Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra01G0000900 Salix brachista HOM05D007298 ORTHO05D009226 2.7e-166 588.6 291 100.0
Potri.001G001000 Populus trichocarpa HOM05D007298 ORTHO05D009226 6.2e-131 471.1 275 86.2
Thecc.03G118900 Theobroma cacao HOM05D007298 ORTHO05D009226 1.0e-88 330.9 293 61.1
COL.COLO4_37432 Corchorus olitorius HOM05D007298 ORTHO05D009226 8.8e-85 317.8 300 59.7
Cfa009528 Carpinus fangiana HOM05D007298 ORTHO05D009226 8.3e-83 311.2 297 60.9
Duzib205G1649 Durio zibethinus HOM05D007298 ORTHO05D009226 2.0e-81 306.6 291 59.8
Gohir.A12G186800 Gossypium hirsutum HOM05D007298 ORTHO05D009226 2.5e-79 299.7 294 58.8
CiPaw.13G179900 Carya illinoinensis HOM05D007298 ORTHO05D009226 5.5e-79 298.5 293 61.1
Gohir.D12G189800 Gossypium hirsutum HOM05D007298 ORTHO05D009226 5.5e-79 298.5 294 58.5
Gorai.008G203600 Gossypium raimondii HOM05D007298 ORTHO05D009226 3.6e-78 295.8 294 57.8
vmacro16084 Vaccinium macrocarpon HOM05D007298 ORTHO05D009226 5.7e-76 288.5 299 57.5
Actinidia30606 Actinidia chinensis HOM05D007298 ORTHO05D009226 5.9e-73 278.5 288 55.2
MBI13_g02430_MAGBIO Magnolia biondii HOM05D007298 ORTHO05D009226 1.0e-72 277.7 288 55.9
ClCG06G017280 Citrullus lanatus HOM05D007298 ORTHO05D009226 2.9e-72 276.2 280 57.9
CsaV3_1G001220 Cucumis sativus L. HOM05D007298 ORTHO05D009226 1.6e-70 270.4 280 56.8
Hma1.2p1_1436F.1_g283160 Hydrangea macrophylla HOM05D007298 ORTHO05D009226 1.6e-70 270.4 293 55.3
MELO3C026268.2 Cucumis melo HOM05D007298 ORTHO05D009226 2.1e-70 270.0 280 56.8
TWI32G0891 Tripterygium wilfordii HOM05D007298 ORTHO05D009226 2.8e-70 269.6 277 57.0
Haze_22918 Corylus avellana HOM05D007298 ORTHO05D009226 1.0e-69 267.7 293 56.3
Rhsim12G0097800 Rhododendron simsii HOM05D007298 ORTHO05D009226 1.4e-69 267.3 278 55.0
Sed0017427 Sechium edule HOM05D007298 ORTHO05D009226 1.4e-69 267.3 289 54.7
CSS0015764 Camellia sinensis var. sinensis HOM05D007298 ORTHO05D009226 5.7e-68 261.9 289 53.3
TAR623G1587 Trochodendron aralioides HOM05D007298 ORTHO05D009226 5.4e-66 255.4 280 53.2
Lalb_Chr16g0383911 Lupinus albus HOM05D007298 ORTHO05D009226 1.6e-65 253.8 289 51.9
Nn2g15906 Nelumbo nucifera HOM05D007298 ORTHO05D009226 4.5e-65 252.3 309 52.8
Lj4g0005920 Lotus japonicus HOM05D007298 ORTHO05D009226 1.3e-64 250.8 294 51.0
Cc11_g17470 Coffea canephora HOM05D007298 ORTHO05D009226 2.5e-63 246.5 296 51.7
Psat7g113280 Pisum sativum HOM05D007298 ORTHO05D009226 4.3e-63 245.7 296 50.0
Phvul.002G230700 Phaseolus vulgaris HOM05D007298 ORTHO05D009226 7.3e-63 245.0 292 51.7
TPR.G16338 Trifolium pratense HOM05D007298 ORTHO05D009226 1.2e-62 244.2 297 49.5
Lalb_Chr09g0327771 Lupinus albus HOM05D007298 ORTHO05D009226 1.6e-62 243.8 291 51.5
Peaxi162Scf00128g01770 Petunia axillaris HOM05D007298 ORTHO05D009226 2.8e-62 243.0 294 49.3
Aqoxy2G04036 Aquilegia oxysepala HOM05D007298 ORTHO05D009226 6.1e-62 241.9 290 51.0
QL01p007822 Quercus lobata HOM05D007298 ORTHO05D009226 6.1e-62 241.9 285 51.2
VMungo0251G1522 Vigna mungo HOM05D007298 ORTHO05D009226 8.0e-62 241.5 286 51.4
Medtr4g088515 Medicago truncatula HOM05D000062 ORTHO05D000043 1.0e-61 241.1 283 51.2
Nitab4.5_0007554g0010 Nicotiana tabacum HOM05D007298 ORTHO05D009226 1.5e-60 237.3 297 47.8
Lalb_Chr05g0218531 Lupinus albus HOM05D007298 ORTHO05D009226 2.9e-59 233.0 285 50.9
Glyma.07G199400 Glycine max HOM05D007298 ORTHO05D009226 3.2e-58 229.6 300 48.0
Nitab4.5_0008442g0010 Nicotiana tabacum HOM05D007298 ORTHO05D009226 5.4e-58 228.8 298 45.6
Glyma.13G177000 Glycine max HOM05D007298 ORTHO05D009226 7.0e-58 228.4 302 46.7
Ca_18576_v3 Cicer arietinum L. HOM05D007298 ORTHO05D009226 3.5e-57 226.1 290 48.6
Nn7g35796 Nelumbo nucifera HOM05D007298 ORTHO05D009226 3.5e-57 226.1 288 49.0
Manes.15G111000 Manihot esculenta HOM05D007298 ORTHO05D009226 1.3e-56 224.2 298 48.3
PGR119G1464 Punica granatum HOM05D007298 ORTHO05D009226 6.6e-56 221.9 288 51.7
Eucgr.J01725 Eucalyptus grandis HOM05D007298 ORTHO05D009226 1.9e-55 220.3 302 48.0
Nitab4.5_0001600g0070 Nicotiana tabacum HOM05D005538 ORTHO05D007055 7.3e-55 218.4 282 48.2
PGSC0003DMG400025413 Solanum tuberosum HOM05D007298 ORTHO05D009226 9.5e-55 218.0 295 48.1
Actinidia09612 Actinidia chinensis HOM05D007298 ORTHO05D009226 1.4e-53 214.2 284 49.6
Migut.K01030 Erythranthe guttata HOM05D007298 ORTHO05D009226 5.2e-53 212.2 272 47.8
arahy.Tifrunner.gnm1.ann1.IS7ZQD Arachis hypogaea HOM05D002349 ORTHO05D002464 2.6e-52 209.9 299 46.5
arahy.Tifrunner.gnm1.ann1.MB6W4F Arachis hypogaea HOM05D002349 ORTHO05D002464 2.6e-52 209.9 299 46.5
Ciclev10017525m.g Citrus clementina HOM05D007298 ORTHO05D009226 4.4e-52 209.1 251 52.2
Cpa.g.sc119.13 Carica papaya HOM05D007298 ORTHO05D009226 1.7e-51 207.2 274 48.9
Sopen05g018720 Solanum pennellii HOM05D007298 ORTHO05D009226 1.7e-48 197.2 284 44.4
THA.LOC104813474 Tarenaya hassleriana HOM05D007298 ORTHO05D009226 3.0e-48 196.4 311 44.1
MD11G1000700 Malus domestica HOM05D007298 ORTHO05D009226 5.1e-48 195.7 287 46.0
Dinv31519 Davidia involucrata HOM05D007298 ORTHO05D009226 1.1e-47 194.5 259 52.1
RcHm_v2.0_Chr5g0084091 Rosa chinensis HOM05D007298 ORTHO05D009226 2.5e-47 193.4 367 39.0
AT4G26415 Arabidopsis thaliana HOM05D007298 ORTHO05D009226 4.7e-46 189.1 315 42.5
Sc05g0003880 Simmondsia chinensis HOM05D007298 ORTHO05D009226 4.7e-46 189.1 303 43.9
Solyc05g024020.1 Solanum lycopersicum HOM05D007298 ORTHO05D009226 6.2e-46 188.7 280 44.3
Carub.0007s1454 Capsella rubella HOM05D007298 ORTHO05D009226 8.1e-46 188.3 312 42.6
Sp7g24320 Schrenkiella parvula HOM05D007298 ORTHO05D009226 1.1e-45 188.0 310 43.2
FvH4_3g45980 Fragaria vesca HOM05D007298 ORTHO05D009226 1.8e-45 187.2 328 40.5
FAN16G2589 Fragaria x ananassa HOM05D007298 ORTHO05D009226 3.1e-45 186.4 325 41.2
Prupe.6G001000 Prunus persica HOM05D007298 ORTHO05D009226 4.4e-44 182.6 325 39.1
Sed0020092 Sechium edule HOM05D007298 ORTHO05D009226 5.8e-44 182.2 227 49.8
Duzib084G1143 Durio zibethinus HOM05D007298 ORTHO05D009226 7.5e-44 181.8 213 53.1
C07p54880 Brassica napus HOM05D007298 ORTHO05D009226 1.7e-43 180.6 315 41.6
BolC7t45976H Brassica oleracea HOM05D007298 ORTHO05D009226 1.7e-43 180.6 315 41.6
AUR62008624 Chenopodium quinoa HOM05D007298 ORTHO05D009226 1.7e-43 180.6 253 47.0
AL7G26540 Arabidopsis lyrata HOM05D007298 ORTHO05D009226 6.4e-43 178.7 296 41.9
A03p56680 Brassica napus HOM05D007298 ORTHO05D009226 8.3e-43 178.3 314 41.1
BraA03t14738Z Brassica rapa HOM05D007298 ORTHO05D009226 8.3e-43 178.3 314 41.1
BcaC06g32750 Brassica carinata HOM05D007298 ORTHO05D009226 2.4e-42 176.8 294 42.5
CANSAT11G1103 Cannabis sativa HOM05D007298 ORTHO05D009226 2.4e-42 176.8 250 49.6
Lsat_1_v5_gn_4_2201 Lactuca sativa HOM05D007298 ORTHO05D009226 1.2e-41 174.5 288 41.7
Thhalv10026008m.g Eutrema salsugineum HOM05D007298 ORTHO05D009226 2.1e-41 173.7 288 40.6
SGA_v2.0_scaffold9G04794 Striga asiatica HOM05D002076 ORTHO05D002087 4.6e-41 172.6 287 38.3
ATR0068G085 Amborella trichopoda HOM05D007298 ORTHO05D009226 1.0e-40 171.4 336 39.0
AUR62033147 Chenopodium quinoa HOM05D007298 ORTHO05D009226 2.3e-40 170.2 240 46.2
EL10Ac4g07728 Beta vulgaris HOM05D007298 ORTHO05D009226 8.6e-40 168.3 238 45.8
FAN21G1139 Fragaria x ananassa HOM05D007298 ORTHO05D009226 8.6e-40 168.3 316 38.9
CARHR233970 Cardamine hirsuta HOM05D007298 ORTHO05D009226 1.1e-39 167.9 300 41.3
FAN11G2203 Fragaria x ananassa HOM05D007298 ORTHO05D009226 1.1e-39 167.9 312 39.4
Hma1.2p1_0459F.1_g157260 Hydrangea macrophylla HOM05D007298 ORTHO05D009226 4.3e-39 166.0 241 47.7
FAN25G2175 Fragaria x ananassa HOM05D007298 ORTHO05D009226 7.3e-39 165.2 268 42.5
BcaNung02423 Brassica carinata HOM05D007298 ORTHO05D009226 1.6e-38 164.1 306 40.5
DCAR_006996 Daucus carota HOM05D007298 ORTHO05D009226 4.7e-38 162.5 260 43.5
Ah.08g213460 Amaranthus hybridus HOM05D007298 ORTHO05D009226 4.0e-37 159.5 288 40.6
HanXRQChr12g0385721 Helianthus annuus HOM05D007298 ORTHO05D009226 6.8e-37 158.7 251 41.4
SalBow2G0405 Salvia bowleyana HOM05D007298 ORTHO05D009226 2.0e-36 157.1 269 38.7
SalBow2G1404 Salvia bowleyana HOM05D007298 ORTHO05D009226 2.0e-36 157.1 269 38.7
DCAR_006994 Daucus carota HOM05D007298 ORTHO05D009226 2.1e-33 147.1 246 42.3
Zm00001eb127960 Zea mays HOM05D007298 ORTHO05D009226 6.6e-32 142.1 226 44.2
unitig_22.g6385 Utricularia gibba HOM05D007298 ORTHO05D009226 9.6e-31 138.3 219 43.4
Glyma.15G076400 Glycine max HOM05D007298 ORTHO05D009226 1.1e-29 134.8 225 42.2
Glyma.13G237100 Glycine max HOM05D007298 ORTHO05D009226 5.1e-24 115.9 132 50.8
Phvul.006G183700 Phaseolus vulgaris HOM05D007298 ORTHO05D009226 2.9e-19 100.1 221 34.8
CDE07G0295 Ceratophyllum demersum HOM05D000114 ORTHO05D000038 3.9e-16 89.7 121 48.8
Nitab4.5_0000340g0060 Nicotiana tabacum HOM05D007298 ORTHO05D009226 1.2e-12 78.2 95 46.3
SEGI_13333 Sequoiadendron giganteum HOM05D007298 ORTHO05D009226 3.3e-07 60.1 181 30.9
C01p22270 Brassica napus HOM05D007298 ORTHO05D009226 5.7e-07 59.3 132 41.7
BcaC09g50696 Brassica carinata HOM05D007298 ORTHO05D009226 2.8e-06 57.0 51 47.1
C01p22230 Brassica napus HOM05D007298 ORTHO05D009226 2.8e-06 57.0 51 47.1
BolC1t02153H Brassica oleracea HOM05D007298 ORTHO05D009226 2.8e-06 57.0 51 47.1


User provided reference genes

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