Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra01G0020900 Salix brachista HOM05D006056 ORTHO05D007136 4.4e-144 514.6 261 100.0
Potri.001G028500 Populus trichocarpa HOM05D006056 ORTHO05D007136 2.4e-81 306.2 261 65.5
Manes.04G158100 Manihot esculenta HOM05D006056 ORTHO05D007136 1.6e-61 240.4 264 53.8
Haze_03016 Corylus avellana HOM05D006056 ORTHO05D007136 1.3e-58 230.7 264 50.8
Haze_03023 Corylus avellana HOM05D006056 ORTHO05D007136 1.3e-58 230.7 264 50.4
CiPaw.13G014800 Carya illinoinensis HOM05D006056 ORTHO05D007136 2.2e-58 229.9 264 51.9
TWI38G2317 Tripterygium wilfordii HOM05D006056 ORTHO05D007136 1.8e-57 226.9 264 52.3
Prupe.2G039200 Prunus persica HOM05D006056 ORTHO05D007136 2.0e-56 223.4 272 50.7
CANSAT56G1604 Cannabis sativa HOM05D006056 ORTHO05D007136 2.7e-56 223.0 237 53.6
RcHm_v2.0_Chr1g0325731 Rosa chinensis HOM05D006056 ORTHO05D007136 2.7e-56 223.0 269 50.2
Eucgr.G03224 Eucalyptus grandis HOM05D006056 ORTHO05D007136 1.7e-55 220.3 262 49.6
arahy.Tifrunner.gnm1.ann1.X1BBAM Arachis hypogaea HOM05D006056 ORTHO05D007136 2.9e-55 219.5 215 55.3
CiPaw.14G008500 Carya illinoinensis HOM05D006056 ORTHO05D007136 2.9e-55 219.5 234 51.7
Atru.chr12.1257 Acer truncatum HOM05D006056 ORTHO05D007136 5.0e-55 218.8 258 51.6
arahy.Tifrunner.gnm1.ann1.6DS776 Arachis hypogaea HOM05D006056 ORTHO05D007136 8.5e-55 218.0 215 54.9
ClCG08G010680 Citrullus lanatus HOM05D006056 ORTHO05D007136 2.5e-54 216.5 240 50.4
Ciclev10002629m.g Citrus clementina HOM05D006056 ORTHO05D007136 2.5e-54 216.5 263 49.4
Lalb_Chr04g0264131 Lupinus albus HOM05D006056 ORTHO05D007136 3.2e-54 216.1 262 51.1
CsaV3_6G035850 Cucumis sativus L. HOM05D006056 ORTHO05D007136 7.2e-54 214.9 240 50.8
FAN01G1581 Fragaria x ananassa HOM05D006056 ORTHO05D007136 7.2e-54 214.9 269 49.4
PGR044G1154 Punica granatum HOM05D006056 ORTHO05D007136 1.2e-53 214.2 280 46.4
THA.LOC104826732 Tarenaya hassleriana HOM05D006056 ORTHO05D007136 1.2e-53 214.2 261 49.4
C05p60560 Brassica napus HOM05D006056 ORTHO05D007136 1.6e-53 213.8 267 49.4
Gohir.D10G193500 Gossypium hirsutum HOM05D006056 ORTHO05D007136 2.1e-53 213.4 261 49.4
Gorai.011G216600 Gossypium raimondii HOM05D006056 ORTHO05D007136 2.1e-53 213.4 261 49.4
Psat5g221760 Pisum sativum HOM05D006056 ORTHO05D007136 2.7e-53 213.0 263 48.3
Thecc.10G150600 Theobroma cacao HOM05D006056 ORTHO05D007136 2.7e-53 213.0 261 49.0
Cpa.g.sc2293.2 Carica papaya HOM05D006056 ORTHO05D007136 3.6e-53 212.6 265 49.1
AL3G17840 Arabidopsis lyrata HOM05D006056 ORTHO05D007136 8.0e-53 211.5 262 48.9
MELO3C011393.2 Cucumis melo HOM05D006056 ORTHO05D007136 8.0e-53 211.5 242 50.8
FvH4_7g03410 Fragaria vesca HOM05D006056 ORTHO05D007136 1.0e-52 211.1 269 48.7
QL04p017566 Quercus lobata HOM05D006056 ORTHO05D007136 1.0e-52 211.1 270 48.1
AT3G06730 Arabidopsis thaliana HOM05D006056 ORTHO05D007136 2.3e-52 209.9 262 48.5
Duzib106G1426 Durio zibethinus HOM05D006056 ORTHO05D007136 2.3e-52 209.9 262 48.5
BraA01t04419Z Brassica rapa HOM05D006056 ORTHO05D007136 3.0e-52 209.5 261 47.9
Duzib114G0422 Durio zibethinus HOM05D006056 ORTHO05D007136 4.0e-52 209.1 261 49.0
Lalb_Chr01g0014891 Lupinus albus HOM05D006056 ORTHO05D007136 5.2e-52 208.8 247 49.8
BcaC05g30553 Brassica carinata HOM05D006056 ORTHO05D007136 6.8e-52 208.4 264 48.9
Dinv44692 Davidia involucrata HOM05D006056 ORTHO05D007136 6.8e-52 208.4 234 51.7
Duzib106G0937 Durio zibethinus HOM05D006056 ORTHO05D007136 8.8e-52 208.0 238 50.4
Sp3g05700 Schrenkiella parvula HOM05D006056 ORTHO05D007136 8.8e-52 208.0 262 48.9
Sed0016890 Sechium edule HOM05D006056 ORTHO05D007136 8.8e-52 208.0 237 49.8
FAN06G0497 Fragaria x ananassa HOM05D006056 ORTHO05D007136 1.2e-51 207.6 269 48.0
BNapus_Darmor_BZH_scaffold_117p00040 Brassica napus HOM05D006056 ORTHO05D007136 1.5e-51 207.2 262 48.9
FAN10G2490 Fragaria x ananassa HOM05D006056 ORTHO05D007136 2.0e-51 206.8 269 48.7
Lj3g0018945 Lotus japonicus HOM05D006056 ORTHO05D007136 2.0e-51 206.8 239 49.0
MD07G1048800 Malus domestica HOM05D006056 ORTHO05D007136 2.0e-51 206.8 245 49.0
Actinidia10152 Actinidia chinensis HOM05D006056 ORTHO05D007136 3.4e-51 206.1 254 48.0
A05p41340 Brassica napus HOM05D006056 ORTHO05D007136 3.4e-51 206.1 262 47.7
BraA05t22856Z Brassica rapa HOM05D006056 ORTHO05D007136 3.4e-51 206.1 262 47.7
MD02G1283300 Malus domestica HOM05D006056 ORTHO05D007136 3.4e-51 206.1 245 48.6
EL10Ac2g02787 Beta vulgaris HOM05D006056 ORTHO05D007136 5.7e-51 205.3 235 49.8
DCAR_031839 Daucus carota HOM05D006056 ORTHO05D007136 5.7e-51 205.3 227 53.3
Thhalv10021607m.g Eutrema salsugineum HOM05D006056 ORTHO05D007136 5.7e-51 205.3 266 49.2
Duzib106G1601 Durio zibethinus HOM05D006056 ORTHO05D007136 7.5e-51 204.9 262 47.7
BolC5t34710H Brassica oleracea HOM05D006056 ORTHO05D007136 9.8e-51 204.5 267 48.3
Phvul.005G025600 Phaseolus vulgaris HOM05D006056 ORTHO05D007136 1.3e-50 204.1 250 48.0
GSVIVG01036664001 Vitis vinifera HOM05D006056 ORTHO05D007136 1.3e-50 204.1 226 52.2
FAN03G2563 Fragaria x ananassa HOM05D006056 ORTHO05D007136 1.7e-50 203.8 269 47.6
Carub.0003s0627 Capsella rubella HOM05D006056 ORTHO05D007136 2.2e-50 203.4 262 46.9
Nn7g36738 Nelumbo nucifera HOM05D006056 ORTHO05D007136 2.2e-50 203.4 263 44.5
Nitab4.5_0005808g0070 Nicotiana tabacum HOM05D006056 ORTHO05D007136 3.7e-50 202.6 251 47.8
Glyma.11G156500 Glycine max HOM05D006056 ORTHO05D007136 6.3e-50 201.8 270 44.8
Actinidia06230 Actinidia chinensis HOM05D006056 ORTHO05D007136 8.3e-50 201.4 255 47.8
PSO384G1577 Papaver somniferum HOM05D006056 ORTHO05D007136 1.4e-49 200.7 240 49.2
BcaC09g47915 Brassica carinata HOM05D006056 ORTHO05D007136 2.4e-49 199.9 204 52.5
Migut.B01239 Erythranthe guttata HOM05D006056 ORTHO05D007136 2.4e-49 199.9 253 47.0
Nitab4.5_0003481g0070 Nicotiana tabacum HOM05D006056 ORTHO05D007136 2.4e-49 199.9 251 47.4
TPR.G1448 Trifolium pratense HOM05D006056 ORTHO05D007136 3.1e-49 199.5 261 45.6
Cc08_g11260 Coffea canephora HOM05D006056 ORTHO05D007136 4.1e-49 199.1 255 47.5
Lsat_1_v5_gn_9_40260 Lactuca sativa HOM05D006056 ORTHO05D007136 4.1e-49 199.1 229 49.3
PSO339G3509 Papaver somniferum HOM05D006056 ORTHO05D007136 4.1e-49 199.1 265 46.8
BolC1t05590H Brassica oleracea HOM05D006056 ORTHO05D007136 5.4e-49 198.7 204 52.5
HanXRQChr11g0341201 Helianthus annuus HOM05D006056 ORTHO05D007136 7.0e-49 198.4 247 47.4
CSS0027846 Camellia sinensis var. sinensis HOM05D006056 ORTHO05D007136 1.2e-48 197.6 235 48.9
Ca_12968_v3 Cicer arietinum L. HOM05D006056 ORTHO05D007136 3.5e-48 196.1 206 52.9
vmacro13759 Vaccinium macrocarpon HOM05D006056 ORTHO05D007136 3.5e-48 196.1 246 45.5
SGA_v2.0_scaffold124G33607 Striga asiatica HOM05D006056 ORTHO05D007136 4.5e-48 195.7 212 49.1
MSTRG.16982 Avicennia marina HOM05D006056 ORTHO05D007136 5.9e-48 195.3 243 46.1
Peaxi162Scf00082g00120 Petunia axillaris HOM05D006056 ORTHO05D007136 1.7e-47 193.7 225 48.9
Aa31LG5G17320 Aethionema arabicum HOM05D006056 ORTHO05D007136 3.8e-47 192.6 262 46.6
Gohir.A10G186600 Gossypium hirsutum HOM05D006056 ORTHO05D007136 3.8e-47 192.6 261 47.5
Glyma.04G135300 Glycine max HOM05D006056 ORTHO05D007136 5.0e-47 192.2 250 45.6
PGSC0003DMG400005407 Solanum tuberosum HOM05D006056 ORTHO05D007136 5.0e-47 192.2 223 50.7
Nn2g14790 Nelumbo nucifera HOM05D006056 ORTHO05D007136 6.5e-47 191.8 244 46.3
Sopen01g040210 Solanum pennellii HOM05D006056 ORTHO05D007136 6.5e-47 191.8 252 46.4
CAN.G1045.19 Capsicum annuum HOM05D006056 ORTHO05D007136 8.5e-47 191.4 221 49.3
Hma1.2p1_0837F.1_g226040 Hydrangea macrophylla HOM05D006056 ORTHO05D007136 1.1e-46 191.0 199 52.3
Hund13373 Selenicereus undatus HOM05D006056 ORTHO05D007136 1.5e-46 190.7 233 47.2
Solyc01g096480.2 Solanum lycopersicum HOM05D006056 ORTHO05D007136 2.5e-46 189.9 252 46.0
Rhsim07G0067800 Rhododendron simsii HOM05D006056 ORTHO05D007136 1.0e-44 184.5 227 45.4
CDE05G0697 Ceratophyllum demersum HOM05D006056 ORTHO05D007136 3.0e-44 183.0 237 45.6
unitig_736.g22224 Utricularia gibba HOM05D006056 ORTHO05D007136 1.4e-41 174.1 229 43.7
CARHR081330 Cardamine hirsuta HOM05D006056 ORTHO05D007136 1.7e-39 167.2 182 51.1
MBI13_g23031_MAGBIO Magnolia biondii HOM05D006056 ORTHO05D007136 2.9e-39 166.4 247 40.5
Medtr1g037680 Medicago truncatula HOM05D006056 ORTHO05D007136 1.1e-38 164.5 182 51.1
ATR0782G243 Amborella trichopoda HOM05D006056 ORTHO05D007136 1.9e-38 163.7 229 44.1
ECA248G1356 Erigeron canadensis HOM05D006056 ORTHO05D007136 2.5e-38 163.3 220 45.5
Os08g0378900 Oryza sativa ssp. japonica HOM05D006056 ORTHO05D007136 4.3e-38 162.5 195 45.1
Aqoxy1G00370 Aquilegia oxysepala HOM05D006056 ORTHO05D007136 4.0e-36 156.0 257 40.5
HPP92_023300 Vanilla planifolia HOM05D002937 ORTHO05D003063 4.0e-36 156.0 207 43.5
Lj9A658G61 Lonicera japonica HOM05D006056 ORTHO05D007136 5.2e-36 155.6 182 47.3
HPP92_023265 Vanilla planifolia HOM05D002937 ORTHO05D003063 1.2e-35 154.5 201 43.8
Medtr3g014240 Medicago truncatula HOM05D006056 ORTHO05D007136 1.6e-32 144.1 228 41.2
Sc10g0004470 Simmondsia chinensis HOM05D006056 ORTHO05D007136 3.0e-31 139.8 203 43.3
VMungo1080G1125 Vigna mungo HOM05D006056 ORTHO05D007136 3.6e-29 132.9 127 58.3
AUR62026890 Chenopodium quinoa HOM05D006056 ORTHO05D007136 1.2e-27 127.9 195 41.5
Hma1.2p1_0837F.1_g226030 Hydrangea macrophylla HOM05D006056 ORTHO05D007136 1.5e-27 127.5 166 45.2
Cc00_g27250 Coffea canephora HOM05D006056 ORTHO05D007136 8.3e-26 121.7 118 56.8
Pp3c1_18440 Physcomitrium patens HOM05D006056 ORTHO05D007136 1.1e-25 121.3 185 36.2
TAR633G2798 Trochodendron aralioides HOM05D006056 ORTHO05D007136 3.5e-24 116.3 71 77.5
Dinv32019 Davidia involucrata HOM05D006056 ORTHO05D007136 4.6e-24 115.9 81 70.4
COL.COLO4_20678 Corchorus olitorius HOM05D006056 ORTHO05D007136 6.0e-24 115.5 66 83.3
MD05G1114000 Malus domestica HOM05D006056 ORTHO05D007136 6.0e-24 115.5 73 72.6
Actinidia12748 Actinidia chinensis HOM05D006056 ORTHO05D007136 2.5e-22 110.2 215 37.7
AagrBONN_evm.TU.Sc2ySwM_117.3107 Anthoceros agrestis HOM05D006056 ORTHO05D007136 2.5e-22 110.2 188 35.1
SalBow6G0599 Salvia bowleyana HOM05D006056 ORTHO05D007136 8.1e-21 105.1 90 57.8
CBR_g51450 Chara braunii HOM05D006056 ORTHO05D007136 2.3e-20 103.6 187 32.6
Zm00001eb042600 Zea mays HOM05D006056 ORTHO05D007136 4.0e-20 102.8 187 35.3
Gorai.011G216500 Gossypium raimondii HOM05D006056 ORTHO05D007136 5.2e-20 102.4 70 70.0
Mapoly0006s0285 Marchantia polymorpha HOM05D006056 ORTHO05D007136 1.2e-19 101.3 184 31.5
SMO146G0323 Selaginella moellendorffii HOM05D006056 ORTHO05D007136 2.9e-18 96.7 185 32.4
Sed0006964 Sechium edule HOM05D006056 ORTHO05D007136 1.4e-17 94.4 66 72.7
MCO07G215 Micromonas commoda HOM05D006056 ORTHO05D007136 9.2e-17 91.7 189 31.2
SEGI_00494 Sequoiadendron giganteum HOM05D006056 ORTHO05D007136 6.8e-12 75.5 54 55.6
Pp3c4_27660 Physcomitrium patens HOM05D006056 ORTHO05D007136 7.6e-11 72.0 65 50.8
Cre02.g142800 Chlamydomonas reinhardtii HOM05D006056 ORTHO05D007136 3.2e-09 66.6 178 23.6


User provided reference genes

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