Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO367G1182 Selaginella moellendorffii HOM05D004681 ORTHO05D005541 7.1e-217 756.9 365 100.0
SMO367G0296 Selaginella moellendorffii HOM05D004681 ORTHO05D005541 6.5e-178 627.5 372 82.3
SMO230G0066 Selaginella moellendorffii HOM05D004681 ORTHO05D005541 9.7e-81 304.7 217 74.2
SMO358G0154 Selaginella moellendorffii HOM05D004681 ORTHO05D005541 7.8e-22 109.0 197 34.0
MBI13_g31546_MAGBIO Magnolia biondii HOM05D004681 ORTHO05D005541 1.6e-14 84.7 179 32.4
Pp3c12_12510 Physcomitrium patens HOM05D004681 ORTHO05D005541 4.6e-14 83.2 189 30.2
Aqoxy7G02735 Aquilegia oxysepala HOM05D004681 ORTHO05D005541 1.0e-13 82.0 180 33.3
PSO423G0181 Papaver somniferum HOM05D004681 ORTHO05D005541 1.0e-13 82.0 179 32.4
PSO079G0045 Papaver somniferum HOM05D004681 ORTHO05D005541 3.0e-13 80.5 179 30.7
Lj4g0016729 Lotus japonicus HOM05D004681 ORTHO05D005541 3.9e-13 80.1 170 32.9
Mapoly0001s0301 Marchantia polymorpha HOM05D004681 ORTHO05D005541 5.1e-13 79.7 189 29.6
Ca_21245_v3 Cicer arietinum L. HOM05D004410 ORTHO05D006134 6.6e-13 79.3 175 31.4
Pp3c4_10660 Physcomitrium patens HOM05D004681 ORTHO05D005541 8.6e-13 79.0 178 29.2
Phvul.009G237800 Phaseolus vulgaris HOM05D004681 ORTHO05D005541 1.5e-12 78.2 170 32.9
arahy.Tifrunner.gnm1.ann1.KM341F Arachis hypogaea HOM05D004681 ORTHO05D005541 1.9e-12 77.8 181 32.6
arahy.Tifrunner.gnm1.ann1.LX7F61 Arachis hypogaea HOM05D004681 ORTHO05D005541 1.9e-12 77.8 181 32.6
Peaxi162Scf00324g00718 Petunia axillaris HOM05D004681 ORTHO05D005541 4.3e-12 76.6 182 31.3
PGR044G2653 Punica granatum HOM05D004681 ORTHO05D005541 5.6e-12 76.3 173 30.6
A07p01650 Brassica napus HOM05D004681 ORTHO05D005541 1.2e-11 75.1 186 31.2
BraA07t27967Z Brassica rapa HOM05D004681 ORTHO05D005541 1.2e-11 75.1 186 31.2
HPP92_004723 Vanilla planifolia HOM05D004681 ORTHO05D005541 1.2e-11 75.1 177 31.6
Ca_02042_v3 Cicer arietinum L. HOM05D004681 ORTHO05D005541 1.6e-11 74.7 180 31.7
VMungo1309G2393 Vigna mungo HOM05D004681 ORTHO05D005541 1.6e-11 74.7 171 31.6
AT2G19080 Arabidopsis thaliana HOM05D004681 ORTHO05D005541 2.1e-11 74.3 170 32.4
Glyma.15G164000 Glycine max HOM05D004681 ORTHO05D005541 2.8e-11 73.9 168 32.7
SGA_v2.0_scaffold41G15864 Striga asiatica HOM05D004681 ORTHO05D005541 3.6e-11 73.6 175 32.0
Lj6g0005497 Lotus japonicus HOM05D004681 ORTHO05D005541 6.2e-11 72.8 170 33.5
Carub.0003s3332 Capsella rubella HOM05D004681 ORTHO05D005541 8.1e-11 72.4 170 32.4
Glyma.13G099400 Glycine max HOM05D004681 ORTHO05D005541 8.1e-11 72.4 170 30.6
AL3G52840 Arabidopsis lyrata HOM05D004681 ORTHO05D005541 1.1e-10 72.0 170 31.8
Cc06_g22600 Coffea canephora HOM05D004681 ORTHO05D005541 1.1e-10 72.0 183 30.6
TPR.G9028 Trifolium pratense HOM05D004681 ORTHO05D005541 1.1e-10 72.0 170 32.4
SalBow7G3904 Salvia bowleyana HOM05D004681 ORTHO05D005541 1.4e-10 71.6 176 31.8
Zm00001eb375500 Zea mays HOM05D004681 ORTHO05D005541 1.4e-10 71.6 178 30.3
Psat1g145840 Pisum sativum HOM05D004681 ORTHO05D005541 1.8e-10 71.2 170 31.8
C07p03410 Brassica napus HOM05D004681 ORTHO05D005541 2.4e-10 70.9 170 32.9
BolC7t40740H Brassica oleracea HOM05D004681 ORTHO05D005541 2.4e-10 70.9 170 32.9
Glyma.09G057900 Glycine max HOM05D004681 ORTHO05D005541 2.4e-10 70.9 172 33.1
Eucgr.C00132 Eucalyptus grandis HOM05D004681 ORTHO05D005541 3.1e-10 70.5 182 28.6
BcaB07g31622 Brassica carinata HOM05D004681 ORTHO05D005541 4.0e-10 70.1 170 31.8
BcaC04g22869 Brassica carinata HOM05D004681 ORTHO05D005541 4.0e-10 70.1 170 31.2
Cpa.g.sc95.29 Carica papaya HOM05D004681 ORTHO05D005541 5.2e-10 69.7 171 31.6
HanXRQChr04g0105751 Helianthus annuus HOM05D004681 ORTHO05D005541 5.2e-10 69.7 172 31.4
HanXRQChr09g0266261 Helianthus annuus HOM05D004681 ORTHO05D005541 5.2e-10 69.7 172 31.4
BcaC06g36518 Brassica carinata HOM05D004681 ORTHO05D005541 6.8e-10 69.3 170 32.4
Thhalv10022785m.g Eutrema salsugineum HOM05D004681 ORTHO05D005541 6.8e-10 69.3 177 29.9
Psat0s736g0040 Pisum sativum HOM05D004681 ORTHO05D005541 6.8e-10 69.3 177 33.3
Nitab4.5_0010281g0010 Nicotiana tabacum HOM05D004681 ORTHO05D005541 8.9e-10 68.9 182 30.2
Sp3g32480 Schrenkiella parvula HOM05D004681 ORTHO05D005541 8.9e-10 68.9 171 30.4
MSTRG.10452 Avicennia marina HOM05D004681 ORTHO05D005541 1.2e-09 68.6 172 30.8
BcaB03g16704 Brassica carinata HOM05D004681 ORTHO05D005541 1.2e-09 68.6 170 31.2
Aa31LG8G16140 Aethionema arabicum HOM05D004681 ORTHO05D005541 1.5e-09 68.2 169 32.0
A09p12190 Brassica napus HOM05D004681 ORTHO05D005541 1.5e-09 68.2 170 31.2
Ciclev10008916m.g Citrus clementina HOM05D004681 ORTHO05D005541 1.5e-09 68.2 181 30.4
Nitab4.5_0000074g0040 Nicotiana tabacum HOM05D004681 ORTHO05D005541 1.5e-09 68.2 182 29.1
C09p14440 Brassica napus HOM05D004681 ORTHO05D005541 2.0e-09 67.8 170 30.6
BraA09t36865Z Brassica rapa HOM05D004681 ORTHO05D005541 2.0e-09 67.8 170 30.6
Glyma.17G060700 Glycine max HOM05D004681 ORTHO05D005541 2.0e-09 67.8 170 30.0
HanXRQChr10g0297571 Helianthus annuus HOM05D004681 ORTHO05D005541 2.0e-09 67.8 169 31.4
Lsat_1_v5_gn_4_183080 Lactuca sativa HOM05D004681 ORTHO05D005541 2.0e-09 67.8 177 29.4
Phvul.003G142900 Phaseolus vulgaris HOM05D004681 ORTHO05D005541 2.6e-09 67.4 170 30.6
VMungo1215G0406 Vigna mungo HOM05D004681 ORTHO05D005541 3.4e-09 67.0 170 30.6
Atru.chr7.819 Acer truncatum HOM05D004681 ORTHO05D005541 4.4e-09 66.6 169 32.5
BolC9t54347H Brassica oleracea HOM05D004681 ORTHO05D005541 4.4e-09 66.6 171 31.0
Lalb_Chr15g0084091 Lupinus albus HOM05D004681 ORTHO05D005541 4.4e-09 66.6 173 28.3
Manes.14G161401 Manihot esculenta HOM05D004681 ORTHO05D005541 4.4e-09 66.6 180 28.9
SalBow7G0268 Salvia bowleyana HOM05D004681 ORTHO05D005541 4.4e-09 66.6 185 29.7
SGA_v2.0_scaffold21G09637 Striga asiatica HOM05D004681 ORTHO05D005541 5.8e-09 66.2 175 29.1
Cfa013431 Carpinus fangiana HOM05D004681 ORTHO05D005541 7.6e-09 65.9 175 29.7
Manes.04G060300 Manihot esculenta HOM05D004681 ORTHO05D005541 7.6e-09 65.9 178 28.7
Actinidia06358 Actinidia chinensis HOM05D004681 ORTHO05D005541 9.9e-09 65.5 179 29.6
AUR62033246 Chenopodium quinoa HOM05D004681 ORTHO05D005541 9.9e-09 65.5 194 30.9
Dinv25404 Davidia involucrata HOM05D004681 ORTHO05D005541 9.9e-09 65.5 173 31.2
Potri.006G077100 Populus trichocarpa HOM05D004681 ORTHO05D005541 9.9e-09 65.5 183 27.9
QL12p032381 Quercus lobata HOM05D004681 ORTHO05D005541 9.9e-09 65.5 179 27.9
Thecc.09G181200 Theobroma cacao HOM05D004681 ORTHO05D005541 1.7e-08 64.7 171 31.0
arahy.Tifrunner.gnm1.ann1.K04ERL Arachis hypogaea HOM05D004681 ORTHO05D005541 2.2e-08 64.3 172 33.7
Potri.018G145508 Populus trichocarpa HOM05D004681 ORTHO05D005541 2.2e-08 64.3 183 28.4
Lalb_Chr12g0199511 Lupinus albus HOM05D004681 ORTHO05D005541 2.9e-08 63.9 175 34.3
Medtr2g036910 Medicago truncatula HOM05D004681 ORTHO05D005541 2.9e-08 63.9 170 29.4
Hund09046 Selenicereus undatus HOM05D004681 ORTHO05D005541 2.9e-08 63.9 180 28.9
ATR0626G278 Amborella trichopoda HOM05D004681 ORTHO05D005541 3.8e-08 63.5 171 28.7
arahy.Tifrunner.gnm1.ann1.L4KBSE Arachis hypogaea HOM05D004681 ORTHO05D005541 3.8e-08 63.5 172 32.6
CAN.G1668.9 Capsicum annuum HOM05D004681 ORTHO05D005541 3.8e-08 63.5 182 28.0
TPR.G5388 Trifolium pratense HOM05D004681 ORTHO05D005541 3.8e-08 63.5 174 32.2
Duzib170G0205 Durio zibethinus HOM05D004681 ORTHO05D005541 6.4e-08 62.8 173 30.1
THA.LOC104819968 Tarenaya hassleriana HOM05D004681 ORTHO05D005541 6.4e-08 62.8 170 31.8
GSVIVG01010902001 Vitis vinifera HOM05D004681 ORTHO05D005541 6.4e-08 62.8 172 29.1
Gohir.A08G017900 Gossypium hirsutum HOM05D004681 ORTHO05D005541 8.4e-08 62.4 171 31.0
Medtr4g127630 Medicago truncatula HOM05D004681 ORTHO05D005541 8.4e-08 62.4 176 29.0
Sc14g0001370 Simmondsia chinensis HOM05D004681 ORTHO05D005541 1.1e-07 62.0 183 28.4
TWI63G0533 Tripterygium wilfordii HOM05D004681 ORTHO05D005541 1.1e-07 62.0 177 27.7
MELO3C017439.2 Cucumis melo HOM05D004681 ORTHO05D005541 1.4e-07 61.6 171 31.6
Solyc07g009320.3 Solanum lycopersicum HOM05D004681 ORTHO05D005541 1.4e-07 61.6 182 28.6
Sopen07g005070 Solanum pennellii HOM05D004681 ORTHO05D005541 1.4e-07 61.6 182 28.6
PGSC0003DMG400008514 Solanum tuberosum HOM05D004681 ORTHO05D005541 1.4e-07 61.6 182 28.6
Gohir.D08G028500 Gossypium hirsutum HOM05D004681 ORTHO05D005541 2.4e-07 60.8 171 30.4
AagrBONN_evm.TU.Sc2ySwM_228.4196 Anthoceros agrestis HOM05D004681 ORTHO05D005541 3.2e-07 60.5 184 25.0
CiPaw.08G033800 Carya illinoinensis HOM05D004681 ORTHO05D005541 4.2e-07 60.1 174 29.3
Duzib168G0714 Durio zibethinus HOM05D004681 ORTHO05D005541 4.2e-07 60.1 172 30.2
CANSAT11G1051 Cannabis sativa HOM05D004681 ORTHO05D005541 5.4e-07 59.7 169 31.4
Dinv26443 Davidia involucrata HOM05D004681 ORTHO05D005541 5.4e-07 59.7 173 30.6
Sed0004411 Sechium edule HOM05D004681 ORTHO05D005541 7.1e-07 59.3 171 30.4
CiPaw.07G195100 Carya illinoinensis HOM05D004681 ORTHO05D005541 9.3e-07 58.9 176 28.4
Oeu000976.1 Olea europaea HOM05D004681 ORTHO05D005541 9.3e-07 58.9 177 28.2
RcHm_v2.0_Chr7g0191541 Rosa chinensis HOM05D004681 ORTHO05D005541 9.3e-07 58.9 169 29.0
Actinidia22469 Actinidia chinensis HOM05D004681 ORTHO05D005541 1.2e-06 58.5 181 26.5
Migut.L01897 Erythranthe guttata HOM05D004681 ORTHO05D005541 1.2e-06 58.5 176 29.0
RcHm_v2.0_Chr4g0400191 Rosa chinensis HOM05D004681 ORTHO05D005541 1.2e-06 58.5 169 27.8
CSS0001946 Camellia sinensis var. sinensis HOM05D004681 ORTHO05D005541 1.6e-06 58.2 173 30.1
Rhsim13G0200500 Rhododendron simsii HOM05D004681 ORTHO05D005541 1.6e-06 58.2 167 28.7
CsaV3_1G031790 Cucumis sativus L. HOM05D004681 ORTHO05D005541 2.1e-06 57.8 173 31.2
unitig_578.g16069 Utricularia gibba HOM05D004681 ORTHO05D005541 2.7e-06 57.4 171 26.3
ECA232G3088 Erigeron canadensis HOM05D004681 ORTHO05D005541 4.6e-06 56.6 173 27.7
Prupe.1G079200 Prunus persica HOM05D004681 ORTHO05D005541 4.6e-06 56.6 169 27.8


User provided reference genes

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