Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO367G1105 Selaginella moellendorffii HOM05D007618 ORTHO05D009606 1.7e-68 262.7 151 100.0
Pp3c3_10700 Physcomitrium patens HOM05D007618 ORTHO05D009606 5.0e-39 164.9 168 52.4
Mapoly0032s0019 Marchantia polymorpha HOM05D007618 ORTHO05D009606 1.2e-37 160.2 170 49.4
SEGI_37348 Sequoiadendron giganteum HOM05D007618 ORTHO05D009606 1.6e-37 159.8 150 54.7
PGR142G1310 Punica granatum HOM05D007618 ORTHO05D009606 3.7e-34 148.7 170 46.5
Potri.004G204700 Populus trichocarpa HOM05D007618 ORTHO05D009606 8.2e-34 147.5 170 47.1
HanXRQChr14g0459071 Helianthus annuus HOM05D007618 ORTHO05D009606 1.1e-33 147.1 170 46.5
Potri.009G165700 Populus trichocarpa HOM05D007618 ORTHO05D009606 1.1e-33 147.1 170 47.1
Manes.04G067600 Manihot esculenta HOM05D007618 ORTHO05D009606 1.4e-33 146.7 170 47.6
Dinv14162 Davidia involucrata HOM05D007618 ORTHO05D009606 4.1e-33 145.2 170 45.9
Migut.B00014 Erythranthe guttata HOM05D007618 ORTHO05D009606 5.3e-33 144.8 170 45.9
Ciclev10029401m.g Citrus clementina HOM05D007618 ORTHO05D009606 9.1e-33 144.1 170 47.1
Nn6g31724 Nelumbo nucifera HOM05D007618 ORTHO05D009606 9.1e-33 144.1 170 47.1
Sed0023624 Sechium edule HOM05D007618 ORTHO05D009606 9.1e-33 144.1 170 47.1
FvH4_2g16570 Fragaria vesca HOM05D007618 ORTHO05D009606 1.5e-32 143.3 170 46.5
RcHm_v2.0_Chr6g0280641 Rosa chinensis HOM05D007618 ORTHO05D009606 1.5e-32 143.3 170 46.5
Sabra04G0138200 Salix brachista HOM05D007618 ORTHO05D009606 1.5e-32 143.3 170 46.5
TAR376G0137 Trochodendron aralioides HOM05D007618 ORTHO05D009606 1.5e-32 143.3 170 45.3
CANSAT64G2827 Cannabis sativa HOM05D007618 ORTHO05D009606 2.0e-32 142.9 163 48.5
Sabra09G0129500 Salix brachista HOM05D007618 ORTHO05D009606 2.6e-32 142.5 163 46.6
TAR628G0843 Trochodendron aralioides HOM05D007618 ORTHO05D009606 2.6e-32 142.5 170 45.9
DCAR_022841 Daucus carota HOM05D007618 ORTHO05D009606 3.4e-32 142.1 138 48.6
CsaV3_6G010180 Cucumis sativus L. HOM05D007618 ORTHO05D009606 4.5e-32 141.7 170 45.9
Eucgr.I01514 Eucalyptus grandis HOM05D007618 ORTHO05D009606 4.5e-32 141.7 170 45.9
Thecc.06G045200 Theobroma cacao HOM05D007618 ORTHO05D009606 4.5e-32 141.7 170 46.5
GSVIVG01023981001 Vitis vinifera HOM05D007618 ORTHO05D009606 4.5e-32 141.7 166 47.0
Gohir.D10G000400 Gossypium hirsutum HOM05D007618 ORTHO05D009606 5.9e-32 141.4 170 45.9
MD10G1139000 Malus domestica HOM05D007618 ORTHO05D009606 5.9e-32 141.4 170 45.9
Hund06167 Selenicereus undatus HOM05D007618 ORTHO05D009606 5.9e-32 141.4 170 46.5
CDE05G0820 Ceratophyllum demersum HOM05D007618 ORTHO05D009606 7.7e-32 141.0 170 46.5
Cc09_g10690 Coffea canephora HOM05D007618 ORTHO05D009606 7.7e-32 141.0 170 45.3
Solyc01g112170.3 Solanum lycopersicum HOM05D007618 ORTHO05D009606 7.7e-32 141.0 170 45.3
Sopen01g054220 Solanum pennellii HOM05D007618 ORTHO05D009606 7.7e-32 141.0 170 45.3
MSTRG.19948 Avicennia marina HOM05D007618 ORTHO05D009606 1.0e-31 140.6 170 44.7
HPP92_022157 Vanilla planifolia HOM05D007618 ORTHO05D009606 1.0e-31 140.6 167 47.3
Prupe.8G177800 Prunus persica HOM05D007618 ORTHO05D009606 1.7e-31 139.8 170 45.9
MELO3C013504.2 Cucumis melo HOM05D007618 ORTHO05D009606 2.2e-31 139.4 170 45.9
Glyma.06G000700 Glycine max HOM05D007618 ORTHO05D009606 2.2e-31 139.4 164 47.0
Gorai.011G000800 Gossypium raimondii HOM05D002478 ORTHO05D003331 2.9e-31 139.0 163 46.6
Phvul.009G116000 Phaseolus vulgaris HOM05D007618 ORTHO05D009606 2.9e-31 139.0 170 45.3
SalBow1G1919 Salvia bowleyana HOM05D007618 ORTHO05D009606 2.9e-31 139.0 163 46.0
Lalb_Chr08g0246841 Lupinus albus HOM05D007618 ORTHO05D009606 3.8e-31 138.7 164 46.3
ClCG02G010360 Citrullus lanatus HOM05D007618 ORTHO05D009606 5.0e-31 138.3 163 46.6
PSO541G4833 Papaver somniferum HOM05D007618 ORTHO05D009606 5.0e-31 138.3 170 45.9
FAN15G3577 Fragaria x ananassa HOM05D007618 ORTHO05D009606 6.5e-31 137.9 163 46.0
FAN27G0591 Fragaria x ananassa HOM05D007618 ORTHO05D009606 8.5e-31 137.5 163 46.0
SGA_v2.0_scaffold32G13341 Striga asiatica HOM05D007618 ORTHO05D009606 8.5e-31 137.5 163 46.0
arahy.Tifrunner.gnm1.ann1.I7PWT1 Arachis hypogaea HOM05D007618 ORTHO05D009606 1.1e-30 137.1 157 47.8
COL.COLO4_26755 Corchorus olitorius HOM05D007618 ORTHO05D009606 1.1e-30 137.1 163 45.4
Nitab4.5_0000783g0170 Nicotiana tabacum HOM05D007618 ORTHO05D009606 1.1e-30 137.1 160 46.2
QL11p055874 Quercus lobata HOM05D007618 ORTHO05D009606 1.4e-30 136.7 163 44.8
Hma1.2p1_0271F.1_g108950 Hydrangea macrophylla HOM05D007618 ORTHO05D009606 2.5e-30 136.0 163 45.4
MBI08_g32524_MAGBIO Magnolia biondii HOM05D007618 ORTHO05D009606 2.5e-30 136.0 158 46.2
CiPaw.05G091300 Carya illinoinensis HOM05D007618 ORTHO05D009606 4.2e-30 135.2 170 44.7
AUR62011704 Chenopodium quinoa HOM05D007618 ORTHO05D009606 9.4e-30 134.0 169 44.4
Lj1g0004638 Lotus japonicus HOM05D007618 ORTHO05D009606 2.1e-29 132.9 170 44.7
EL10Ac9g21249 Beta vulgaris HOM05D007618 ORTHO05D009606 3.9e-28 128.6 161 44.1
PSO675G2292 Papaver somniferum HOM05D007618 ORTHO05D009606 3.9e-28 128.6 170 44.7
Duzib235G1428 Durio zibethinus HOM05D007618 ORTHO05D009606 5.1e-28 128.3 172 46.5
Gohir.A10G000200 Gossypium hirsutum HOM05D002478 ORTHO05D003331 5.1e-28 128.3 184 41.8
Lsat_1_v5_gn_8_120421 Lactuca sativa HOM05D007618 ORTHO05D009606 6.3e-26 121.3 168 41.7
arahy.Tifrunner.gnm1.ann1.ZSY7EJ Arachis hypogaea HOM05D007618 ORTHO05D009606 1.4e-25 120.2 158 44.9
Peaxi162Scf00362g00251 Petunia axillaris HOM05D007618 ORTHO05D009606 2.4e-25 119.4 152 44.7
Cfa005346 Carpinus fangiana HOM05D007618 ORTHO05D009606 5.3e-25 118.2 152 43.4
Nitab4.5_0011212g0030 Nicotiana tabacum HOM05D007618 ORTHO05D009606 2.0e-24 116.3 152 44.1
Sc18g0005980 Simmondsia chinensis HOM05D007618 ORTHO05D009606 3.2e-22 109.0 152 42.1
ECA233G1377 Erigeron canadensis HOM05D007618 ORTHO05D009606 1.0e-20 104.0 95 55.8
CBR_g37948 Chara braunii HOM05D007618 ORTHO05D009606 1.4e-20 103.6 164 35.4
vmacro02327 Vaccinium macrocarpon HOM05D007618 ORTHO05D009606 8.8e-20 100.9 218 32.6
Zm00001eb002550 Zea mays HOM05D007618 ORTHO05D009606 8.8e-20 100.9 95 52.6
Rhsim11G0196900 Rhododendron simsii HOM05D007618 ORTHO05D009606 4.4e-19 98.6 87 58.6
CBR_g30676 Chara braunii HOM05D007618 ORTHO05D009606 7.4e-19 97.8 162 34.0
QL11p055571 Quercus lobata HOM05D007618 ORTHO05D009606 1.3e-18 97.1 95 50.5
Glyma.04G001200 Glycine max HOM05D007618 ORTHO05D009606 1.7e-18 96.7 118 45.8
TPR.G29338 Trifolium pratense HOM05D007618 ORTHO05D009606 2.2e-18 96.3 81 61.7
Cre03.g200050 Chlamydomonas reinhardtii HOM05D007618 ORTHO05D009606 1.1e-17 94.0 162 36.4
arahy.Tifrunner.gnm1.ann1.U2J3P2 Arachis hypogaea HOM05D007618 ORTHO05D009606 2.4e-17 92.8 89 52.8
VMungo1309G2136 Vigna mungo HOM05D007618 ORTHO05D009606 3.1e-17 92.4 87 55.2
arahy.Tifrunner.gnm1.ann1.DQ7S7B Arachis hypogaea HOM05D007618 ORTHO05D009606 4.1e-17 92.0 116 46.6
Cre03.g200000 Chlamydomonas reinhardtii HOM05D007618 ORTHO05D009606 4.1e-17 92.0 165 32.7
Actinidia20565 Actinidia chinensis HOM05D007618 ORTHO05D009606 2.6e-16 89.4 95 48.4
PGSC0003DMG401014675 Solanum tuberosum HOM05D007618 ORTHO05D009606 8.5e-15 84.3 96 47.9
Cre12.g506850 Chlamydomonas reinhardtii HOM05D007618 ORTHO05D009606 1.1e-14 84.0 166 33.1
MCO11G779 Micromonas commoda HOM05D007618 ORTHO05D009606 7.2e-14 81.3 162 33.3
Psat5g000680 Pisum sativum HOM05D007618 ORTHO05D009606 4.4e-11 72.0 99 43.4
Atru.chr5.3316 Acer truncatum HOM05D000282 ORTHO05D000272 2.2e-10 69.7 67 50.7
CDE05G1760 Ceratophyllum demersum HOM05D007618 ORTHO05D009606 6.3e-10 68.2 62 51.6
Atru.chr8.2195 Acer truncatum HOM05D000282 ORTHO05D009606 1.4e-09 67.0 61 54.1
TPR.G38509 Trifolium pratense HOM05D007618 ORTHO05D009606 1.4e-09 67.0 39 71.8
Actinidia18005 Actinidia chinensis HOM05D007618 ORTHO05D009606 3.1e-09 65.9 62 48.4
Psat5g000560 Pisum sativum HOM05D007618 ORTHO05D009606 2.0e-08 63.2 39 69.2
FAN24G0716 Fragaria x ananassa HOM05D007618 ORTHO05D009606 1.0e-07 60.8 32 75.0
Oeu006123.1 Olea europaea HOM05D007618 ORTHO05D009606 1.0e-07 60.8 38 60.5
ECA233G4785 Erigeron canadensis HOM05D007618 ORTHO05D009606 3.8e-07 58.9 75 37.3
Pp3c12_21880 Physcomitrium patens HOM05D000059 ORTHO05D000128 4.2e-06 55.5 143 27.3
arahy.Tifrunner.gnm1.ann1.0TM8HZ Arachis hypogaea HOM05D007618 ORTHO05D009606 9.4e-06 54.3 47 57.4


User provided reference genes

Program Settings