Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO367G1046 Selaginella moellendorffii HOM05D006216 ORTHO05D007760 5.2e-201 704.1 348 100.0
ATR0782G058 Amborella trichopoda HOM05D006216 ORTHO05D007760 1.7e-135 486.5 323 72.4
Pp3c26_490 Physcomitrium patens HOM05D006216 ORTHO05D007760 6.5e-135 484.6 325 71.4
Mapoly0033s0031 Marchantia polymorpha HOM05D006216 ORTHO05D007760 1.2e-133 480.3 322 70.8
Glyma.20G046800 Glycine max HOM05D006216 ORTHO05D007760 5.7e-131 471.5 327 70.3
TAR633G2593 Trochodendron aralioides HOM05D006216 ORTHO05D007760 1.7e-130 469.9 335 67.5
VMungo1215G0750 Vigna mungo HOM05D006216 ORTHO05D007760 2.8e-130 469.2 329 69.3
Phvul.006G019500 Phaseolus vulgaris HOM05D006216 ORTHO05D007760 4.8e-130 468.4 336 68.2
PGSC0003DMG400022703 Solanum tuberosum HOM05D006216 ORTHO05D007760 6.3e-130 468.0 335 67.5
Ciclev10015579m.g Citrus clementina HOM05D006216 ORTHO05D007760 8.2e-130 467.6 323 70.0
Sc04g0009550 Simmondsia chinensis HOM05D006216 ORTHO05D007760 8.2e-130 467.6 323 68.4
Glyma.13G072700 Glycine max HOM05D006216 ORTHO05D007760 1.4e-129 466.8 327 69.7
PGR119G0354 Punica granatum HOM05D006216 ORTHO05D007760 1.4e-129 466.8 337 66.5
AUR62024257 Chenopodium quinoa HOM05D006216 ORTHO05D007760 1.8e-129 466.5 323 68.7
Solyc01g009010.3 Solanum lycopersicum HOM05D006216 ORTHO05D007760 2.4e-129 466.1 335 67.2
GSVIVG01037382001 Vitis vinifera HOM05D006216 ORTHO05D007760 5.3e-129 464.9 323 70.0
arahy.Tifrunner.gnm1.ann1.CPM77E Arachis hypogaea HOM05D006216 ORTHO05D007760 7.0e-129 464.5 327 69.4
Dinv29341 Davidia involucrata HOM05D006216 ORTHO05D007760 7.0e-129 464.5 323 68.4
Hma1.2p1_1843F.1_g305010 Hydrangea macrophylla HOM05D006216 ORTHO05D007760 7.0e-129 464.5 323 69.0
Nitab4.5_0002300g0020 Nicotiana tabacum HOM05D006216 ORTHO05D007760 7.0e-129 464.5 323 68.1
Sopen01g004500 Solanum pennellii HOM05D006216 ORTHO05D007760 7.0e-129 464.5 335 66.9
CSS0031944 Camellia sinensis var. sinensis HOM05D006216 ORTHO05D007760 2.0e-128 463.0 323 67.8
AUR62005484 Chenopodium quinoa HOM05D006216 ORTHO05D007760 2.0e-128 463.0 322 68.6
Thhalv10002004m.g Eutrema salsugineum HOM05D006216 ORTHO05D007760 2.0e-128 463.0 341 64.5
arahy.Tifrunner.gnm1.ann1.G3L2E7 Arachis hypogaea HOM05D006216 ORTHO05D007760 2.7e-128 462.6 327 69.1
Lj2A825T28 Lonicera japonica HOM05D006216 ORTHO05D007760 2.7e-128 462.6 327 67.9
Manes.02G134400 Manihot esculenta HOM05D006216 ORTHO05D007760 2.7e-128 462.6 323 69.0
CAN.G714.2 Capsicum annuum HOM05D006216 ORTHO05D007760 3.5e-128 462.2 323 68.4
RcHm_v2.0_Chr5g0050131 Rosa chinensis HOM05D006216 ORTHO05D007760 4.5e-128 461.8 324 67.3
Lsat_1_v5_gn_2_36221 Lactuca sativa HOM05D006216 ORTHO05D007760 5.9e-128 461.5 323 69.0
Nn7g37015 Nelumbo nucifera HOM05D006216 ORTHO05D007760 5.9e-128 461.5 305 71.8
Gohir.D07G123300 Gossypium hirsutum HOM05D006216 ORTHO05D007760 1.0e-127 460.7 323 69.0
MELO3C015605.2 Cucumis melo HOM05D006216 ORTHO05D007760 1.3e-127 460.3 323 70.3
CsaV3_1G041900 Cucumis sativus L. HOM05D006216 ORTHO05D007760 1.3e-127 460.3 323 70.0
ECA238G2733 Erigeron canadensis HOM05D006216 ORTHO05D007760 1.3e-127 460.3 323 69.3
Lj6g0023824 Lotus japonicus HOM05D006216 ORTHO05D007760 1.3e-127 460.3 327 67.6
Lalb_Chr18g0048331 Lupinus albus HOM05D006216 ORTHO05D007760 1.3e-127 460.3 330 68.2
Gohir.A07G119000 Gossypium hirsutum HOM05D006216 ORTHO05D007760 2.2e-127 459.5 323 68.7
HanXRQChr14g0433421 Helianthus annuus HOM05D006216 ORTHO05D007760 2.2e-127 459.5 323 69.0
Thecc.09G251000 Theobroma cacao HOM05D006216 ORTHO05D007760 2.2e-127 459.5 320 69.4
Manes.01G176400 Manihot esculenta HOM05D006216 ORTHO05D007760 3.8e-127 458.8 323 68.4
Os01g0802100 Oryza sativa ssp. japonica HOM05D006216 ORTHO05D007760 3.8e-127 458.8 334 65.3
CANSAT54G1188 Cannabis sativa HOM05D006216 ORTHO05D007760 5.0e-127 458.4 323 69.7
Potri.009G021800 Populus trichocarpa HOM05D006216 ORTHO05D007760 5.0e-127 458.4 321 68.8
SalBow6G4438 Salvia bowleyana HOM05D006216 ORTHO05D007760 5.0e-127 458.4 330 66.7
THA.LOC104816956 Tarenaya hassleriana HOM05D006216 ORTHO05D007760 5.0e-127 458.4 338 66.3
QL01p020730 Quercus lobata HOM05D006216 ORTHO05D007760 6.5e-127 458.0 323 67.8
Sed0006982 Sechium edule HOM05D006216 ORTHO05D007760 8.5e-127 457.6 323 69.3
Zm00001eb150630 Zea mays HOM05D006216 ORTHO05D007760 8.5e-127 457.6 333 65.8
Migut.D00703 Erythranthe guttata HOM05D006216 ORTHO05D007760 1.1e-126 457.2 326 66.9
A07p17910 Brassica napus HOM05D006216 ORTHO05D007760 1.5e-126 456.8 341 63.6
BraA07t29509Z Brassica rapa HOM05D006216 ORTHO05D007760 1.5e-126 456.8 341 63.6
TWI31G0496 Tripterygium wilfordii HOM05D006216 ORTHO05D007760 1.5e-126 456.8 323 68.1
Ca_13675_v3 Cicer arietinum L. HOM05D006216 ORTHO05D007760 1.9e-126 456.4 325 67.7
vmacro04357 Vaccinium macrocarpon HOM05D006216 ORTHO05D007760 3.2e-126 455.7 332 67.2
Gorai.001G133000 Gossypium raimondii HOM05D006216 ORTHO05D007760 4.2e-126 455.3 326 68.4
PSO339G5720 Papaver somniferum HOM05D006216 ORTHO05D007760 4.2e-126 455.3 335 64.5
BcaC02g10847 Brassica carinata HOM05D006216 ORTHO05D007760 5.5e-126 454.9 341 63.3
C04p24560 Brassica napus HOM05D006216 ORTHO05D007760 5.5e-126 454.9 341 63.3
BolC4t23960H Brassica oleracea HOM05D006216 ORTHO05D007760 5.5e-126 454.9 341 63.0
Rhsim13G0202500 Rhododendron simsii HOM05D006216 ORTHO05D007760 5.5e-126 454.9 324 68.2
Potri.001G225100 Populus trichocarpa HOM05D006216 ORTHO05D007760 7.2e-126 454.5 323 67.8
Actinidia07007 Actinidia chinensis HOM05D006216 ORTHO05D007760 9.4e-126 454.1 323 67.2
Aqoxy1G00047 Aquilegia oxysepala HOM05D006216 ORTHO05D007760 9.4e-126 454.1 324 67.6
TPR.G11861 Trifolium pratense HOM05D006216 ORTHO05D007760 1.2e-125 453.8 327 67.0
Hund25392 Selenicereus undatus HOM05D006216 ORTHO05D007760 2.1e-125 453.0 323 66.6
BcaB02g10053 Brassica carinata HOM05D006216 ORTHO05D007760 2.7e-125 452.6 341 63.0
Eucgr.J00662 Eucalyptus grandis HOM05D006216 ORTHO05D007760 2.7e-125 452.6 323 66.9
PSO384G3582 Papaver somniferum HOM05D006216 ORTHO05D007760 2.7e-125 452.6 335 63.9
FvH4_3g27650 Fragaria vesca HOM05D006216 ORTHO05D007760 3.6e-125 452.2 336 64.6
FAN11G0826 Fragaria x ananassa HOM05D006216 ORTHO05D007760 3.6e-125 452.2 336 64.6
FAN21G1147 Fragaria x ananassa HOM05D006216 ORTHO05D007760 3.6e-125 452.2 336 64.6
CARHR119100 Cardamine hirsuta HOM05D006216 ORTHO05D007760 4.7e-125 451.8 323 66.3
Sp4g08430 Schrenkiella parvula HOM05D006216 ORTHO05D007760 6.1e-125 451.4 341 63.0
FAN25G0225 Fragaria x ananassa HOM05D006216 ORTHO05D007760 8.0e-125 451.1 336 64.6
MD03G1163100 Malus domestica HOM05D006216 ORTHO05D007760 8.0e-125 451.1 324 66.0
TWI75G0612 Tripterygium wilfordii HOM05D006216 ORTHO05D007760 8.0e-125 451.1 323 67.5
CiPaw.13G146100 Carya illinoinensis HOM05D006216 ORTHO05D007760 1.0e-124 450.7 323 66.6
AL4G20170 Arabidopsis lyrata HOM05D006216 ORTHO05D007760 1.4e-124 450.3 323 66.3
Carub.0004s0743 Capsella rubella HOM05D006216 ORTHO05D007760 1.4e-124 450.3 323 66.6
Medtr3g437340 Medicago truncatula HOM05D006216 ORTHO05D007760 1.4e-124 450.3 325 67.1
Cfa010159 Carpinus fangiana HOM05D006216 ORTHO05D007760 3.0e-124 449.1 336 63.4
Peaxi162Scf00050g02022 Petunia axillaris HOM05D006216 ORTHO05D007760 4.0e-124 448.7 330 66.1
AT2G26930 Arabidopsis thaliana HOM05D006216 ORTHO05D007760 5.2e-124 448.4 323 65.6
CSS0004136 Camellia sinensis var. sinensis HOM05D006216 ORTHO05D007760 5.2e-124 448.4 335 63.9
Cc01_g07140 Coffea canephora HOM05D006216 ORTHO05D007760 6.8e-124 448.0 322 66.5
Psat5g182280 Pisum sativum HOM05D006216 ORTHO05D007760 6.8e-124 448.0 327 65.7
MSTRG.12426 Avicennia marina HOM05D006216 ORTHO05D007760 2.0e-123 446.4 323 65.0
Duzib168G1114 Durio zibethinus HOM05D006216 ORTHO05D007760 2.0e-123 446.4 323 67.8
Haze_23545 Corylus avellana HOM05D006216 ORTHO05D007760 3.7e-122 442.2 323 65.0
SGA_v2.0_scaffold79G25547 Striga asiatica HOM05D006216 ORTHO05D007760 5.4e-121 438.3 353 60.9
Aa31LG5G8850 Aethionema arabicum HOM05D006216 ORTHO05D007760 1.6e-120 436.8 364 59.1
MSTRG.21323 Avicennia marina HOM05D006216 ORTHO05D007760 2.0e-120 436.4 322 64.6
Lalb_Chr15g0080191 Lupinus albus HOM05D006216 ORTHO05D007760 2.7e-120 436.0 327 64.8
CDE08G0663 Ceratophyllum demersum HOM05D006216 ORTHO05D007760 5.0e-119 431.8 303 67.3
Sabra16G0133700 Salix brachista HOM05D006216 ORTHO05D007760 2.5e-118 429.5 375 58.7
CBR_g22270 Chara braunii HOM05D006216 ORTHO05D007760 9.4e-118 427.6 318 64.8
Atru.BG.104.p Acer truncatum HOM05D006216 ORTHO05D007760 2.7e-117 426.0 301 69.4
ClCG03G014320 Citrullus lanatus HOM05D006216 ORTHO05D007760 2.7e-117 426.0 323 65.0
EL10Ac6g13846 Beta vulgaris HOM05D006216 ORTHO05D007760 3.6e-117 425.6 323 63.5
Migut.N02401 Erythranthe guttata HOM05D006216 ORTHO05D007760 1.8e-116 423.3 315 66.7
Nitab4.5_0000428g0050 Nicotiana tabacum HOM05D006216 ORTHO05D007760 2.6e-115 419.5 321 64.2
AagrBONN_evm.TU.Sc2ySwM_228.3849 Anthoceros agrestis HOM05D006216 ORTHO05D007760 9.8e-115 417.5 273 75.1
CDE09G0516 Ceratophyllum demersum HOM05D006216 ORTHO05D007760 2.2e-114 416.4 320 63.8
unitig_27.g25131 Utricularia gibba HOM05D006216 ORTHO05D007760 2.2e-114 416.4 295 68.1
HPP92_001661 Vanilla planifolia HOM05D006216 ORTHO05D007760 8.0e-109 397.9 356 57.9
Atru.chr3.2830 Acer truncatum HOM05D006216 ORTHO05D007760 3.0e-108 396.0 275 71.3
DCAR_006327 Daucus carota HOM05D006216 ORTHO05D007760 1.3e-106 390.6 322 61.5
Hma1.2p1_1843F.1_g305000 Hydrangea macrophylla HOM05D006216 ORTHO05D007760 1.7e-98 363.6 242 71.5
MBI19_g37419_MAGBIO Magnolia biondii HOM05D006216 ORTHO05D007760 3.2e-89 332.8 335 52.2
Prupe.4G269400 Prunus persica HOM05D006216 ORTHO05D007760 1.6e-85 320.5 211 70.6
MCO08G209 Micromonas commoda HOM05D006216 ORTHO05D007760 1.3e-82 310.8 291 54.0
Cre02.g145050 Chlamydomonas reinhardtii HOM05D006216 ORTHO05D007760 7.1e-81 305.1 294 54.4
PRCOL_00004294 Prasinoderma coloniale HOM05D006216 ORTHO05D007760 1.1e-78 297.7 311 49.8
Sabra09G0013700 Salix brachista HOM05D006216 ORTHO05D007760 5.4e-73 278.9 292 50.7
SEGI_15556 Sequoiadendron giganteum HOM05D006216 ORTHO05D007760 2.8e-69 266.5 177 72.9
Glyma.17G179800 Glycine max HOM05D006216 ORTHO05D007760 9.9e-59 231.5 170 68.8
SMO332G0042 Selaginella moellendorffii HOM05D006216 ORTHO05D007760 3.4e-43 179.9 99 88.9
SEGI_04634 Sequoiadendron giganteum HOM05D006216 ORTHO05D007760 1.3e-42 177.9 130 63.8
Hund17544 Selenicereus undatus HOM05D006216 ORTHO05D007760 6.5e-42 175.6 175 50.3
SMO332G0003 Selaginella moellendorffii HOM05D006216 ORTHO05D007760 5.5e-41 172.6 103 84.5
FAN26G0546 Fragaria x ananassa HOM05D006216 ORTHO05D010609 1.1e-30 138.3 109 62.4
SMO198G0007 Selaginella moellendorffii HOM05D006216 ORTHO05D007760 1.8e-23 114.4 131 51.1
Ca_29165_v3 Cicer arietinum L. HOM05D006216 ORTHO05D007760 5.9e-19 99.4 155 38.1
Hund00952 Selenicereus undatus HOM05D006216 ORTHO05D007760 3.3e-14 83.6 91 49.5
Oeu063625.1 Olea europaea HOM05D006216 ORTHO05D007760 7.0e-12 75.9 57 63.2
DCAR_006325 Daucus carota HOM05D006216 ORTHO05D007760 1.1e-09 68.6 55 52.7
SMO332G0035 Selaginella moellendorffii HOM05D014051 ORTHO05D016382 4.0e-07 60.1 34 76.5


User provided reference genes

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