Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra01G0030500 Salix brachista HOM05D007259 ORTHO05D009158 2.4e-95 352.1 165 100.0
Potri.001G044200 Populus trichocarpa HOM05D007259 ORTHO05D009158 2.5e-92 342.0 165 97.0
Manes.04G102300 Manihot esculenta HOM05D007259 ORTHO05D009158 6.8e-82 307.4 165 86.7
FAN05G5272 Fragaria x ananassa HOM05D007259 ORTHO05D009158 9.8e-81 303.5 165 83.6
FvH4_6g28630 Fragaria vesca HOM05D007259 ORTHO05D009158 4.8e-80 301.2 165 82.4
FAN14G4954 Fragaria x ananassa HOM05D007259 ORTHO05D009158 4.8e-80 301.2 165 82.4
QL05p036089 Quercus lobata HOM05D007259 ORTHO05D009158 1.1e-79 300.1 166 82.5
Ciclev10026584m.g Citrus clementina HOM05D007259 ORTHO05D009158 2.4e-79 298.9 165 82.4
RcHm_v2.0_Chr2g0132951 Rosa chinensis HOM05D007259 ORTHO05D009158 2.4e-79 298.9 165 81.8
CANSAT56G1631 Cannabis sativa HOM05D007259 ORTHO05D009158 9.1e-79 297.0 165 81.2
TWI75G0585 Tripterygium wilfordii HOM05D007259 ORTHO05D009158 1.2e-78 296.6 165 81.2
Cfa001880 Carpinus fangiana HOM05D007259 ORTHO05D009158 3.5e-78 295.0 165 80.6
Actinidia36875 Actinidia chinensis HOM05D007259 ORTHO05D009158 5.9e-78 294.3 161 82.0
Rhsim08G0205600 Rhododendron simsii HOM05D007259 ORTHO05D009158 1.0e-77 293.5 161 82.6
Sp5g34900 Schrenkiella parvula HOM05D007259 ORTHO05D009158 2.9e-77 292.0 165 80.0
Ah.01g006970 Amaranthus hybridus HOM05D007259 ORTHO05D009158 3.8e-77 291.6 161 80.1
CAN.G1932.2 Capsicum annuum HOM05D007259 ORTHO05D009158 3.8e-77 291.6 165 81.2
FAN09G1653 Fragaria x ananassa HOM05D007259 ORTHO05D009158 3.8e-77 291.6 164 81.7
Hund00433 Selenicereus undatus HOM05D007259 ORTHO05D009158 5.0e-77 291.2 161 80.1
Gohir.D06G118700 Gossypium hirsutum HOM05D007259 ORTHO05D009158 6.5e-77 290.8 165 79.4
PSO170G4635 Papaver somniferum HOM05D007259 ORTHO05D009158 6.5e-77 290.8 166 80.1
GSVIVG01015956001 Vitis vinifera HOM05D007259 ORTHO05D009158 6.5e-77 290.8 161 80.1
BcaC03g15926 Brassica carinata HOM05D007259 ORTHO05D009158 8.5e-77 290.4 165 78.8
BolC2t09700H Brassica oleracea HOM05D007259 ORTHO05D009158 8.5e-77 290.4 165 78.8
CSS0004525 Camellia sinensis var. sinensis HOM05D007259 ORTHO05D009158 8.5e-77 290.4 161 82.0
Eucgr.F03958 Eucalyptus grandis HOM05D007259 ORTHO05D009158 1.1e-76 290.0 165 77.6
Gorai.010G136500 Gossypium raimondii HOM05D007259 ORTHO05D009158 1.1e-76 290.0 165 79.4
PGR102G1952 Punica granatum HOM05D007259 ORTHO05D009158 1.1e-76 290.0 165 80.6
C02p36870 Brassica napus HOM05D007259 ORTHO05D009158 1.9e-76 289.3 165 78.2
AT1G80860 Arabidopsis thaliana HOM05D007259 ORTHO05D009158 2.5e-76 288.9 165 78.2
BcaB05g25221 Brassica carinata HOM05D007259 ORTHO05D009158 2.5e-76 288.9 165 77.6
Duzib235G0063 Durio zibethinus HOM05D007259 ORTHO05D009158 2.5e-76 288.9 165 79.4
PSO017G0751 Papaver somniferum HOM05D007259 ORTHO05D009158 2.5e-76 288.9 166 80.1
Peaxi162Scf00207g00430 Petunia axillaris HOM05D007259 ORTHO05D009158 5.5e-76 287.7 165 78.8
A02p23100 Brassica napus HOM05D007259 ORTHO05D009158 7.2e-76 287.3 165 78.2
BraA02t07308Z Brassica rapa HOM05D007259 ORTHO05D009158 7.2e-76 287.3 165 78.2
Gohir.A06G114200 Gossypium hirsutum HOM05D007259 ORTHO05D009158 7.2e-76 287.3 165 78.2
Lsat_1_v5_gn_5_8261 Lactuca sativa HOM05D007259 ORTHO05D009158 7.2e-76 287.3 165 77.6
ClCG10G012930 Citrullus lanatus HOM05D007259 ORTHO05D009158 9.4e-76 287.0 161 80.7
Thhalv10019243m.g Eutrema salsugineum HOM05D007259 ORTHO05D009158 9.4e-76 287.0 165 78.8
Medtr4g007095 Medicago truncatula HOM05D007259 ORTHO05D009158 9.4e-76 287.0 161 79.5
Atru.chr10.2413 Acer truncatum HOM05D007259 ORTHO05D009158 1.6e-75 286.2 165 78.8
Carub.0002s2668 Capsella rubella HOM05D007259 ORTHO05D009158 1.6e-75 286.2 165 77.0
Dinv21412 Davidia involucrata HOM05D007259 ORTHO05D009158 1.6e-75 286.2 165 78.2
AL2G40530 Arabidopsis lyrata HOM05D007259 ORTHO05D009158 2.1e-75 285.8 165 78.8
Cc04_g05120 Coffea canephora HOM05D007259 ORTHO05D009158 2.1e-75 285.8 165 77.0
Sc12g0008330 Simmondsia chinensis HOM05D007259 ORTHO05D009158 2.1e-75 285.8 161 76.4
EL10Ac9g22206 Beta vulgaris HOM05D007259 ORTHO05D009158 4.7e-75 284.6 166 78.3
Lalb_Chr01g0012071 Lupinus albus HOM05D007259 ORTHO05D009158 4.7e-75 284.6 161 78.9
Sopen06g025720 Solanum pennellii HOM05D007259 ORTHO05D009158 8.0e-75 283.9 165 78.8
VMungo0331G0163 Vigna mungo HOM05D007259 ORTHO05D009158 8.0e-75 283.9 161 78.3
Lj3g0012869 Lotus japonicus HOM05D007259 ORTHO05D009158 1.0e-74 283.5 163 77.3
Aa31LG4G1140 Aethionema arabicum HOM05D007259 ORTHO05D009158 1.4e-74 283.1 161 78.9
CsaV3_3G032790 Cucumis sativus L. HOM05D007259 ORTHO05D009158 1.8e-74 282.7 161 79.5
Lj5A81T88 Lonicera japonica HOM05D007259 ORTHO05D009158 1.8e-74 282.7 165 77.0
CARHR073610 Cardamine hirsuta HOM05D007259 ORTHO05D009158 3.0e-74 282.0 165 78.2
Prupe.3G098300 Prunus persica HOM05D007259 ORTHO05D009158 4.0e-74 281.6 161 80.1
Solyc06g068470.3 Solanum lycopersicum HOM05D007259 ORTHO05D009158 5.2e-74 281.2 165 77.6
Thecc.06G041800 Theobroma cacao HOM05D007259 ORTHO05D009158 5.2e-74 281.2 165 77.6
Oeu060130.1 Olea europaea HOM05D007259 ORTHO05D009158 8.8e-74 280.4 161 77.0
THA.LOC104812409 Tarenaya hassleriana HOM05D007259 ORTHO05D009158 1.5e-73 279.6 165 78.2
CiPaw.01G254600 Carya illinoinensis HOM05D007259 ORTHO05D009158 2.6e-73 278.9 165 77.0
HanXRQChr05g0153761 Helianthus annuus HOM05D007259 ORTHO05D009158 2.6e-73 278.9 165 74.5
MSTRG.4677 Avicennia marina HOM05D007259 ORTHO05D009158 5.7e-73 277.7 165 76.4
PGSC0003DMG400028490 Solanum tuberosum HOM05D007259 ORTHO05D009158 9.8e-73 276.9 165 76.4
TPR.G23079 Trifolium pratense HOM05D007259 ORTHO05D009158 2.2e-72 275.8 161 75.2
Medtr4g007090 Medicago truncatula HOM05D007259 ORTHO05D009158 6.3e-72 274.2 161 75.2
TPR.G23090 Trifolium pratense HOM05D007259 ORTHO05D009158 8.3e-72 273.9 161 75.8
Glyma.08G218900 Glycine max HOM05D007259 ORTHO05D009158 1.8e-71 272.7 164 75.6
Phvul.010G161400 Phaseolus vulgaris HOM05D007259 ORTHO05D009158 7.0e-71 270.8 161 76.4
Sed0006537 Sechium edule HOM05D007259 ORTHO05D009158 7.0e-71 270.8 161 75.8
Psat7g260280 Pisum sativum HOM05D007259 ORTHO05D009158 9.2e-71 270.4 158 77.8
SGA_v2.0_scaffold26G11300 Striga asiatica HOM05D007259 ORTHO05D009158 9.2e-71 270.4 161 75.2
Nn8g39898 Nelumbo nucifera HOM05D007259 ORTHO05D009158 3.5e-70 268.5 165 73.9
SalBow6G4962 Salvia bowleyana HOM05D007259 ORTHO05D009158 1.7e-69 266.2 164 72.0
Migut.D01126 Erythranthe guttata HOM05D007259 ORTHO05D009158 1.9e-68 262.7 161 73.9
Nitab4.5_0008962g0030 Nicotiana tabacum HOM05D007259 ORTHO05D009158 6.8e-66 254.2 144 79.2
BcaB05g25224 Brassica carinata HOM05D007259 ORTHO05D009158 1.1e-63 246.9 165 70.9
Haze_16667 Corylus avellana HOM05D007259 ORTHO05D009158 4.1e-63 245.0 262 50.4
MBI15_g08512_MAGBIO Magnolia biondii HOM05D007259 ORTHO05D009158 5.4e-63 244.6 161 68.9
Zm00001eb184520 Zea mays HOM05D007259 ORTHO05D009158 1.3e-61 240.0 161 69.6
Potri.003G182400 Populus trichocarpa HOM05D007259 ORTHO05D009158 1.7e-61 239.6 117 92.3
Os02g0612100 Oryza sativa ssp. japonica HOM05D007259 ORTHO05D009158 6.6e-61 237.7 164 69.5
unitig_60.g25615 Utricularia gibba HOM05D007259 ORTHO05D009158 6.6e-61 237.7 197 58.4
ECA246G0776 Erigeron canadensis HOM05D007259 ORTHO05D009158 2.8e-59 232.3 126 84.9
CDE12G0386 Ceratophyllum demersum HOM05D007259 ORTHO05D009158 4.3e-52 208.4 140 68.6
DCAR_021369 Daucus carota HOM05D007259 ORTHO05D009158 3.6e-51 205.3 109 87.2
HPP92_010735 Vanilla planifolia HOM05D007259 ORTHO05D009158 4.7e-51 204.9 156 60.3
AagrBONN_evm.TU.Sc2ySwM_117.1157 Anthoceros agrestis HOM05D007259 ORTHO05D009158 9.8e-49 197.2 157 56.7
SEGI_39537 Sequoiadendron giganteum HOM05D007259 ORTHO05D009158 6.4e-48 194.5 159 56.6
SMO141G0127 Selaginella moellendorffii HOM05D007259 ORTHO05D009158 9.2e-47 190.7 159 55.3
Pp3c6_3720 Physcomitrium patens HOM05D007259 ORTHO05D009158 1.9e-44 183.0 164 54.3
MD17G1223400 Malus domestica HOM05D007259 ORTHO05D009158 6.6e-37 157.9 79 89.9
vmacro19057 Vaccinium macrocarpon HOM05D007259 ORTHO05D009158 9.6e-36 154.1 80 87.5
Glyma.07G022900 Glycine max HOM05D007259 ORTHO05D009158 2.8e-35 152.5 114 65.8
Aqoxy2G00331 Aquilegia oxysepala HOM05D001307 ORTHO05D001158 1.8e-34 149.8 91 71.4
FAN02G2583 Fragaria x ananassa HOM05D007259 ORTHO05D009158 8.9e-34 147.5 82 76.8
MD17G1223600 Malus domestica HOM05D007259 ORTHO05D009158 8.9e-34 147.5 83 75.9
Nitab4.5_0000886g0050 Nicotiana tabacum HOM05D007259 ORTHO05D009158 2.9e-32 142.5 91 68.1
Cpa.g.sc10.78 Carica papaya HOM05D007259 ORTHO05D009158 1.4e-31 140.2 82 74.4
ATR0739G058 Amborella trichopoda HOM05D007259 ORTHO05D009158 1.2e-30 137.1 83 75.9
MELO3C026739.2 Cucumis melo HOM05D007259 ORTHO05D009158 5.1e-29 131.7 82 70.7
Lj5C80T7 Lonicera japonica HOM05D007259 ORTHO05D009158 5.1e-29 131.7 82 72.0
HPP92_010738 Vanilla planifolia HOM05D007259 ORTHO05D009158 6.2e-27 124.8 94 62.8
SalBow8G2481 Salvia bowleyana HOM05D007259 ORTHO05D009158 6.9e-18 94.7 76 64.5
COL.COLO4_26703 Corchorus olitorius HOM05D007259 ORTHO05D009158 2.5e-12 76.3 43 79.1


User provided reference genes

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