Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO367G1028 Selaginella moellendorffii HOM05D029637 ORTHO05D376597 4.1e-181 637.9 310 100.0
SMO364G0696 Selaginella moellendorffii HOM05D029637 ORTHO05D375505 7.0e-64 248.4 247 47.0
SMO112G0065 Selaginella moellendorffii HOM05D029637 ORTHO05D375892 1.0e-59 234.6 226 49.1
SMO199G0082 Selaginella moellendorffii HOM05D029637 ORTHO05D375845 1.1e-19 101.7 117 55.6
SMO367G1130 Selaginella moellendorffii HOM05D002693 ORTHO05D008074 4.4e-18 96.3 54 90.7
PGSC0003DMG400015165 Solanum tuberosum HOM05D002693 ORTHO05D008074 7.6e-10 68.9 64 62.5
FAN04G2647 Fragaria x ananassa HOM05D002693 ORTHO05D008074 9.9e-10 68.6 64 62.5
Carub.0005s1458 Capsella rubella HOM05D002693 ORTHO05D008074 1.3e-09 68.2 60 63.3
FvH4_5g07070 Fragaria vesca HOM05D002693 ORTHO05D008074 1.3e-09 68.2 64 62.5
FAN08G3291 Fragaria x ananassa HOM05D002693 ORTHO05D008074 1.3e-09 68.2 64 62.5
FAN13G1374 Fragaria x ananassa HOM05D002693 ORTHO05D008074 1.3e-09 68.2 64 62.5
FAN18G1738 Fragaria x ananassa HOM05D002693 ORTHO05D008074 1.3e-09 68.2 64 62.5
RcHm_v2.0_Chr7g0191481 Rosa chinensis HOM05D002693 ORTHO05D008074 1.3e-09 68.2 64 60.9
AT3G48420 Arabidopsis thaliana HOM05D002693 ORTHO05D008074 1.7e-09 67.8 60 63.3
EL10Ac7g18055 Beta vulgaris HOM05D002693 ORTHO05D008074 1.7e-09 67.8 64 60.9
Lj5A101T102 Lonicera japonica HOM05D002693 ORTHO05D008074 1.7e-09 67.8 60 63.3
SEGI_18096 Sequoiadendron giganteum HOM05D002693 ORTHO05D008074 1.7e-09 67.8 60 61.7
HanXRQChr05g0156121 Helianthus annuus HOM05D002693 ORTHO05D008074 2.2e-09 67.4 60 63.3
Lsat_1_v5_gn_5_13101 Lactuca sativa HOM05D002693 ORTHO05D008074 2.2e-09 67.4 60 65.0
Solyc03g111610.3 Solanum lycopersicum HOM05D002693 ORTHO05D008074 2.2e-09 67.4 64 60.9
Sopen03g030730 Solanum pennellii HOM05D002693 ORTHO05D008074 2.2e-09 67.4 64 60.9
Cfa018903 Carpinus fangiana HOM05D002693 ORTHO05D008074 3.8e-09 66.6 64 59.4
Ca_16101_v3 Cicer arietinum L. HOM05D005390 ORTHO05D007086 3.8e-09 66.6 60 63.3
Ca_30077_v3 Cicer arietinum L. HOM05D005390 ORTHO05D007086 3.8e-09 66.6 60 63.3
Haze_07289 Corylus avellana HOM05D005390 ORTHO05D007086 3.8e-09 66.6 64 59.4
Nitab4.5_0002531g0130 Nicotiana tabacum HOM05D002693 ORTHO05D008074 3.8e-09 66.6 64 60.9
Peaxi162Scf00089g00838 Petunia axillaris HOM05D002693 ORTHO05D008074 3.8e-09 66.6 64 60.9
SalBow5G1929 Salvia bowleyana HOM05D002693 ORTHO05D008074 3.8e-09 66.6 60 63.3
BcaB01g00813 Brassica carinata HOM05D002693 ORTHO05D008074 4.9e-09 66.2 60 63.3
BcaB01g00815 Brassica carinata HOM05D002693 ORTHO05D008074 4.9e-09 66.2 60 63.3
A06p19280 Brassica napus HOM05D002693 ORTHO05D008074 4.9e-09 66.2 60 63.3
C08p23410 Brassica napus HOM05D002693 ORTHO05D008074 4.9e-09 66.2 60 63.3
BolC8t49969H Brassica oleracea HOM05D002693 ORTHO05D008074 4.9e-09 66.2 60 63.3
BraA06t25011Z Brassica rapa HOM05D002693 ORTHO05D008074 4.9e-09 66.2 60 63.3
ECA246G3621 Erigeron canadensis HOM05D002693 ORTHO05D008074 4.9e-09 66.2 60 63.3
MD14G1165800 Malus domestica HOM05D002693 ORTHO05D008074 4.9e-09 66.2 64 60.9
Medtr3g075230 Medicago truncatula HOM05D002693 ORTHO05D008074 4.9e-09 66.2 60 63.3
Sp5g13640 Schrenkiella parvula HOM05D002693 ORTHO05D008074 4.9e-09 66.2 60 63.3
BcaC01g02341 Brassica carinata HOM05D002693 ORTHO05D008074 6.4e-09 65.9 60 63.3
C03p66400 Brassica napus HOM05D002693 ORTHO05D008074 6.4e-09 65.9 60 63.3
BolC3t18913H Brassica oleracea HOM05D002693 ORTHO05D008074 6.4e-09 65.9 60 63.3
CANSAT80G0417 Cannabis sativa HOM05D002693 ORTHO05D008074 6.4e-09 65.9 64 60.9
Thhalv10010540m.g Eutrema salsugineum HOM05D002693 ORTHO05D008074 6.4e-09 65.9 60 63.3
Lj1g0007454 Lotus japonicus HOM05D002693 ORTHO05D008074 6.4e-09 65.9 60 61.7
Thecc.03G121000 Theobroma cacao HOM05D002693 ORTHO05D008074 6.4e-09 65.9 64 59.4
AUR62001263 Chenopodium quinoa HOM05D002693 ORTHO05D008074 8.4e-09 65.5 64 57.8
AUR62025747 Chenopodium quinoa HOM05D002693 ORTHO05D008074 8.4e-09 65.5 64 57.8
Glyma.04G191700 Glycine max HOM05D002693 ORTHO05D008074 8.4e-09 65.5 60 63.3
Glyma.06G174200 Glycine max HOM05D002693 ORTHO05D008074 8.4e-09 65.5 60 63.3
Gohir.A09G244700 Gossypium hirsutum HOM05D002693 ORTHO05D008074 8.4e-09 65.5 60 63.3
CAN.G472.45 Capsicum annuum HOM05D002693 ORTHO05D008074 1.1e-08 65.1 64 57.8
unitig_0.g1407 Utricularia gibba HOM05D002693 ORTHO05D008074 1.1e-08 65.1 64 59.4
Zm00001eb113090 Zea mays HOM05D002693 ORTHO05D008074 1.1e-08 65.1 60 61.7
Os03g0565200 Oryza sativa ssp. japonica HOM05D002693 ORTHO05D008074 1.4e-08 64.7 64 59.4
Psat5g139480 Pisum sativum HOM05D005390 ORTHO05D007086 1.4e-08 64.7 60 61.7
Prupe.5G159800 Prunus persica HOM05D002693 ORTHO05D008074 1.4e-08 64.7 64 60.9
TPR.G38598 Trifolium pratense HOM05D002693 ORTHO05D008074 1.4e-08 64.7 60 61.7
Prupe.5G159700 Prunus persica HOM05D002693 ORTHO05D008074 1.9e-08 64.3 64 59.4
CiPaw.11G013400 Carya illinoinensis HOM05D002693 ORTHO05D008074 2.4e-08 63.9 64 59.4
Duzib205G0413 Durio zibethinus HOM05D002693 ORTHO05D008074 2.4e-08 63.9 64 59.4
Lalb_Chr11g0069751 Lupinus albus HOM05D002693 ORTHO05D008074 2.4e-08 63.9 60 58.3
Nitab4.5_0001360g0120 Nicotiana tabacum HOM05D002693 ORTHO05D008074 2.4e-08 63.9 64 59.4
PGR044G0360 Punica granatum HOM05D002693 ORTHO05D008074 2.4e-08 63.9 60 60.0
Aa31LG4G16990 Aethionema arabicum HOM05D002693 ORTHO05D008074 3.2e-08 63.5 60 60.0
Cpa.g.sc4.47 Carica papaya HOM05D002693 ORTHO05D008074 3.2e-08 63.5 64 59.4
DCAR_016425 Daucus carota HOM05D002693 ORTHO05D008074 3.2e-08 63.5 64 59.4
MD06G1160600 Malus domestica HOM05D002693 ORTHO05D008074 3.2e-08 63.5 64 56.2
Phvul.009G169900 Phaseolus vulgaris HOM05D002693 ORTHO05D008074 3.2e-08 63.5 60 61.7
Potri.015G088500 Populus trichocarpa HOM05D002693 ORTHO05D008074 3.2e-08 63.5 64 59.4
Sabra15G0111400 Salix brachista HOM05D002693 ORTHO05D008074 3.2e-08 63.5 64 59.4
Hund18531 Selenicereus undatus HOM05D002693 ORTHO05D008074 3.2e-08 63.5 64 56.2
VMungo1309G0913 Vigna mungo HOM05D002693 ORTHO05D008074 3.2e-08 63.5 60 61.7
Aqoxy3G01325 Aquilegia oxysepala HOM05D002693 ORTHO05D008074 4.2e-08 63.2 60 61.7
Nn4g22488 Nelumbo nucifera HOM05D002693 ORTHO05D008074 4.2e-08 63.2 60 61.7
GSVIVG01007572001 Vitis vinifera HOM05D002693 ORTHO05D008074 4.2e-08 63.2 60 61.7
CBR_g22462 Chara braunii HOM05D002693 ORTHO05D008074 5.4e-08 62.8 47 68.1
Migut.O00226 Erythranthe guttata HOM05D002693 ORTHO05D008074 5.4e-08 62.8 60 58.3
Oeu053509.1 Olea europaea HOM05D002693 ORTHO05D008074 5.4e-08 62.8 60 60.0
Sed0019566 Sechium edule HOM05D002693 ORTHO05D008074 5.4e-08 62.8 64 56.2
HPP92_010508 Vanilla planifolia HOM05D002693 ORTHO05D008074 5.4e-08 62.8 64 56.2
Atru.chr9.1052 Acer truncatum HOM05D002693 ORTHO05D008074 7.1e-08 62.4 60 61.7
arahy.Tifrunner.gnm1.ann1.3ZI7DD Arachis hypogaea HOM05D002693 ORTHO05D008074 7.1e-08 62.4 60 58.3
arahy.Tifrunner.gnm1.ann1.V8X883 Arachis hypogaea HOM05D005390 ORTHO05D007086 7.1e-08 62.4 60 58.3
Ciclev10020897m.g Citrus clementina HOM05D002693 ORTHO05D008074 7.1e-08 62.4 64 57.8
Eucgr.K02765 Eucalyptus grandis HOM05D002693 ORTHO05D008074 7.1e-08 62.4 64 57.8
Manes.06G113900 Manihot esculenta HOM05D002693 ORTHO05D008074 7.1e-08 62.4 64 57.8
Actinidia36776 Actinidia chinensis HOM05D002693 ORTHO05D008074 9.3e-08 62.0 60 60.0
A06p27660 Brassica napus HOM05D002693 ORTHO05D008074 9.3e-08 62.0 60 60.0
CSS0044980 Camellia sinensis var. sinensis HOM05D002693 ORTHO05D008074 9.3e-08 62.0 60 60.0
MELO3C026235.2 Cucumis melo HOM05D002693 ORTHO05D008074 9.3e-08 62.0 64 57.8
CsaV3_1G000830 Cucumis sativus L. HOM05D002693 ORTHO05D008074 9.3e-08 62.0 64 57.8
Rhsim12G0171100 Rhododendron simsii HOM05D002693 ORTHO05D008074 9.3e-08 62.0 60 60.0
THA.LOC104821498 Tarenaya hassleriana HOM05D002693 ORTHO05D008074 9.3e-08 62.0 64 57.8
ATR0824G037 Amborella trichopoda HOM05D002693 ORTHO05D008074 1.2e-07 61.6 60 61.7
Cc04_g10650 Coffea canephora HOM05D002693 ORTHO05D008074 1.2e-07 61.6 64 59.4
Dinv38484 Davidia involucrata HOM05D002693 ORTHO05D008074 1.2e-07 61.6 60 60.0
MSTRG.11525 Avicennia marina HOM05D002693 ORTHO05D008074 1.6e-07 61.2 60 60.0
CDE06G2530 Ceratophyllum demersum HOM05D002693 ORTHO05D008074 1.6e-07 61.2 60 60.0
QL10p005573 Quercus lobata HOM05D002693 ORTHO05D008074 1.6e-07 61.2 64 56.2
AagrBONN_evm.TU.Sc2ySwM_362.2434 Anthoceros agrestis HOM05D002693 ORTHO05D008074 2.1e-07 60.8 60 58.3
Cre03.g206550 Chlamydomonas reinhardtii HOM05D002693 ORTHO05D008074 2.1e-07 60.8 44 72.7
ClCG06G017610 Citrullus lanatus HOM05D002693 ORTHO05D008074 2.7e-07 60.5 60 58.3
MBI08_g18358_MAGBIO Magnolia biondii HOM05D002693 ORTHO05D008074 3.5e-07 60.1 65 56.9
SGA_v2.0_scaffold90G27784 Striga asiatica HOM05D002693 ORTHO05D008074 3.5e-07 60.1 51 64.7
Mapoly0082s0060 Marchantia polymorpha HOM05D002693 ORTHO05D008074 6.0e-07 59.3 47 70.2
TAR622G1430 Trochodendron aralioides HOM05D002693 ORTHO05D008074 6.0e-07 59.3 60 60.0
Pp3c10_2693 Physcomitrium patens HOM05D002693 ORTHO05D008074 6.7e-06 55.8 47 63.8
PRCOL_00005469 Prasinoderma coloniale HOM05D002693 ORTHO05D008074 8.7e-06 55.5 44 63.6


User provided reference genes

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