Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO367G1242 Selaginella moellendorffii HOM05D003886 ORTHO05D004587 4.8e-263 910.6 455 100.0
Mapoly0014s0003 Marchantia polymorpha HOM05D003886 ORTHO05D004587 5.7e-147 525.0 471 58.4
AagrBONN_evm.TU.Sc2ySwM_228.1694 Anthoceros agrestis HOM05D003886 ORTHO05D004587 2.6e-136 489.6 466 57.5
VMungo0464G1314 Vigna mungo HOM05D003886 ORTHO05D004587 3.6e-117 426.0 450 52.7
Lj2g0000910 Lotus japonicus HOM05D003886 ORTHO05D004587 5.7e-115 418.7 450 52.4
Nn7g35782 Nelumbo nucifera HOM05D003886 ORTHO05D004587 5.7e-115 418.7 459 51.4
GSVIVG01000280001 Vitis vinifera HOM05D003886 ORTHO05D004587 5.7e-115 418.7 458 51.3
QL05p085089 Quercus lobata HOM05D003886 ORTHO05D004587 1.3e-114 417.5 458 51.1
Glyma.13G045600 Glycine max HOM05D003886 ORTHO05D004587 1.7e-114 417.2 452 52.0
Glyma.19G049500 Glycine max HOM05D003886 ORTHO05D004587 1.7e-114 417.2 454 52.0
Actinidia17720 Actinidia chinensis HOM05D003886 ORTHO05D004587 2.2e-114 416.8 462 50.4
Lalb_Chr04g0257491 Lupinus albus HOM05D003886 ORTHO05D004587 2.2e-114 416.8 456 50.9
Lalb_Chr21g0317801 Lupinus albus HOM05D003886 ORTHO05D004587 2.2e-114 416.8 454 52.0
Ca_17750_v3 Cicer arietinum L. HOM05D003886 ORTHO05D004587 2.8e-114 416.4 451 51.4
Dinv30973 Davidia involucrata HOM05D003886 ORTHO05D004587 3.7e-114 416.0 451 51.9
Pp3c23_7050 Physcomitrium patens HOM05D003886 ORTHO05D004587 1.1e-113 414.5 452 52.2
CSS0041623 Camellia sinensis var. sinensis HOM05D003886 ORTHO05D004587 2.4e-113 413.3 467 50.5
Manes.15G112100 Manihot esculenta HOM05D003886 ORTHO05D004587 2.4e-113 413.3 454 51.5
Sed0016198 Sechium edule HOM05D003886 ORTHO05D004587 3.1e-113 412.9 455 51.9
Phvul.004G065600 Phaseolus vulgaris HOM05D003886 ORTHO05D004587 4.1e-113 412.5 452 51.8
TAR624G0406 Trochodendron aralioides HOM05D003886 ORTHO05D004587 9.2e-113 411.4 465 50.5
Eucgr.F04066 Eucalyptus grandis HOM05D003886 ORTHO05D004587 1.2e-112 411.0 458 50.2
PSO063G1610 Papaver somniferum HOM05D003886 ORTHO05D004587 1.2e-112 411.0 455 52.3
Sabra14G0003200 Salix brachista HOM05D003886 ORTHO05D004587 1.2e-112 411.0 473 50.7
CANSAT01G1565 Cannabis sativa HOM05D003886 ORTHO05D004587 1.6e-112 410.6 467 51.2
THA.LOC104808112 Tarenaya hassleriana HOM05D003886 ORTHO05D004587 1.6e-112 410.6 462 50.6
Atru.chr3.1841 Acer truncatum HOM05D003886 ORTHO05D004587 2.0e-112 410.2 466 50.0
CSS0008969 Camellia sinensis var. sinensis HOM05D003886 ORTHO05D004587 2.0e-112 410.2 456 51.1
Potri.014G000600 Populus trichocarpa HOM05D003886 ORTHO05D004587 2.7e-112 409.8 466 51.1
Cfa002157 Carpinus fangiana HOM05D003886 ORTHO05D004587 4.5e-112 409.1 457 50.8
MELO3C015232.2 Cucumis melo HOM05D003886 ORTHO05D004587 5.9e-112 408.7 459 51.2
MD09G1170200 Malus domestica HOM05D003886 ORTHO05D004587 5.9e-112 408.7 457 52.1
EL10Ac9g21865 Beta vulgaris HOM05D003886 ORTHO05D004587 7.8e-112 408.3 450 51.6
PSO782G4625 Papaver somniferum HOM05D003886 ORTHO05D004587 7.8e-112 408.3 455 52.1
Migut.N00997 Erythranthe guttata HOM05D003886 ORTHO05D004587 1.0e-111 407.9 450 51.6
Zm00001eb308950 Zea mays HOM05D003886 ORTHO05D004587 1.0e-111 407.9 459 50.8
arahy.Tifrunner.gnm1.ann1.Z0Z3SY Arachis hypogaea HOM05D003886 ORTHO05D004587 1.3e-111 407.5 478 49.0
AUR62016582 Chenopodium quinoa HOM05D003886 ORTHO05D004587 1.3e-111 407.5 450 51.8
CiPaw.01G092000 Carya illinoinensis HOM05D003886 ORTHO05D004587 1.7e-111 407.1 452 50.4
CsaV3_1G038140 Cucumis sativus L. HOM05D003886 ORTHO05D004587 1.7e-111 407.1 454 50.7
TAR626G1553 Trochodendron aralioides HOM05D003886 ORTHO05D004587 1.7e-111 407.1 462 50.2
Rhsim11G0111800 Rhododendron simsii HOM05D003886 ORTHO05D004587 2.3e-111 406.8 451 50.3
Gohir.D10G001000 Gossypium hirsutum HOM05D003886 ORTHO05D004587 2.9e-111 406.4 457 51.4
Gorai.011G001300 Gossypium raimondii HOM05D003886 ORTHO05D004587 2.9e-111 406.4 457 51.4
TWI75G0340 Tripterygium wilfordii HOM05D003886 ORTHO05D004587 6.6e-111 405.2 463 49.2
Actinidia11710 Actinidia chinensis HOM05D003886 ORTHO05D004587 8.6e-111 404.8 447 51.0
Gohir.A10G000800 Gossypium hirsutum HOM05D003886 ORTHO05D004587 8.6e-111 404.8 460 50.9
AUR62011474 Chenopodium quinoa HOM05D003886 ORTHO05D004587 1.1e-110 404.4 457 51.2
Lalb_Chr06g0174541 Lupinus albus HOM05D003886 ORTHO05D004587 1.1e-110 404.4 454 51.8
Thecc.06G049000 Theobroma cacao HOM05D003886 ORTHO05D004587 1.5e-110 404.1 460 50.2
Ah.01g020350 Amaranthus hybridus HOM05D003886 ORTHO05D004587 2.5e-110 403.3 456 50.2
Dinv24535 Davidia involucrata HOM05D003886 ORTHO05D004587 2.5e-110 403.3 454 50.0
Cc02_g36820 Coffea canephora HOM05D003886 ORTHO05D004587 3.3e-110 402.9 448 51.3
PGR102G2920 Punica granatum HOM05D003886 ORTHO05D004587 3.3e-110 402.9 462 49.1
MSTRG.27896 Avicennia marina HOM05D003886 ORTHO05D004587 4.3e-110 402.5 460 50.9
Manes.03G095300 Manihot esculenta HOM05D003886 ORTHO05D004587 4.3e-110 402.5 461 51.4
Nitab4.5_0013482g0010 Nicotiana tabacum HOM05D003886 ORTHO05D004587 4.3e-110 402.5 451 50.3
HanXRQChr17g0570801 Helianthus annuus HOM05D003886 ORTHO05D004587 5.6e-110 402.1 452 50.4
Prupe.3G028400 Prunus persica HOM05D003886 ORTHO05D004587 5.6e-110 402.1 465 51.0
Aa31LG4G1970 Aethionema arabicum HOM05D003886 ORTHO05D004587 7.3e-110 401.7 451 50.6
BcaB02g07192 Brassica carinata HOM05D003886 ORTHO05D004587 7.3e-110 401.7 452 50.4
MD17G1156900 Malus domestica HOM05D003886 ORTHO05D004587 9.5e-110 401.4 455 51.0
AL2G39480 Arabidopsis lyrata HOM05D003886 ORTHO05D004587 1.2e-109 401.0 448 50.9
A07p44160 Brassica napus HOM05D003886 ORTHO05D004587 1.2e-109 401.0 456 50.2
BcaC08g47466 Brassica carinata HOM05D003886 ORTHO05D004587 1.6e-109 400.6 465 50.3
BraA07t31924Z Brassica rapa HOM05D003886 ORTHO05D004587 1.6e-109 400.6 456 50.2
Sc24g0001760 Simmondsia chinensis HOM05D003886 ORTHO05D004587 2.1e-109 400.2 454 50.2
TWI12G0365 Tripterygium wilfordii HOM05D003886 ORTHO05D004587 2.1e-109 400.2 454 49.6
Sp5g34070 Schrenkiella parvula HOM05D003886 ORTHO05D004587 3.6e-109 399.4 454 50.4
Peaxi162Scf00048g01418 Petunia axillaris HOM05D003886 ORTHO05D004587 4.7e-109 399.1 455 49.9
BolC6t40307H Brassica oleracea HOM05D003886 ORTHO05D004587 6.1e-109 398.7 465 49.9
AT1G79020 Arabidopsis thaliana HOM05D003886 ORTHO05D004587 8.0e-109 398.3 450 50.7
Carub.0002s2589 Capsella rubella HOM05D003886 ORTHO05D004587 1.8e-108 397.1 452 49.1
RcHm_v2.0_Chr2g0148321 Rosa chinensis HOM05D003886 ORTHO05D004587 1.8e-108 397.1 461 49.7
Thhalv10018536m.g Eutrema salsugineum HOM05D003886 ORTHO05D004587 2.3e-108 396.7 451 50.3
FAN05G1128 Fragaria x ananassa HOM05D003886 ORTHO05D004587 2.3e-108 396.7 458 50.2
Solyc02g081650.3 Solanum lycopersicum HOM05D003886 ORTHO05D004587 2.3e-108 396.7 450 50.2
Duzib235G0758 Durio zibethinus HOM05D003886 ORTHO05D004587 3.0e-108 396.4 457 50.5
FAN09G1502 Fragaria x ananassa HOM05D003886 ORTHO05D004587 3.0e-108 396.4 458 50.2
Nitab4.5_0006794g0050 Nicotiana tabacum HOM05D003886 ORTHO05D004587 3.0e-108 396.4 451 49.9
BraA07t30377Z Brassica rapa HOM05D003886 ORTHO05D004587 4.0e-108 396.0 453 48.8
FvH4_6g36310 Fragaria vesca HOM05D003886 ORTHO05D004587 4.0e-108 396.0 458 50.4
PGSC0003DMG400017734 Solanum tuberosum HOM05D003886 ORTHO05D004587 5.2e-108 395.6 452 49.6
Oeu000173.4 Olea europaea HOM05D003886 ORTHO05D004587 8.9e-108 394.8 525 45.3
MSTRG.5179 Avicennia marina HOM05D003886 ORTHO05D004587 1.2e-107 394.4 447 50.8
C06p52890 Brassica napus HOM05D003886 ORTHO05D004587 1.2e-107 394.4 466 49.6
Ciclev10020009m.g Citrus clementina HOM05D003886 ORTHO05D004587 1.2e-107 394.4 474 48.1
FAN14G1097 Fragaria x ananassa HOM05D003886 ORTHO05D004587 1.2e-107 394.4 458 50.2
HanXRQChr17g0545561 Helianthus annuus HOM05D003886 ORTHO05D004587 1.2e-107 394.4 457 49.5
Os08g0338900 Oryza sativa ssp. japonica HOM05D003886 ORTHO05D004587 1.2e-107 394.4 458 49.8
C06p30220 Brassica napus HOM05D003886 ORTHO05D004587 2.0e-107 393.7 457 48.8
BolC6t38185H Brassica oleracea HOM05D003886 ORTHO05D004587 2.0e-107 393.7 457 48.8
Medtr8g090035 Medicago truncatula HOM05D003886 ORTHO05D004587 2.0e-107 393.7 451 50.3
Psat7g057280 Pisum sativum HOM05D003886 ORTHO05D004587 2.0e-107 393.7 458 49.8
Sopen02g026260 Solanum pennellii HOM05D003886 ORTHO05D004587 2.0e-107 393.7 450 49.8
BcaC08g45391 Brassica carinata HOM05D003886 ORTHO05D004587 2.6e-107 393.3 457 48.8
A07p27360 Brassica napus HOM05D003886 ORTHO05D004587 3.4e-107 392.9 454 49.1
A02p22460 Brassica napus HOM05D003886 ORTHO05D004587 1.7e-106 390.6 451 49.7
FAN14G2559 Fragaria x ananassa HOM05D003886 ORTHO05D004587 2.2e-106 390.2 458 50.0
HPP92_015734 Vanilla planifolia HOM05D003886 ORTHO05D004587 4.9e-106 389.0 462 49.1
CAN.G809.69 Capsicum annuum HOM05D003886 ORTHO05D004587 8.3e-106 388.3 450 49.1
Thhalv10007658m.g Eutrema salsugineum HOM05D003886 ORTHO05D004587 1.1e-105 387.9 449 49.7
vmacro01641 Vaccinium macrocarpon HOM05D003886 ORTHO05D004587 1.4e-105 387.5 486 47.7
Carub.0001s1642 Capsella rubella HOM05D003886 ORTHO05D004587 3.2e-105 386.3 453 48.8
BraA02t07251Z Brassica rapa HOM05D003886 ORTHO05D004587 4.1e-105 386.0 451 49.9
CARHR017150 Cardamine hirsuta HOM05D003886 ORTHO05D004587 7.0e-105 385.2 460 49.3
ATR0626G209 Amborella trichopoda HOM05D003886 ORTHO05D004587 2.0e-104 383.6 445 49.2
ECA234G0089 Erigeron canadensis HOM05D003886 ORTHO05D004587 2.0e-104 383.6 453 48.8
C02p36140 Brassica napus HOM05D003886 ORTHO05D004587 2.7e-104 383.3 449 48.6
Solyc02g032300.3 Solanum lycopersicum HOM05D003886 ORTHO05D004587 6.0e-104 382.1 451 48.1
Sopen02g010650 Solanum pennellii HOM05D003886 ORTHO05D004587 7.8e-104 381.7 451 48.1
Peaxi162Scf00198g01528 Petunia axillaris HOM05D003886 ORTHO05D004587 3.0e-103 379.8 450 48.9
BcaC03g15859 Brassica carinata HOM05D003886 ORTHO05D004587 1.1e-102 377.9 449 48.1
CDE02G1355 Ceratophyllum demersum HOM05D003886 ORTHO05D004587 1.9e-102 377.1 446 47.5
AL1G28850 Arabidopsis lyrata HOM05D003886 ORTHO05D004587 7.3e-102 375.2 450 48.2
AT1G16690 Arabidopsis thaliana HOM05D003886 ORTHO05D004587 2.8e-101 373.2 456 47.6
DCAR_022329 Daucus carota HOM05D003886 ORTHO05D004587 6.2e-101 372.1 457 48.1
unitig_699.g19834 Utricularia gibba HOM05D003886 ORTHO05D004587 5.2e-100 369.0 453 47.5
CDE03G0037 Ceratophyllum demersum HOM05D003886 ORTHO05D004587 8.9e-100 368.2 452 46.7
MBI14_g11787_MAGBIO Magnolia biondii HOM05D003886 ORTHO05D004587 1.5e-99 367.5 437 49.7
Oeu061917.1 Olea europaea HOM05D003886 ORTHO05D004587 1.5e-99 367.5 515 43.5
TPR.G6290 Trifolium pratense HOM05D003886 ORTHO05D004587 2.0e-99 367.1 439 49.9
Aqoxy6G00358 Aquilegia oxysepala HOM05D003886 ORTHO05D004587 2.6e-99 366.7 461 46.4
Duzib192G0492 Durio zibethinus HOM05D003886 ORTHO05D004587 6.4e-98 362.1 460 46.3
COL.COLO4_26802 Corchorus olitorius HOM05D003886 ORTHO05D004587 1.1e-97 361.3 455 47.5
Oeu010600.1 Olea europaea HOM05D003886 ORTHO05D004587 2.4e-97 360.1 451 46.1
Sp1g14830 Schrenkiella parvula HOM05D003886 ORTHO05D004587 1.7e-95 354.0 449 46.5
arahy.Tifrunner.gnm1.ann1.78GTJP Arachis hypogaea HOM05D003886 ORTHO05D004587 1.9e-94 350.5 297 62.0
Lj5C312G11 Lonicera japonica HOM05D003886 ORTHO05D004587 4.3e-94 349.4 440 48.0
Lsat_1_v5_gn_3_52161 Lactuca sativa HOM05D003886 ORTHO05D004587 5.6e-94 349.0 390 51.3
SHI31130 Sapria himalayana HOM05D003886 ORTHO05D004587 1.4e-92 344.4 465 46.5
CBR_g38268 Chara braunii HOM05D003886 ORTHO05D004587 1.7e-90 337.4 313 60.1
CDE05G0598 Ceratophyllum demersum HOM05D003886 ORTHO05D004587 1.0e-87 328.2 446 44.2
CDE06G2124 Ceratophyllum demersum HOM05D003886 ORTHO05D004587 3.9e-87 326.2 380 48.9
Pp3c16_8390 Physcomitrium patens HOM05D003886 ORTHO05D004587 1.9e-86 323.9 467 43.3
ECA246G0124 Erigeron canadensis HOM05D003886 ORTHO05D004587 2.0e-83 313.9 413 45.5
SGA_v2.0_scaffold8G04472 Striga asiatica HOM05D003886 ORTHO05D004587 1.3e-79 301.2 507 41.4
Nitab4.5_0000389g0130 Nicotiana tabacum HOM05D003886 ORTHO05D004587 2.4e-73 280.4 290 52.8
BolC2t09627H Brassica oleracea HOM05D003886 ORTHO05D004587 1.0e-71 275.0 333 47.1
ATR0751G140 Amborella trichopoda HOM05D003886 ORTHO05D004587 1.1e-68 265.0 316 49.4
Ciclev10021199m.g Citrus clementina HOM05D003886 ORTHO05D004587 5.8e-67 259.2 320 46.9
ECA228G0002 Erigeron canadensis HOM05D003886 ORTHO05D004587 1.1e-60 238.4 268 50.4
Os09g0284600 Oryza sativa ssp. japonica HOM05D003886 ORTHO05D004587 2.5e-54 217.2 217 53.5
Cpa.g.sc10.20 Carica papaya HOM05D003886 ORTHO05D004587 2.5e-49 200.7 203 54.2
PRCOL_00004606 Prasinoderma coloniale HOM05D003886 ORTHO05D004587 5.5e-49 199.5 498 34.7
MCO08G116 Micromonas commoda HOM05D003886 ORTHO05D004587 2.7e-48 197.2 323 41.5
CARHR072690 Cardamine hirsuta HOM05D003886 ORTHO05D004587 1.5e-46 191.4 202 52.0
Cre03.g196400 Chlamydomonas reinhardtii HOM05D003886 ORTHO05D004587 4.8e-45 186.4 473 31.1
HanXRQChr08g0234351 Helianthus annuus HOM05D003886 ORTHO05D004587 1.1e-44 185.3 154 60.4
PGSC0003DMG400013092 Solanum tuberosum HOM05D003886 ORTHO05D004587 2.4e-44 184.1 201 48.8
SEGI_16863 Sequoiadendron giganteum HOM05D003886 ORTHO05D004587 3.8e-42 176.8 179 50.3
Nn8g38501 Nelumbo nucifera HOM05D003886 ORTHO05D004587 3.2e-41 173.7 194 52.6
SEGI_11104 Sequoiadendron giganteum HOM05D003886 ORTHO05D004587 1.6e-40 171.4 281 41.6
ClCG03G018020 Citrullus lanatus HOM05D003886 ORTHO05D004587 1.4e-39 168.3 281 41.3
CAN.G1586.1 Capsicum annuum HOM05D003886 ORTHO05D004587 2.2e-37 161.0 235 42.6
BcaB05g25167 Brassica carinata HOM05D003886 ORTHO05D004587 3.4e-35 153.7 159 51.6
Ah.14g084510 Amaranthus hybridus HOM05D003886 ORTHO05D004587 2.9e-34 150.6 405 33.1
ATR0751G177 Amborella trichopoda HOM05D003886 ORTHO05D004587 1.5e-30 138.3 139 52.5
ClCG03G018040 Citrullus lanatus HOM05D003886 ORTHO05D004587 1.5e-30 138.3 137 54.7
Zm00001eb097400 Zea mays HOM05D003886 ORTHO05D004587 5.7e-30 136.3 213 42.3
Aqoxy6G02601 Aquilegia oxysepala HOM05D003886 ORTHO05D004587 6.1e-24 116.3 160 43.1
Cpa.g.sc10.19 Carica papaya HOM05D003886 ORTHO05D004587 1.1e-22 112.1 189 37.6
GSVIVG01024509001 Vitis vinifera HOM05D003886 ORTHO05D004587 1.1e-20 105.5 79 68.4
Haze_16250 Corylus avellana HOM05D003886 ORTHO05D004587 2.0e-19 101.3 96 56.2
MBI11_g15900_MAGBIO Magnolia biondii HOM05D003886 ORTHO05D004587 4.0e-15 87.0 77 55.8
Haze_16249 Corylus avellana HOM05D003886 ORTHO05D004587 5.7e-14 83.2 248 27.8
arahy.Tifrunner.gnm1.ann1.6KK5MR Arachis hypogaea HOM05D003886 ORTHO05D004587 1.8e-12 78.2 70 62.9
arahy.Tifrunner.gnm1.ann1.K7FQ1R Arachis hypogaea HOM05D003886 ORTHO05D019782 2.9e-10 70.9 65 60.0
Nitab4.5_0000389g0110 Nicotiana tabacum HOM05D003886 ORTHO05D004587 3.8e-10 70.5 68 45.6
arahy.Tifrunner.gnm1.ann1.RANL81 Arachis hypogaea HOM05D003886 ORTHO05D004587 8.5e-10 69.3 85 54.1
SHI49864 Sapria himalayana HOM05D003886 ORTHO05D004587 2.7e-08 64.3 51 60.8
BcaB05g25166 Brassica carinata HOM05D000912 ORTHO05D001232 1.8e-07 61.6 108 38.0
Lj5C312T17 Lonicera japonica HOM05D001538 ORTHO05D004587 4.4e-06 57.0 53 54.7
arahy.Tifrunner.gnm1.ann1.F9GSXH Arachis hypogaea HOM05D003886 ORTHO05D019782 9.8e-06 55.8 64 53.1


User provided reference genes

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