Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO367G1261 Selaginella moellendorffii HOM05D007013 ORTHO05D008999 1.8e-221 772.3 393 100.0
Mapoly0002s0307 Marchantia polymorpha HOM05D007013 ORTHO05D008999 1.8e-85 320.5 391 45.8
Hund01977 Selenicereus undatus HOM05D007013 ORTHO05D008999 9.8e-79 298.1 371 43.9
MD11G1215400 Malus domestica HOM05D007013 ORTHO05D008999 1.8e-77 293.9 373 42.6
Nitab4.5_0005590g0010 Nicotiana tabacum HOM05D007013 ORTHO05D008999 2.4e-77 293.5 381 44.1
EL10Ac4g07781 Beta vulgaris HOM05D007013 ORTHO05D008999 4.1e-77 292.7 373 43.2
Aqoxy1G02096 Aquilegia oxysepala HOM05D007013 ORTHO05D008999 9.1e-77 291.6 361 45.7
MSTRG.14440 Avicennia marina HOM05D007013 ORTHO05D008999 9.1e-77 291.6 374 44.4
Peaxi162Scf00235g00319 Petunia axillaris HOM05D007013 ORTHO05D008999 9.1e-77 291.6 376 44.1
Thecc.07G033700 Theobroma cacao HOM05D007013 ORTHO05D008999 9.1e-77 291.6 373 43.7
Atru.chr2.3453 Acer truncatum HOM05D007013 ORTHO05D008999 1.2e-76 291.2 372 44.4
BcaB07g30535 Brassica carinata HOM05D007013 ORTHO05D008999 1.2e-76 291.2 377 41.9
CANSAT11G0669 Cannabis sativa HOM05D007013 ORTHO05D008999 1.2e-76 291.2 374 42.5
Sc16g0005930 Simmondsia chinensis HOM05D007013 ORTHO05D008999 1.2e-76 291.2 397 42.3
TWI38G0247 Tripterygium wilfordii HOM05D007013 ORTHO05D008999 2.0e-76 290.4 385 43.4
Actinidia05088 Actinidia chinensis HOM05D007013 ORTHO05D008999 5.9e-76 288.9 382 45.5
unitig_578.g16279 Utricularia gibba HOM05D001434 ORTHO05D008999 5.9e-76 288.9 388 41.8
AL3G34260 Arabidopsis lyrata HOM05D007013 ORTHO05D008999 1.0e-75 288.1 372 41.7
Ciclev10008561m.g Citrus clementina HOM05D007013 ORTHO05D008999 1.3e-75 287.7 375 43.7
MELO3C013155.2 Cucumis melo HOM05D007013 ORTHO05D008999 1.3e-75 287.7 377 42.7
vmacro02226 Vaccinium macrocarpon HOM05D007013 ORTHO05D008999 2.3e-75 287.0 374 42.8
BraA02t07867Z Brassica rapa HOM05D007013 ORTHO05D008999 2.9e-75 286.6 392 39.8
CAN.G337.80 Capsicum annuum HOM05D007013 ORTHO05D008999 5.0e-75 285.8 378 43.1
Nitab4.5_0002287g0070 Nicotiana tabacum HOM05D007013 ORTHO05D008999 6.5e-75 285.4 359 44.3
Cc05_g13940 Coffea canephora HOM05D007013 ORTHO05D008999 8.6e-75 285.0 376 41.8
Solyc07g064710.3 Solanum lycopersicum HOM05D007013 ORTHO05D008999 1.9e-74 283.9 378 42.9
Duzib213G0396 Durio zibethinus HOM05D007013 ORTHO05D008999 3.2e-74 283.1 377 41.9
FvH4_3g19730 Fragaria vesca HOM05D007013 ORTHO05D008999 3.2e-74 283.1 373 42.6
Migut.H01815 Erythranthe guttata HOM05D007013 ORTHO05D008999 4.2e-74 282.7 379 42.5
CiPaw.12G131100 Carya illinoinensis HOM05D007013 ORTHO05D008999 5.5e-74 282.3 377 43.0
C02p44890 Brassica napus HOM05D007013 ORTHO05D008999 7.2e-74 282.0 392 39.8
CsaV3_7G021910 Cucumis sativus L. HOM05D007013 ORTHO05D008999 7.2e-74 282.0 377 42.2
A02p28310 Brassica napus HOM05D007013 ORTHO05D008999 1.2e-73 281.2 368 40.8
Cfa020325 Carpinus fangiana HOM05D007013 ORTHO05D008999 1.2e-73 281.2 374 42.0
Thhalv10020871m.g Eutrema salsugineum HOM05D007013 ORTHO05D008999 1.2e-73 281.2 373 41.6
Sp2g09120 Schrenkiella parvula HOM05D007013 ORTHO05D008999 1.6e-73 280.8 377 39.8
BolC2t10525H Brassica oleracea HOM05D007013 ORTHO05D008999 3.6e-73 279.6 377 39.8
CSS0027260 Camellia sinensis var. sinensis HOM05D007013 ORTHO05D008999 3.6e-73 279.6 373 42.1
Eucgr.F03478 Eucalyptus grandis HOM05D007013 ORTHO05D008999 4.7e-73 279.3 382 41.6
PSO541G1885 Papaver somniferum HOM05D007013 ORTHO05D008999 4.7e-73 279.3 357 43.4
Oeu034036.2 Olea europaea HOM05D007013 ORTHO05D008999 8.0e-73 278.5 376 41.8
Aa31LG8G7290 Aethionema arabicum HOM05D007013 ORTHO05D008999 1.4e-72 277.7 372 40.9
Gohir.D01G068100 Gossypium hirsutum HOM05D007013 ORTHO05D008999 1.4e-72 277.7 389 40.4
Carub.0003s2044 Capsella rubella HOM05D007013 ORTHO05D008999 2.3e-72 276.9 373 39.1
Glyma.08G318300 Glycine max HOM05D007013 ORTHO05D008999 2.3e-72 276.9 373 42.4
Medtr3g052590 Medicago truncatula HOM05D007013 ORTHO05D008999 2.3e-72 276.9 376 41.8
RcHm_v2.0_Chr5g0033071 Rosa chinensis HOM05D007013 ORTHO05D008999 3.0e-72 276.6 373 41.6
Gorai.002G090100 Gossypium raimondii HOM05D007013 ORTHO05D008999 4.0e-72 276.2 389 40.4
AUR62020414 Chenopodium quinoa HOM05D007013 ORTHO05D008999 5.2e-72 275.8 341 44.3
THA.LOC104825406 Tarenaya hassleriana HOM05D007013 ORTHO05D008999 5.2e-72 275.8 378 40.2
HanXRQChr03g0076401 Helianthus annuus HOM05D007013 ORTHO05D008999 8.8e-72 275.0 397 41.8
Hma1.2p1_0036F.1_g023520 Hydrangea macrophylla HOM05D007013 ORTHO05D008999 1.2e-71 274.6 380 42.4
PSO675G8214 Papaver somniferum HOM05D007013 ORTHO05D008999 1.5e-71 274.2 358 42.2
Potri.001G418800 Populus trichocarpa HOM05D007013 ORTHO05D008999 2.0e-71 273.9 387 41.1
TAR624G0955 Trochodendron aralioides HOM05D007013 ORTHO05D008999 2.0e-71 273.9 361 42.9
Lj6g0002864 Lotus japonicus HOM05D007013 ORTHO05D008999 4.4e-71 272.7 375 41.3
Sed0023076 Sechium edule HOM05D007013 ORTHO05D008999 1.7e-70 270.8 354 41.8
Sopen07g032910 Solanum pennellii HOM05D007013 ORTHO05D008999 1.7e-70 270.8 351 43.3
Ah.06g182900 Amaranthus hybridus HOM05D007013 ORTHO05D008999 3.7e-70 269.6 387 39.5
Psat5g177160 Pisum sativum HOM05D007013 ORTHO05D008999 4.9e-70 269.2 373 40.5
QL08p009594 Quercus lobata HOM05D007013 ORTHO05D008999 6.3e-70 268.9 375 41.3
ClCG09G010880 Citrullus lanatus HOM05D007013 ORTHO05D008999 8.3e-70 268.5 376 40.7
HPP92_012407 Vanilla planifolia HOM05D007013 ORTHO05D008999 3.1e-69 266.5 379 40.4
VMungo0540G0725 Vigna mungo HOM05D007013 ORTHO05D008999 4.1e-69 266.2 382 40.1
TPR.G33766 Trifolium pratense HOM05D007013 ORTHO05D008999 9.2e-69 265.0 376 41.0
COL.COLO4_09677 Corchorus olitorius HOM05D007013 ORTHO05D008999 1.6e-68 264.2 347 42.4
ECA240G2937 Erigeron canadensis HOM05D007013 ORTHO05D008999 2.7e-68 263.5 386 40.9
Ca_14746_v3 Cicer arietinum L. HOM05D007013 ORTHO05D008999 5.9e-68 262.3 317 43.8
Nn1g07163 Nelumbo nucifera HOM05D007013 ORTHO05D008999 5.9e-68 262.3 354 40.7
Lalb_Chr18g0049881 Lupinus albus HOM05D007013 ORTHO05D008999 7.8e-68 261.9 373 38.9
GSVIVG01037670001 Vitis vinifera HOM05D007013 ORTHO05D008999 1.3e-67 261.2 377 41.4
Sabra16G0284300 Salix brachista HOM05D007013 ORTHO05D008999 2.3e-67 260.4 387 39.0
BcaC03g16648 Brassica carinata HOM05D007013 ORTHO05D008999 6.6e-67 258.8 349 39.5
DCAR_012723 Daucus carota HOM05D007013 ORTHO05D008999 1.1e-66 258.1 381 37.8
FAN16G1225 Fragaria x ananassa HOM05D007013 ORTHO05D008999 1.1e-66 258.1 373 40.8
Manes.15G070387 Manihot esculenta HOM05D007013 ORTHO05D008999 7.3e-66 255.4 319 43.9
arahy.Tifrunner.gnm1.ann1.YL2AFE Arachis hypogaea HOM05D007013 ORTHO05D008999 2.8e-65 253.4 381 38.6
Haze_09698 Corylus avellana HOM05D007013 ORTHO05D008999 6.1e-65 252.3 317 43.2
Cpa.g.sc12.289 Carica papaya HOM05D007013 ORTHO05D008999 2.3e-64 250.4 380 39.2
Lsat_1_v5_gn_9_93121 Lactuca sativa HOM05D007013 ORTHO05D008999 3.0e-64 250.0 395 40.3
Hma1.2p1_0036F.1_g023530 Hydrangea macrophylla HOM05D007013 ORTHO05D008999 2.2e-62 243.8 326 43.3
SGA_v2.0_scaffold363G49936 Striga asiatica HOM05D007013 ORTHO05D008999 6.4e-62 242.3 401 38.9
ATR0794G085 Amborella trichopoda HOM05D007013 ORTHO05D008999 2.0e-60 237.3 338 39.9
Pp3c19_1630 Physcomitrium patens HOM05D007013 ORTHO05D008999 5.0e-59 232.6 399 39.3
AT3G20480 Arabidopsis thaliana HOM05D007013 ORTHO05D008999 8.9e-56 221.9 295 40.3
Phvul.006G045700 Phaseolus vulgaris HOM05D007013 ORTHO05D008999 2.9e-54 216.9 289 42.6
SEGI_14581 Sequoiadendron giganteum HOM05D007013 ORTHO05D008999 3.5e-52 209.9 258 46.9
Prupe.4G215900 Prunus persica HOM05D007013 ORTHO05D008999 3.9e-51 206.5 385 36.1
arahy.Tifrunner.gnm1.ann1.PYQ1JD Arachis hypogaea HOM05D007013 ORTHO05D008999 2.5e-50 203.8 297 38.0
Dinv22254 Davidia involucrata HOM05D007013 ORTHO05D008999 4.7e-49 199.5 271 39.9
AagrBONN_evm.TU.Sc2ySwM_228.2947 Anthoceros agrestis HOM05D000001 ORTHO05D000003 8.1e-49 198.7 401 35.9
AUR62015801 Chenopodium quinoa HOM05D007013 ORTHO05D008999 8.1e-49 198.7 279 41.2
Rhsim06G0218600 Rhododendron simsii HOM05D007013 ORTHO05D008999 1.4e-48 198.0 265 43.4
FAN11G2199 Fragaria x ananassa HOM05D007013 ORTHO05D008999 5.2e-48 196.1 373 34.6
PGSC0003DMG400022313 Solanum tuberosum HOM05D007013 ORTHO05D008999 3.2e-45 186.8 267 40.1
Zm00001eb030850 Zea mays HOM05D007013 ORTHO05D008999 1.6e-44 184.5 236 46.6
Gohir.A01G080900 Gossypium hirsutum HOM05D007013 ORTHO05D008999 2.7e-44 183.7 242 41.3
CBR_g39764 Chara braunii HOM05D007013 ORTHO05D008999 9.5e-42 175.3 377 35.5
Lj1A874G27 Lonicera japonica HOM05D007013 ORTHO05D008999 7.8e-36 155.6 275 36.4
Os07g0102000 Oryza sativa ssp. japonica HOM05D007013 ORTHO05D008999 1.1e-32 145.2 196 41.8
CARHR096240 Cardamine hirsuta HOM05D007013 ORTHO05D008999 1.5e-26 124.8 196 34.7
Glyma.18G095300 Glycine max HOM05D007013 ORTHO05D008999 1.6e-25 121.3 220 34.5
CDE05G3055 Ceratophyllum demersum HOM05D007013 ORTHO05D008999 9.6e-18 95.5 238 28.2
FAN16G0901 Fragaria x ananassa HOM05D007013 ORTHO05D008999 1.4e-16 91.7 97 49.5
TWI34G0353 Tripterygium wilfordii HOM05D007013 ORTHO05D008999 2.1e-12 77.8 135 33.3
RcHm_v2.0_Chr4g0424981 Rosa chinensis HOM05D007013 ORTHO05D008999 1.3e-06 58.5 94 33.0


User provided reference genes

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