Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra01G0016900 Salix brachista HOM05D007435 ORTHO05D009338 9.6e-147 523.5 264 100.0
Potri.001G022500 Populus trichocarpa HOM05D007435 ORTHO05D009338 1.6e-37 160.6 91 92.3
Manes.11G002100 Manihot esculenta HOM05D007435 ORTHO05D009338 1.0e-18 98.2 82 65.9
CiPaw.13G009600 Carya illinoinensis HOM05D007435 ORTHO05D009338 4.9e-18 95.9 81 65.4
Haze_03106 Corylus avellana HOM05D007435 ORTHO05D009338 9.3e-17 91.7 77 63.6
QL04p012434 Quercus lobata HOM05D007435 ORTHO05D009338 1.3e-15 87.8 79 63.3
COL.COLO4_19345 Corchorus olitorius HOM05D007435 ORTHO05D009338 3.0e-15 86.7 88 56.8
Thecc.10G004500 Theobroma cacao HOM05D007435 ORTHO05D009338 6.7e-15 85.5 87 57.5
Cfa010840 Carpinus fangiana HOM05D007435 ORTHO05D009338 1.1e-14 84.7 77 59.7
CANSAT80G0490 Cannabis sativa HOM05D007435 ORTHO05D009338 1.5e-14 84.3 86 58.1
Prupe.2G027100 Prunus persica HOM05D007435 ORTHO05D009338 1.5e-14 84.3 85 54.1
TWI63G0886 Tripterygium wilfordii HOM05D007435 ORTHO05D009338 1.5e-14 84.3 79 62.0
FvH4_7g02100 Fragaria vesca HOM05D007435 ORTHO05D009338 1.9e-14 84.0 86 51.2
QL04p013057 Quercus lobata HOM05D007435 ORTHO05D009338 1.9e-14 84.0 79 62.0
Cpa.g.sc197.17 Carica papaya HOM05D007435 ORTHO05D009338 1.3e-13 81.3 94 56.4
FAN03G1772 Fragaria x ananassa HOM05D007435 ORTHO05D009338 2.8e-13 80.1 76 57.9
Duzib114G0226 Durio zibethinus HOM05D007435 ORTHO05D009338 8.2e-13 78.6 84 56.0
MD07G1027000 Malus domestica HOM05D007435 ORTHO05D009338 1.1e-12 78.2 91 51.6
Haze_19805 Corylus avellana HOM05D007435 ORTHO05D009338 1.4e-12 77.8 69 63.8
Duzib128G0703 Durio zibethinus HOM05D007435 ORTHO05D009338 1.4e-12 77.8 82 54.9
PGR031G0502 Punica granatum HOM05D007435 ORTHO05D009338 1.8e-12 77.4 85 52.9
TAR065G0004 Trochodendron aralioides HOM05D007435 ORTHO05D009338 1.8e-12 77.4 81 55.6
Dinv32059 Davidia involucrata HOM05D007435 ORTHO05D009338 6.9e-12 75.5 91 50.5
Actinidia21528 Actinidia chinensis HOM05D007435 ORTHO05D009338 1.5e-11 74.3 77 53.2
MELO3C005141.2 Cucumis melo HOM05D007435 ORTHO05D009338 4.5e-11 72.8 87 48.3
MD02G1297000 Malus domestica HOM05D007435 ORTHO05D009338 4.5e-11 72.8 87 50.6
RcHm_v2.0_Chr1g0319401 Rosa chinensis HOM05D007435 ORTHO05D009338 5.9e-11 72.4 86 53.5
unitig_578.g16053 Utricularia gibba HOM05D007435 ORTHO05D009338 7.6e-11 72.0 63 61.9
Actinidia02252 Actinidia chinensis HOM05D007435 ORTHO05D009338 1.0e-10 71.6 78 50.0
ClCG01G007560 Citrullus lanatus HOM05D007435 ORTHO05D009338 1.3e-10 71.2 85 48.2
Nn7g36439 Nelumbo nucifera HOM05D007435 ORTHO05D009338 1.3e-10 71.2 77 51.9
Hund13323 Selenicereus undatus HOM05D000185 ORTHO05D000105 1.3e-10 71.2 77 51.9
vmacro19756 Vaccinium macrocarpon HOM05D007435 ORTHO05D009338 1.3e-10 71.2 79 53.2
TAR369G0027 Trochodendron aralioides HOM05D007435 ORTHO05D009338 1.7e-10 70.9 81 54.3
Atru.chr11.2511 Acer truncatum HOM05D007435 ORTHO05D009338 2.2e-10 70.5 95 47.4
Migut.N01821 Erythranthe guttata HOM05D007435 ORTHO05D009338 2.2e-10 70.5 55 61.8
Hma1.2p1_0269F.1_g107800 Hydrangea macrophylla HOM05D007435 ORTHO05D009338 5.0e-10 69.3 101 42.6
CsaV3_5G024570 Cucumis sativus L. HOM05D007435 ORTHO05D009338 6.5e-10 68.9 87 46.0
AL343U10010 Arabidopsis lyrata HOM05D007435 ORTHO05D009338 8.5e-10 68.6 91 47.3
AT4G31560 Arabidopsis thaliana HOM05D007435 ORTHO05D009338 1.4e-09 67.8 92 46.7
Carub.0007s0901 Capsella rubella HOM05D007435 ORTHO05D009338 1.4e-09 67.8 51 66.7
THA.LOC104826709 Tarenaya hassleriana HOM05D007435 ORTHO05D009338 1.4e-09 67.8 65 56.9
SGA_v2.0_scaffold354G49740 Striga asiatica HOM05D007435 ORTHO05D009338 2.5e-09 67.0 63 57.1
A03p60860 Brassica napus HOM05D007435 ORTHO05D009338 3.2e-09 66.6 92 45.7
BraA03t15122Z Brassica rapa HOM05D007435 ORTHO05D009338 3.2e-09 66.6 92 45.7
CSS0019859 Camellia sinensis var. sinensis HOM05D007435 ORTHO05D009338 3.2e-09 66.6 83 48.2
Lalb_Chr25g0282731 Lupinus albus HOM05D007435 ORTHO05D009338 3.2e-09 66.6 70 57.1
Eucgr.G03266 Eucalyptus grandis HOM05D007435 ORTHO05D009338 4.2e-09 66.2 84 48.8
Potri.003G203300 Populus trichocarpa HOM05D007435 ORTHO05D009338 4.2e-09 66.2 44 79.5
SalBow6G1324 Salvia bowleyana HOM05D007435 ORTHO05D009338 5.5e-09 65.9 50 66.0
Ca_27018_v3 Cicer arietinum L. HOM05D007435 ORTHO05D009338 7.2e-09 65.5 53 62.3
Rhsim05G0126700 Rhododendron simsii HOM05D007435 ORTHO05D009338 7.2e-09 65.5 54 57.4
Thhalv10026511m.g Eutrema salsugineum HOM05D007435 ORTHO05D009338 9.3e-09 65.1 51 62.7
A01p06670 Brassica napus HOM05D005366 ORTHO05D006323 1.2e-08 64.7 86 47.7
BraA01t00625Z Brassica rapa HOM05D005366 ORTHO05D006323 1.2e-08 64.7 86 47.7
Dinv03572 Davidia involucrata HOM05D007435 ORTHO05D009338 1.2e-08 64.7 52 59.6
Dinv05039 Davidia involucrata HOM05D007435 ORTHO05D009338 1.2e-08 64.7 52 59.6
Lj3g0014273 Lotus japonicus HOM05D007435 ORTHO05D009338 1.6e-08 64.3 72 50.0
AUR62026808 Chenopodium quinoa HOM05D007435 ORTHO05D009338 2.1e-08 63.9 86 45.3
Ciclev10032994m.g Citrus clementina HOM05D007435 ORTHO05D009338 3.6e-08 63.2 52 63.5
BcaNung01514 Brassica carinata HOM05D007435 ORTHO05D009338 4.6e-08 62.8 51 60.8
Gohir.A10G239300 Gossypium hirsutum HOM05D007435 ORTHO05D009338 4.6e-08 62.8 44 72.7
Gohir.D10G251200 Gossypium hirsutum HOM05D007435 ORTHO05D009338 4.6e-08 62.8 44 72.7
Gorai.011G291600 Gossypium raimondii HOM05D007435 ORTHO05D009338 4.6e-08 62.8 44 72.7
PGSC0003DMG401006753 Solanum tuberosum HOM05D007435 ORTHO05D009338 4.6e-08 62.8 53 60.4
Sp7g29390 Schrenkiella parvula HOM05D007435 ORTHO05D009338 6.1e-08 62.4 88 43.2
BcaC09g51937 Brassica carinata HOM05D007435 ORTHO05D009338 7.9e-08 62.0 55 58.2
BcaNung04129 Brassica carinata HOM05D007435 ORTHO05D009338 7.9e-08 62.0 94 44.7
C01p07440 Brassica napus HOM05D007435 ORTHO05D009338 7.9e-08 62.0 55 58.2
BolC1t00726H Brassica oleracea HOM05D007435 ORTHO05D009338 7.9e-08 62.0 55 58.2
CDE08G0963 Ceratophyllum demersum HOM05D000584 ORTHO05D009338 7.9e-08 62.0 87 48.3
Sed0015818 Sechium edule HOM05D007435 ORTHO05D009338 7.9e-08 62.0 85 42.4
AUR62037244 Chenopodium quinoa HOM05D007435 ORTHO05D009338 1.0e-07 61.6 96 41.7
DCAR_009211 Daucus carota HOM05D007435 ORTHO05D009338 1.0e-07 61.6 51 56.9
Ah.10g030920 Amaranthus hybridus HOM05D007435 ORTHO05D009338 1.3e-07 61.2 55 58.2
CDE06G1029 Ceratophyllum demersum HOM05D007435 ORTHO05D009338 1.3e-07 61.2 85 44.7
ECA248G3437 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.3e-07 61.2 54 61.1
Solyc01g068190.3 Solanum lycopersicum HOM05D007435 ORTHO05D009338 1.3e-07 61.2 53 58.5
Sopen01g030130 Solanum pennellii HOM05D007435 ORTHO05D009338 1.3e-07 61.2 53 58.5
C07p58750 Brassica napus HOM05D007435 ORTHO05D009338 1.8e-07 60.8 92 42.4
BolC7t46323H Brassica oleracea HOM05D007435 ORTHO05D009338 1.8e-07 60.8 92 42.4
Medtr3g023160 Medicago truncatula HOM05D007435 ORTHO05D009338 1.8e-07 60.8 51 60.8
Nitab4.5_0001775g0080 Nicotiana tabacum HOM05D007435 ORTHO05D009338 1.8e-07 60.8 53 60.4
HanXRQChr01g0020861 Helianthus annuus HOM05D007435 ORTHO05D009338 2.3e-07 60.5 52 61.5
Psat5g213320 Pisum sativum HOM05D007435 ORTHO05D009338 2.3e-07 60.5 92 43.5
CARHR239440 Cardamine hirsuta HOM05D007435 ORTHO05D009338 3.0e-07 60.1 92 42.4
Sc10g0004150 Simmondsia chinensis HOM05D007435 ORTHO05D009338 3.0e-07 60.1 82 45.1
MBI13_g04786_MAGBIO Magnolia biondii HOM05D007435 ORTHO05D009338 6.7e-07 58.9 68 55.9
PSO339G5565 Papaver somniferum HOM05D007435 ORTHO05D009338 6.7e-07 58.9 48 58.3
Aa31LG2G18760 Aethionema arabicum HOM05D007435 ORTHO05D009338 1.1e-06 58.2 51 56.9
Nitab4.5_0000316g0230 Nicotiana tabacum HOM05D002000 ORTHO05D002027 1.1e-06 58.2 54 57.4
Lsat_1_v5_gn_1_100400 Lactuca sativa HOM05D007435 ORTHO05D009338 1.9e-06 57.4 52 57.7
Peaxi162Scf00087g00129 Petunia axillaris HOM05D007435 ORTHO05D009338 9.7e-06 55.1 46 63.0


User provided reference genes

Program Settings