HOM05D015619 ORTHO05D009044 1.2e-224 783.1 486 80.2
Sabra15G0099200 Salix brachista HOM05D015619 ORTHO05D009044 1.2e-222 776.5 486 79.8
Sabra07G0040900 Salix brachista HOM05D015619 ORTHO05D009044 4.1e-220 768.1 482 80.3
Potri.001G054200 Populus trichocarpa HOM05D015619 ORTHO05D009044 3.0e-215 751.9 485 84.5
Sabra03G0128000 Salix brachista HOM05D015619 ORTHO05D009044 1.2e-78 298.1 494 40.7
Duzib248G1625 Durio zibethinus HOM05D007346 ORTHO05D009044 6.9e-42 176.0 459 30.9
Cfa005279 Carpinus fangiana HOM05D007346 ORTHO05D009044 1.0e-37 162.2 460 29.6
Cfa005319 Carpinus fangiana HOM05D007346 ORTHO05D009044 2.3e-37 161.0 458 30.8
Haze_02114 Corylus avellana HOM05D007346 ORTHO05D009044 2.2e-35 154.5 466 29.0
RcHm_v2.0_Chr4g0388171 Rosa chinensis HOM05D007346 ORTHO05D009044 6.9e-34 149.4 473 31.3
Ciclev10030189m.g Citrus clementina HOM05D007346 ORTHO05D009044 1.0e-32 145.6 487 30.0
Haze_02115 Corylus avellana HOM05D007346 ORTHO05D009044 1.7e-32 144.8 468 29.3
FAN24G2319 Fragaria x ananassa HOM05D007346 ORTHO05D009044 1.7e-32 144.8 471 31.4
TWI81G1010 Tripterygium wilfordii HOM05D007346 ORTHO05D009044 2.2e-32 144.4 465 28.6
Prupe.8G152400 Prunus persica HOM05D007346 ORTHO05D009044 6.5e-32 142.9 459 28.1
RcHm_v2.0_Chr4g0393391 Rosa chinensis HOM05D007346 ORTHO05D009044 8.5e-32 142.5 480 35.2
RcHm_v2.0_Chr6g0247891 Rosa chinensis HOM05D007346 ORTHO05D009044 4.2e-31 140.2 470 32.8
FAN24G1006 Fragaria x ananassa HOM05D007346 ORTHO05D009044 3.6e-30 137.1 474 26.4
RcHm_v2.0_Chr6g0254551 Rosa chinensis HOM05D007346 ORTHO05D009044 6.1e-30 136.3 469 28.8
FvH4_2g04880 Fragaria vesca HOM05D007346 ORTHO05D009044 3.9e-29 133.7 476 26.5
Prupe.8G151600 Prunus persica HOM05D007346 ORTHO05D009044 3.9e-29 133.7 455 30.8
FvH4_4g02080 Fragaria vesca HOM05D007346 ORTHO05D009044 8.8e-29 132.5 474 30.0
Cfa005278 Carpinus fangiana HOM05D007346 ORTHO05D009044 5.7e-28 129.8 280 33.2
RcHm_v2.0_Chr5g0063131 Rosa chinensis HOM05D007346 ORTHO05D009044 1.7e-27 128.3 470 30.4
FvH4_4g01970 Fragaria vesca HOM05D007346 ORTHO05D009044 6.3e-27 126.3 478 25.1
RcHm_v2.0_Chr4g0393471 Rosa chinensis HOM05D007346 ORTHO05D009044 8.2e-27 125.9 502 33.1
Gorai.009G294900 Gossypium raimondii HOM05D007346 ORTHO05D009044 1.1e-26 125.6 463 28.1
Thecc.02G045400 Theobroma cacao HOM05D007346 ORTHO05D009044 1.2e-25 122.1 459 28.1
FvH4_2g03062 Fragaria vesca HOM05D007346 ORTHO05D009044 1.5e-25 121.7 448 32.6
Gohir.D05G281400 Gossypium hirsutum HOM05D007346 ORTHO05D009044 1.5e-25 121.7 463 27.6
Duzib132G1061 Durio zibethinus HOM05D007346 ORTHO05D009044 2.0e-25 121.3 465 27.3
RcHm_v2.0_Chr4g0393001 Rosa chinensis HOM05D007346 ORTHO05D009044 3.4e-25 120.6 504 32.9
FAN12G0105 Fragaria x ananassa HOM05D007346 ORTHO05D009044 5.9e-25 119.8 478 24.9
TWI59G0144 Tripterygium wilfordii HOM05D007346 ORTHO05D009044 1.7e-24 118.2 482 25.5
Cfa012527 Carpinus fangiana HOM05D007346 ORTHO05D009044 1.1e-23 115.5 465 29.7
FAN12G2737 Fragaria x ananassa HOM05D007346 ORTHO05D009044 3.2e-23 114.0 474 28.5
FAN24G3266 Fragaria x ananassa HOM05D007346 ORTHO05D009044 7.2e-23 112.8 455 24.8
FAN15G1511 Fragaria x ananassa HOM05D007346 ORTHO05D009044 2.7e-22 110.9 468 29.3
FvH4_2g16551 Fragaria vesca HOM05D007346 ORTHO05D009044 7.9e-22 109.4 455 24.6
FvH4_4g02090 Fragaria vesca HOM05D007346 ORTHO05D009044 7.9e-22 109.4 472 28.2
FvH4_2g03731 Fragaria vesca HOM05D007346 ORTHO05D009044 1.0e-21 109.0 451 28.4
FvH4_2g16580 Fragaria vesca HOM05D007346 ORTHO05D009044 3.9e-21 107.1 494 29.6
FAN20G2910 Fragaria x ananassa HOM05D007346 ORTHO05D009044 3.9e-21 107.1 475 24.8
RcHm_v2.0_Chr6g0254631 Rosa chinensis HOM05D007346 ORTHO05D009044 5.1e-21 106.7 506 32.8
Gohir.A05G279800 Gossypium hirsutum HOM05D007346 ORTHO05D009044 6.7e-21 106.3 261 30.7
RcHm_v2.0_Chr6g0254611 Rosa chinensis HOM05D007346 ORTHO05D009044 6.7e-21 106.3 504 32.3
FAN12G1074 Fragaria x ananassa HOM05D007346 ORTHO05D009044 8.8e-21 105.9 385 29.1
FAN15G1854 Fragaria x ananassa HOM05D007346 ORTHO05D009044 1.1e-20 105.5 453 24.7
FAN24G3549 Fragaria x ananassa HOM05D007346 ORTHO05D009044 3.3e-20 104.0 493 29.6
FvH4_4g01590 Fragaria vesca HOM05D007346 ORTHO05D009044 4.4e-20 103.6 422 29.1
FvH4_4g01581 Fragaria vesca HOM05D007346 ORTHO05D009044 5.7e-20 103.2 454 28.4
FAN15G1755 Fragaria x ananassa HOM05D007346 ORTHO05D009044 2.8e-19 100.9 487 24.2
FvH4_4g02150 Fragaria vesca HOM05D007346 ORTHO05D009044 3.1e-18 97.4 389 28.3
FAN18G1252 Fragaria x ananassa HOM05D007346 ORTHO05D009044 5.3e-18 96.7 262 30.2
FAN17G3078 Fragaria x ananassa HOM05D007346 ORTHO05D009044 7.0e-18 96.3 446 27.8
RcHm_v2.0_Chr6g0254681 Rosa chinensis HOM05D007346 ORTHO05D009044 1.2e-17 95.5 538 31.0
Cpa.g.sc62.77 Carica papaya HOM05D007346 ORTHO05D009044 1.5e-17 95.1 474 23.4
FAN12G0212 Fragaria x ananassa HOM05D007346 ORTHO05D009044 3.5e-17 94.0 412 27.7
FAN22G0819 Fragaria x ananassa HOM05D007346 ORTHO05D009044 1.0e-16 92.4 427 26.5
FvH4_4g01551 Fragaria vesca HOM05D007346 ORTHO05D009044 2.5e-15 87.8 195 33.3
FAN25G0093 Fragaria x ananassa HOM05D007346 ORTHO05D009044 5.5e-15 86.7 275 28.0
FvH4_2g04271 Fragaria vesca HOM05D007346 ORTHO05D009044 1.6e-14 85.1 475 23.6
Thecc.02G045200 Theobroma cacao HOM05D007346 ORTHO05D009044 1.6e-14 85.1 264 28.8
FAN21G1548 Fragaria x ananassa HOM05D007346 ORTHO05D009044 6.1e-14 83.2 275 27.3
MD03G1012300 Malus domestica HOM05D007346 ORTHO05D009044 1.8e-13 81.6 398 23.6
FAN24G3501 Fragaria x ananassa HOM05D007346 ORTHO05D009044 6.7e-13 79.7 274 27.4
SGA_v2.0_scaffold32G13296 Striga asiatica HOM05D028864 ORTHO05D009044 7.4e-12 76.3 188 29.3
FAN06G1165 Fragaria x ananassa HOM05D007346 ORTHO05D009044 8.2e-11 72.8 174 31.6
RcHm_v2.0_Chr4g0388141 Rosa chinensis HOM05D007346 ORTHO05D009044 1.1e-10 72.4 142 31.7
SGA_v2.0_scaffold32G13304 Striga asiatica HOM05D028864 ORTHO05D009044 4.1e-10 70.5 191 29.8
FvH4_5g33621 Fragaria vesca HOM05D007346 ORTHO05D035450 2.0e-09 68.2 340 24.4
Manes.05G141800 Manihot esculenta HOM05D000151 ORTHO05D000074 2.6e-09 67.8 202 32.7
Nn6g31858 Nelumbo nucifera HOM05D000151 ORTHO05D000074 2.6e-09 67.8 204 29.4
PSO210G2694 Papaver somniferum HOM05D000151 ORTHO05D000074 2.6e-09 67.8 208 28.4
QL02p017356 Quercus lobata HOM05D000151 ORTHO05D000074 5.9e-09 66.6 182 30.8
TPR.G38190 Trifolium pratense HOM05D000151 ORTHO05D000074 5.9e-09 66.6 190 26.8
FvH4_7g08620 Fragaria vesca HOM05D007346 ORTHO05D009044 7.7e-09 66.2 111 34.2
Actinidia15471 Actinidia chinensis HOM05D000151 ORTHO05D000074 1.0e-08 65.9 206 29.6
Haze_22777 Corylus avellana HOM05D000151 ORTHO05D000074 1.0e-08 65.9 213 30.5
Dinv39566 Davidia involucrata HOM05D000151 ORTHO05D000074 1.0e-08 65.9 198 28.3
TAR636G0046 Trochodendron aralioides HOM05D000151 ORTHO05D000074 1.0e-08 65.9 181 27.1
Gorai.010G001100 Gossypium raimondii HOM05D000151 ORTHO05D000074 1.3e-08 65.5 204 29.9
Cfa014025 Carpinus fangiana HOM05D000151 ORTHO05D000074 2.2e-08 64.7 200 31.5
SGA_v2.0_scaffold32G13300 Striga asiatica HOM05D028864 ORTHO05D009044 2.2e-08 64.7 113 34.5
MELO3C017000.2 Cucumis melo HOM05D000151 ORTHO05D000074 3.8e-08 63.9 206 30.6
TAR628G1200 Trochodendron aralioides HOM05D000151 ORTHO05D000074 3.8e-08 63.9 202 29.2
PGSC0003DMG400009960 Solanum tuberosum HOM05D000151 ORTHO05D000074 5.0e-08 63.5 308 24.7
CSS0022996 Camellia sinensis var. sinensis HOM05D000151 ORTHO05D000074 6.5e-08 63.2 201 29.9
FAN24G3164 Fragaria x ananassa HOM05D007346 ORTHO05D009044 6.5e-08 63.2 131 33.6
HanXRQChr14g0428481 Helianthus annuus HOM05D000151 ORTHO05D000074 1.1e-07 62.4 205 25.9
arahy.Tifrunner.gnm1.ann1.PYC0TU Arachis hypogaea HOM05D000151 ORTHO05D000074 2.5e-07 61.2 178 28.1
MD08G1006100 Malus domestica HOM05D000151 ORTHO05D000074 2.5e-07 61.2 204 28.9
Potri.002G014500 Populus trichocarpa HOM05D000151 ORTHO05D000074 3.2e-07 60.8 201 27.9
CsaV3_4G037010 Cucumis sativus L. HOM05D000151 ORTHO05D000074 4.2e-07 60.5 206 30.1
Ciclev10001350m.g Citrus clementina HOM05D000151 ORTHO05D000074 5.5e-07 60.1 194 28.4
CANSAT25G2327 Cannabis sativa HOM05D000151 ORTHO05D000074 7.2e-07 59.7 201 26.4
MD15G1005500 Malus domestica HOM05D000151 ORTHO05D000074 7.2e-07 59.7 206 28.2
RcHm_v2.0_Chr6g0303821 Rosa chinensis HOM05D000151 ORTHO05D000074 7.2e-07 59.7 178 30.3
FAN20G1383 Fragaria x ananassa HOM05D000151 ORTHO05D000074 9.4e-07 59.3 198 28.3
Atru.chr5.3530 Acer truncatum HOM05D015619 ORTHO05D009044 1.6e-06 58.5 109 33.0
Duzib116G0495 Durio zibethinus HOM05D000151 ORTHO05D000074 1.6e-06 58.5 210 31.9
QL02p013380 Quercus lobata HOM05D000151 ORTHO05D000074 1.6e-06 58.5 207 29.5
Haze_22770 Corylus avellana HOM05D000151 ORTHO05D000074 2.1e-06 58.2 182 30.2
Lsat_1_v5_gn_2_5520 Lactuca sativa HOM05D000151 ORTHO05D000074 2.1e-06 58.2 205 27.3
MBI11_g05443_MAGBIO Magnolia biondii HOM05D000151 ORTHO05D000074 2.7e-06 57.8 219 27.9
Manes.18G008400 Manihot esculenta HOM05D000151 ORTHO05D000074 3.6e-06 57.4 198 30.8
Nitab4.5_0003280g0060 Nicotiana tabacum HOM05D000151 ORTHO05D000074 4.7e-06 57.0 199 28.1
Prupe.1G358000 Prunus persica HOM05D000151 ORTHO05D000074 6.1e-06 56.6 201 27.9
Sabra02G0011500 Salix brachista HOM05D000151 ORTHO05D000074 8.0e-06 56.2 201 26.9


User provided reference genes

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