Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO367G1013 Selaginella moellendorffii HOM05D002373 ORTHO05D008661 2.0e-130 469.2 246 100.0
Pp3c20_21790 Physcomitrium patens HOM05D002373 ORTHO05D008661 1.3e-73 280.4 246 58.5
Cpa.g.sc80.70 Carica papaya HOM05D002373 ORTHO05D008661 1.6e-71 273.5 243 57.2
TAR624G1149 Trochodendron aralioides HOM05D002373 ORTHO05D008661 6.1e-71 271.6 243 57.2
CDE02G2303 Ceratophyllum demersum HOM05D002373 ORTHO05D008661 4.0e-70 268.9 239 55.6
AUR62019433 Chenopodium quinoa HOM05D002373 ORTHO05D008661 4.0e-70 268.9 245 54.7
AUR62039201 Chenopodium quinoa HOM05D002373 ORTHO05D008661 4.0e-70 268.9 245 54.7
Migut.H01944 Erythranthe guttata HOM05D002373 ORTHO05D008661 4.0e-70 268.9 241 56.4
A05p18620 Brassica napus HOM05D002373 ORTHO05D008661 8.8e-70 267.7 243 55.1
BraA05t20753Z Brassica rapa HOM05D002373 ORTHO05D008661 8.8e-70 267.7 243 55.1
CSS0006904 Camellia sinensis var. sinensis HOM05D002373 ORTHO05D008661 8.8e-70 267.7 243 56.8
Ciclev10008924m.g Citrus clementina HOM05D002373 ORTHO05D008661 1.2e-69 267.3 243 56.4
CsaV3_3G019460 Cucumis sativus L. HOM05D002373 ORTHO05D008661 1.2e-69 267.3 243 53.9
THA.LOC104810464 Tarenaya hassleriana HOM05D002373 ORTHO05D008661 1.2e-69 267.3 243 55.1
MELO3C019408.2 Cucumis melo HOM05D002373 ORTHO05D008661 1.5e-69 266.9 243 53.9
BcaC08g44045 Brassica carinata HOM05D002373 ORTHO05D008661 2.0e-69 266.5 243 54.7
BolC6t36626H Brassica oleracea HOM05D002373 ORTHO05D008661 2.0e-69 266.5 243 54.7
arahy.Tifrunner.gnm1.ann1.CVL1T8 Arachis hypogaea HOM05D002373 ORTHO05D008661 3.4e-69 265.8 243 56.8
CANSAT56G3654 Cannabis sativa HOM05D002373 ORTHO05D008661 3.4e-69 265.8 243 55.6
EL10Ac4g08187 Beta vulgaris HOM05D002373 ORTHO05D008661 4.4e-69 265.4 243 55.6
DCAR_019560 Daucus carota HOM05D002373 ORTHO05D008661 4.4e-69 265.4 243 56.0
Aa31LG10G2010 Aethionema arabicum HOM05D002373 ORTHO05D008661 5.7e-69 265.0 243 56.4
arahy.Tifrunner.gnm1.ann1.D1WMTZ Arachis hypogaea HOM05D002373 ORTHO05D008661 5.7e-69 265.0 243 56.8
Lj3g0019501 Lotus japonicus HOM05D002373 ORTHO05D008661 5.7e-69 265.0 243 55.6
Potri.011G119800 Populus trichocarpa HOM05D002373 ORTHO05D008661 5.7e-69 265.0 243 57.6
Sopen12g007190 Solanum pennellii HOM05D002373 ORTHO05D008661 5.7e-69 265.0 243 56.4
AagrBONN_evm.TU.Sc2ySwM_344.3401 Anthoceros agrestis HOM05D002373 ORTHO05D008661 7.5e-69 264.6 245 56.3
COL.COLO4_27178 Corchorus olitorius HOM05D002373 ORTHO05D008661 7.5e-69 264.6 243 55.6
Lalb_Chr25g0286331 Lupinus albus HOM05D002373 ORTHO05D008661 7.5e-69 264.6 243 56.4
Sed0026190 Sechium edule HOM05D002373 ORTHO05D008661 7.5e-69 264.6 241 53.5
GSVIVG01014327001 Vitis vinifera HOM05D002373 ORTHO05D008661 7.5e-69 264.6 241 55.6
Atru.BG.257.p Acer truncatum HOM05D002373 ORTHO05D008661 9.8e-69 264.2 243 55.1
Thecc.07G090300 Theobroma cacao HOM05D002373 ORTHO05D008661 9.8e-69 264.2 243 55.1
Gohir.A13G146100 Gossypium hirsutum HOM05D002373 ORTHO05D008661 1.3e-68 263.8 243 55.1
HanXRQChr12g0364201 Helianthus annuus HOM05D002373 ORTHO05D008661 1.3e-68 263.8 241 56.8
C06p14460 Brassica napus HOM05D002373 ORTHO05D008661 1.7e-68 263.5 243 54.3
CAN.G213.9 Capsicum annuum HOM05D002373 ORTHO05D008661 1.7e-68 263.5 243 56.0
CARHR043340 Cardamine hirsuta HOM05D002373 ORTHO05D008661 1.7e-68 263.5 243 55.1
Sp1g39670 Schrenkiella parvula HOM05D002373 ORTHO05D008661 1.7e-68 263.5 243 54.7
Actinidia35249 Actinidia chinensis HOM05D002373 ORTHO05D008661 2.2e-68 263.1 243 56.4
Dinv20179 Davidia involucrata HOM05D002373 ORTHO05D008661 2.2e-68 263.1 242 55.8
MBI06_g23077_MAGBIO Magnolia biondii HOM05D002373 ORTHO05D008661 2.2e-68 263.1 243 55.6
Solyc12g013870.3 Solanum lycopersicum HOM05D002373 ORTHO05D008661 2.2e-68 263.1 243 56.0
Glyma.12G224900 Glycine max HOM05D002373 ORTHO05D008661 2.8e-68 262.7 243 55.1
Atru.BG.152.p Acer truncatum HOM05D002373 ORTHO05D008661 3.7e-68 262.3 243 54.7
ECA240G3063 Erigeron canadensis HOM05D002373 ORTHO05D008661 3.7e-68 262.3 241 56.0
PGSC0003DMG400015321 Solanum tuberosum HOM05D002373 ORTHO05D008661 3.7e-68 262.3 243 56.0
Cfa020577 Carpinus fangiana HOM05D002373 ORTHO05D008661 4.9e-68 261.9 243 54.3
Gohir.D13G151000 Gossypium hirsutum HOM05D002373 ORTHO05D008661 4.9e-68 261.9 243 54.7
Manes.03G109500 Manihot esculenta HOM05D002373 ORTHO05D008661 4.9e-68 261.9 243 56.0
Eucgr.F01146 Eucalyptus grandis HOM05D002373 ORTHO05D008661 6.3e-68 261.5 243 55.6
Thhalv10011660m.g Eutrema salsugineum HOM05D002373 ORTHO05D008661 6.3e-68 261.5 241 54.4
BcaB02g10929 Brassica carinata HOM05D002373 ORTHO05D005805 1.4e-67 260.4 243 54.7
Zm00001eb153060 Zea mays HOM05D002373 ORTHO05D008661 1.4e-67 260.4 243 54.3
Phvul.002G286700 Phaseolus vulgaris HOM05D002373 ORTHO05D008661 2.4e-67 259.6 243 55.1
PGR083G2563 Punica granatum HOM05D002373 ORTHO05D008661 2.4e-67 259.6 243 55.6
SGA_v2.0_scaffold70G23676 Striga asiatica HOM05D002373 ORTHO05D008661 2.4e-67 259.6 262 51.1
AT1G53120 Arabidopsis thaliana HOM05D002373 ORTHO05D008661 3.1e-67 259.2 243 53.9
Nn1g04122 Nelumbo nucifera HOM05D002373 ORTHO05D008661 4.1e-67 258.8 243 53.9
AL1G61480 Arabidopsis lyrata HOM05D002373 ORTHO05D008661 5.4e-67 258.5 243 53.9
FAN16G2188 Fragaria x ananassa HOM05D002373 ORTHO05D008661 5.4e-67 258.5 244 53.3
Ah.06g184370 Amaranthus hybridus HOM05D002373 ORTHO05D008661 7.0e-67 258.1 243 54.3
VMungo1080G1315 Vigna mungo HOM05D002373 ORTHO05D008661 7.0e-67 258.1 243 54.3
CSS0005109 Camellia sinensis var. sinensis HOM05D002373 ORTHO05D008661 9.2e-67 257.7 243 55.1
Medtr2g085340 Medicago truncatula HOM05D002373 ORTHO05D008661 9.2e-67 257.7 243 54.3
Psat5g243920 Pisum sativum HOM05D002373 ORTHO05D008661 9.2e-67 257.7 243 54.7
Ca_03504_v3 Cicer arietinum L. HOM05D002373 ORTHO05D008661 2.0e-66 256.5 243 53.9
MD11G1252400 Malus domestica HOM05D002373 ORTHO05D008661 2.0e-66 256.5 243 54.3
Sabra11G0104200 Salix brachista HOM05D002373 ORTHO05D008661 2.0e-66 256.5 245 54.3
Carub.0001s4228 Capsella rubella HOM05D002373 ORTHO05D008661 2.7e-66 256.1 243 53.9
QL08p022081 Quercus lobata HOM05D002373 ORTHO05D008661 2.7e-66 256.1 243 52.7
TPR.G39017 Trifolium pratense HOM05D002373 ORTHO05D008661 2.7e-66 256.1 243 53.9
ClCG05G009320 Citrullus lanatus HOM05D002373 ORTHO05D008661 3.5e-66 255.8 255 50.2
Os01g0747700 Oryza sativa ssp. japonica HOM05D002373 ORTHO05D008661 3.5e-66 255.8 243 53.1
CiPaw.11G170200 Carya illinoinensis HOM05D002373 ORTHO05D008661 4.5e-66 255.4 264 50.4
Lsat_1_v5_gn_9_97941 Lactuca sativa HOM05D002373 ORTHO05D008661 4.5e-66 255.4 241 55.2
HPP92_024439 Vanilla planifolia HOM05D002373 ORTHO05D008661 4.5e-66 255.4 243 53.9
FAN11G3740 Fragaria x ananassa HOM05D002373 ORTHO05D008661 5.9e-66 255.0 243 52.7
MSTRG.12905 Avicennia marina HOM05D002373 ORTHO05D008661 7.7e-66 254.6 241 54.4
RcHm_v2.0_Chr5g0033281 Rosa chinensis HOM05D002373 ORTHO05D008661 1.7e-65 253.4 243 51.4
FvH4_3g19840 Fragaria vesca HOM05D002373 ORTHO05D008661 3.8e-65 252.3 243 51.9
Prupe.4G180500 Prunus persica HOM05D002373 ORTHO05D008661 3.8e-65 252.3 243 53.1
Phvul.005G072600 Phaseolus vulgaris HOM05D002373 ORTHO05D008661 5.0e-65 251.9 243 54.3
Hund20000 Selenicereus undatus HOM05D002373 ORTHO05D008661 6.6e-65 251.5 243 54.3
unitig_26.g9527 Utricularia gibba HOM05D002373 ORTHO05D008661 1.5e-64 250.4 239 56.5
FAN25G2634 Fragaria x ananassa HOM05D002373 ORTHO05D008661 1.9e-64 250.0 243 51.9
vmacro09529 Vaccinium macrocarpon HOM05D002373 ORTHO05D008661 1.2e-63 247.3 246 52.8
Mapoly0051s0038 Marchantia polymorpha HOM05D002373 ORTHO05D008661 3.0e-62 242.7 244 52.5
Lj1C842T3 Lonicera japonica HOM05D002373 ORTHO05D008661 9.8e-61 237.7 243 53.1
Nitab4.5_0009292g0020 Nicotiana tabacum HOM05D002373 ORTHO05D008661 9.8e-61 237.7 224 55.8
Aqoxy1G02390 Aquilegia oxysepala HOM05D002373 ORTHO05D008661 1.3e-60 237.3 243 52.3
Peaxi162Scf00000g03511 Petunia axillaris HOM05D002373 ORTHO05D008661 8.3e-60 234.6 225 54.7
ATR0737G132 Amborella trichopoda HOM05D002373 ORTHO05D008661 1.8e-59 233.4 222 55.0
Cre12.g502950 Chlamydomonas reinhardtii HOM05D002373 ORTHO05D008661 2.7e-58 229.6 243 51.4
Sc03g0010080 Simmondsia chinensis HOM05D002373 ORTHO05D008661 1.0e-57 227.6 224 53.1
Gorai.013G170800 Gossypium raimondii HOM05D002373 ORTHO05D008661 1.7e-57 226.9 216 53.2
FAN21G4050 Fragaria x ananassa HOM05D002373 ORTHO05D008661 3.3e-56 222.6 219 51.1
Oeu060559.2 Olea europaea HOM05D002373 ORTHO05D008661 3.1e-54 216.1 316 42.7
Nitab4.5_0000332g0080 Nicotiana tabacum HOM05D002373 ORTHO05D008661 8.3e-52 208.0 224 51.8
Haze_09434 Corylus avellana HOM05D002373 ORTHO05D008661 1.0e-49 201.1 243 44.4
Rhsim04G0021500 Rhododendron simsii HOM05D002373 ORTHO05D008661 3.9e-49 199.1 243 46.5
TWI38G1988 Tripterygium wilfordii HOM05D002373 ORTHO05D008661 8.1e-47 191.4 190 54.7
PSO541G6350 Papaver somniferum HOM05D002373 ORTHO05D008661 4.0e-46 189.1 190 53.7
MCO14G219 Micromonas commoda HOM05D002373 ORTHO05D008661 1.7e-44 183.7 249 41.8
CDE08G0691 Ceratophyllum demersum HOM05D002373 ORTHO05D008661 8.6e-41 171.4 150 54.7
Gorai.013G169000 Gossypium raimondii HOM05D002373 ORTHO05D008661 8.9e-30 134.8 137 49.6
Glyma.13G276400 Glycine max HOM05D002373 ORTHO05D008661 4.2e-27 125.9 169 40.8
CSS0025404 Camellia sinensis var. sinensis HOM05D002373 ORTHO05D008661 4.6e-26 122.5 133 50.4
Gohir.D13G152082 Gossypium hirsutum HOM05D002373 ORTHO05D008661 1.1e-24 117.9 86 65.1
Gorai.013G170900 Gossypium raimondii HOM05D002373 ORTHO05D008661 3.3e-24 116.3 86 65.1
Thecc.07G090900 Theobroma cacao HOM05D002373 ORTHO05D008661 2.4e-22 110.2 110 51.8
Gohir.A13G147066 Gossypium hirsutum HOM05D002373 ORTHO05D008661 9.0e-22 108.2 81 64.2
PRCOL_00005720 Prasinoderma coloniale HOM05D002373 ORTHO05D008661 9.3e-19 98.2 269 32.0
A01p26780 Brassica napus HOM05D002373 ORTHO05D008661 1.3e-15 87.8 70 58.6
CSS0007182 Camellia sinensis var. sinensis HOM05D002373 ORTHO05D008661 1.8e-09 67.4 69 47.8
CSS0007754 Camellia sinensis var. sinensis HOM05D002373 ORTHO05D008661 2.5e-08 63.5 62 51.6


User provided reference genes

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