Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO367G0911 Selaginella moellendorffii HOM05D000595 ORTHO05D008454 4.9e-243 844.0 407 100.0
Dinv29591 Davidia involucrata HOM05D000595 ORTHO05D008454 3.0e-115 419.5 403 49.6
Pp3c9_4240 Physcomitrium patens HOM05D000595 ORTHO05D008454 3.0e-115 419.5 402 50.2
TAR636G3484 Trochodendron aralioides HOM05D000595 ORTHO05D008454 3.9e-115 419.1 403 49.1
Atru.chr4.1710 Acer truncatum HOM05D000595 ORTHO05D008454 5.1e-115 418.7 403 49.9
PSO017G5401 Papaver somniferum HOM05D000595 ORTHO05D008454 2.0e-114 416.8 403 48.6
PSO063G0672 Papaver somniferum HOM05D000595 ORTHO05D008454 2.0e-114 416.8 403 48.6
HanXRQChr07g0185731 Helianthus annuus HOM05D000595 ORTHO05D008454 2.5e-114 416.4 406 49.8
Cc03_g07770 Coffea canephora HOM05D000595 ORTHO05D008454 4.3e-114 415.6 403 47.4
Nn1g07860 Nelumbo nucifera HOM05D000595 ORTHO05D008454 1.3e-113 414.1 403 48.1
CSS0010328 Camellia sinensis var. sinensis HOM05D000595 ORTHO05D008454 1.7e-113 413.7 403 48.1
Peaxi162Scf00652g00421 Petunia axillaris HOM05D000595 ORTHO05D008454 3.7e-113 412.5 407 48.4
Glyma.15G133500 Glycine max HOM05D000595 ORTHO05D008454 1.4e-112 410.6 403 48.6
Lj6C558G7 Lonicera japonica HOM05D000595 ORTHO05D008454 1.4e-112 410.6 414 48.3
CAN.G767.41 Capsicum annuum HOM05D000595 ORTHO05D008454 2.4e-112 409.8 406 49.8
ATR1145G018 Amborella trichopoda HOM05D000595 ORTHO05D008454 3.1e-112 409.5 403 46.9
MD04G1008200 Malus domestica HOM05D000595 ORTHO05D008454 3.1e-112 409.5 405 48.6
Sopen12g033140 Solanum pennellii HOM05D000595 ORTHO05D008454 5.3e-112 408.7 406 49.3
Lj6g0010121 Lotus japonicus HOM05D000595 ORTHO05D008454 9.1e-112 407.9 403 48.4
Solyc12g098360.2 Solanum lycopersicum HOM05D000595 ORTHO05D008454 9.1e-112 407.9 406 49.5
Aqoxy2G03878 Aquilegia oxysepala HOM05D000595 ORTHO05D008454 1.2e-111 407.5 403 47.4
Eucgr.H02785 Eucalyptus grandis HOM05D000595 ORTHO05D008454 1.2e-111 407.5 404 47.8
Prupe.1G006900 Prunus persica HOM05D000595 ORTHO05D008454 1.2e-111 407.5 405 47.9
VMungo0540G0041 Vigna mungo HOM05D000595 ORTHO05D001274 1.2e-111 407.5 403 47.6
Psat1g165160 Pisum sativum HOM05D000595 ORTHO05D008454 1.5e-111 407.1 405 49.1
TPR.G22264 Trifolium pratense HOM05D000595 ORTHO05D008454 2.0e-111 406.8 403 47.4
Carub.0001s0414 Capsella rubella HOM05D000595 ORTHO05D008454 2.6e-111 406.4 404 49.5
arahy.Tifrunner.gnm1.ann1.G7HRZN Arachis hypogaea HOM05D000595 ORTHO05D008454 5.9e-111 405.2 411 47.7
Nitab4.5_0000850g0080 Nicotiana tabacum HOM05D000595 ORTHO05D008454 5.9e-111 405.2 414 48.6
RcHm_v2.0_Chr4g0415411 Rosa chinensis HOM05D000595 ORTHO05D008454 5.9e-111 405.2 403 48.4
Thhalv10007628m.g Eutrema salsugineum HOM05D000595 ORTHO05D008454 7.7e-111 404.8 404 49.3
Os01g0911900 Oryza sativa ssp. japonica HOM05D000595 ORTHO05D008454 7.7e-111 404.8 407 48.4
PGR083G2732 Punica granatum HOM05D000595 ORTHO05D008454 7.7e-111 404.8 403 47.9
TWI53G1083 Tripterygium wilfordii HOM05D000595 ORTHO05D008454 7.7e-111 404.8 404 48.8
Phvul.006G125200 Phaseolus vulgaris HOM05D000595 ORTHO05D008454 1.0e-110 404.4 403 47.6
arahy.Tifrunner.gnm1.ann1.897VZR Arachis hypogaea HOM05D000595 ORTHO05D008454 1.3e-110 404.1 411 47.7
FvH4_4g15840 Fragaria vesca HOM05D000595 ORTHO05D008454 1.3e-110 404.1 403 48.4
Nitab4.5_0000676g0200 Nicotiana tabacum HOM05D000595 ORTHO05D008454 1.3e-110 404.1 407 48.2
Ca_00886_v3 Cicer arietinum L. HOM05D000595 ORTHO05D001274 1.7e-110 403.7 403 48.1
Gorai.011G158900 Gossypium raimondii HOM05D000595 ORTHO05D008454 2.2e-110 403.3 403 48.6
Sc13g0000130 Simmondsia chinensis HOM05D000595 ORTHO05D008454 2.2e-110 403.3 403 46.9
A10p03330 Brassica napus HOM05D000595 ORTHO05D008454 2.9e-110 402.9 404 48.5
BraA10t42609Z Brassica rapa HOM05D000595 ORTHO05D008454 2.9e-110 402.9 404 48.5
Aa31LG1G19900 Aethionema arabicum HOM05D000595 ORTHO05D008454 3.8e-110 402.5 406 49.0
Lalb_Chr15g0088911 Lupinus albus HOM05D000595 ORTHO05D008454 3.8e-110 402.5 403 47.6
AL1G14620 Arabidopsis lyrata HOM05D000595 ORTHO05D008454 5.0e-110 402.1 404 48.8
HPP92_008949 Vanilla planifolia HOM05D000595 ORTHO05D008454 8.5e-110 401.4 403 47.6
AT1G04900 Arabidopsis thaliana HOM05D000595 ORTHO05D008454 1.9e-109 400.2 404 48.8
FAN12G2005 Fragaria x ananassa HOM05D000595 ORTHO05D008454 1.9e-109 400.2 401 48.4
Duzib151G0403 Durio zibethinus HOM05D000595 ORTHO05D008454 2.5e-109 399.8 403 47.9
Sed0004774 Sechium edule HOM05D000595 ORTHO05D008454 2.5e-109 399.8 404 47.8
C05p03050 Brassica napus HOM05D000595 ORTHO05D008454 4.2e-109 399.1 404 48.3
BolC5t29087H Brassica oleracea HOM05D000595 ORTHO05D008454 4.2e-109 399.1 404 48.3
Thecc.04G204800 Theobroma cacao HOM05D000595 ORTHO05D008454 5.5e-109 398.7 403 47.9
Ah.13g078130 Amaranthus hybridus HOM05D000595 ORTHO05D008454 9.4e-109 397.9 406 47.5
Nitab4.5_0005206g0070 Nicotiana tabacum HOM05D000595 ORTHO05D008454 9.4e-109 397.9 423 46.8
Migut.N00379 Erythranthe guttata HOM05D000595 ORTHO05D008454 2.7e-108 396.4 403 47.9
Potri.001G314700 Populus trichocarpa HOM05D000595 ORTHO05D008454 6.1e-108 395.2 405 47.4
AagrBONN_evm.TU.Sc2ySwM_344.3272 Anthoceros agrestis HOM05D000595 ORTHO05D008454 7.9e-108 394.8 404 48.0
THA.LOC104801033 Tarenaya hassleriana HOM05D000595 ORTHO05D008454 7.9e-108 394.8 404 47.0
CsaV3_1G042950 Cucumis sativus L. HOM05D000595 ORTHO05D008454 1.0e-107 394.4 406 47.5
Mapoly0090s0077 Marchantia polymorpha HOM05D000595 ORTHO05D008454 1.4e-107 394.0 406 48.8
EL10Ac3g07487 Beta vulgaris HOM05D000595 ORTHO05D008454 7.4e-106 388.3 405 46.2
ClCG05G003330 Citrullus lanatus HOM05D000595 ORTHO05D008454 6.3e-105 385.2 404 47.0
Lsat_1_v5_gn_6_60501 Lactuca sativa HOM05D000595 ORTHO05D008454 1.4e-101 374.0 340 50.9
Ciclev10005247m.g Citrus clementina HOM05D000595 ORTHO05D008454 2.5e-101 373.2 359 48.2
Actinidia37010 Actinidia chinensis HOM05D000595 ORTHO05D008454 1.6e-100 370.5 389 47.0
Gohir.A10G123700 Gossypium hirsutum HOM05D000595 ORTHO05D008454 1.6e-100 370.5 405 46.4
COL.COLO4_09879 Corchorus olitorius HOM05D000595 ORTHO05D008454 3.6e-100 369.4 368 48.6
ECA233G5324 Erigeron canadensis HOM05D000595 ORTHO05D008454 1.0e-99 367.9 372 48.4
MELO3C015176.2 Cucumis melo HOM05D000595 ORTHO05D008454 6.7e-99 365.2 430 43.5
CARHR004300 Cardamine hirsuta HOM05D000595 ORTHO05D008454 8.8e-99 364.8 404 46.0
Gohir.D10G142300 Gossypium hirsutum HOM05D000595 ORTHO05D008454 1.1e-98 364.4 359 48.7
Sabra16G0199100 Salix brachista HOM05D000595 ORTHO05D008454 9.7e-98 361.3 468 41.2
Rhsim09G0055700 Rhododendron simsii HOM05D000595 ORTHO05D008454 6.3e-97 358.6 516 38.6
Sp1g03740 Schrenkiella parvula HOM05D000595 ORTHO05D008454 7.7e-95 351.7 332 50.6
Medtr2g031240 Medicago truncatula HOM05D000595 ORTHO05D008454 7.2e-93 345.1 332 49.7
vmacro00479 Vaccinium macrocarpon HOM05D000595 ORTHO05D008454 2.1e-92 343.6 528 36.7
AUR62020816 Chenopodium quinoa HOM05D000595 ORTHO05D008454 4.4e-90 335.9 343 45.8
FAN07G1333 Fragaria x ananassa HOM05D000595 ORTHO05D008454 7.5e-90 335.1 403 43.4
DCAR_002262 Daucus carota HOM05D000595 ORTHO05D008454 3.7e-89 332.8 359 46.8
GSVIVG01000528001 Vitis vinifera HOM05D000595 ORTHO05D008454 1.1e-88 331.3 343 46.1
Haze_11606 Corylus avellana HOM05D000595 ORTHO05D008454 4.5e-87 325.9 340 46.8
FAN19G1967 Fragaria x ananassa HOM05D000595 ORTHO05D008454 7.7e-87 325.1 406 41.9
Lj6A570G15 Lonicera japonica HOM05D000595 ORTHO05D008454 1.1e-85 321.2 428 40.0
SGA_v2.0_scaffold216G42389 Striga asiatica HOM05D000595 ORTHO05D008454 1.9e-85 320.5 339 46.0
Manes.15G053200 Manihot esculenta HOM05D000595 ORTHO05D008454 2.7e-84 316.6 306 49.0
QL06p024408 Quercus lobata HOM05D000595 ORTHO05D008454 8.0e-84 315.1 317 48.6
AUR62032918 Chenopodium quinoa HOM05D000595 ORTHO05D008454 9.8e-74 281.6 342 42.1
CiPaw.01G121900 Carya illinoinensis HOM05D000595 ORTHO05D008454 1.5e-69 267.7 281 44.5
unitig_744.g24024 Utricularia gibba HOM05D000595 ORTHO05D008454 1.9e-69 267.3 312 42.9
MCO01G355 Micromonas commoda HOM05D000595 ORTHO05D008454 4.1e-64 249.6 432 34.7
PRCOL_00005088 Prasinoderma coloniale HOM05D000595 ORTHO05D008454 1.9e-61 240.7 404 35.4
Cpa.g.sc59.134 Carica papaya HOM05D000595 ORTHO05D008454 4.6e-55 219.5 230 46.5
SEGI_10928 Sequoiadendron giganteum HOM05D000595 ORTHO05D008454 2.3e-54 217.2 230 47.4
Zm00001eb143660 Zea mays HOM05D000595 ORTHO05D008454 1.1e-53 214.9 200 50.0
Cre13.g584700 Chlamydomonas reinhardtii HOM05D000595 ORTHO05D008454 2.1e-44 184.1 421 28.3
FvH4_1g23291 Fragaria vesca HOM05D000595 ORTHO05D008454 2.8e-44 183.7 202 45.0
Cfa022406 Carpinus fangiana HOM05D000595 ORTHO05D008454 1.7e-41 174.5 431 31.1
CBR_g19088 Chara braunii HOM05D000019 ORTHO05D000048 5.4e-40 169.5 176 46.6
CiPaw.01G121800 Carya illinoinensis HOM05D000595 ORTHO05D008454 3.9e-30 136.7 124 50.8
FAN17G1124 Fragaria x ananassa HOM05D000595 ORTHO05D008454 4.3e-29 133.3 130 52.3
Actinidia33191 Actinidia chinensis HOM05D000595 ORTHO05D008454 1.1e-27 128.6 157 45.9
AagrBONN_evm.TU.Sc2ySwM_368.462 Anthoceros agrestis HOM05D000595 ORTHO05D006346 3.8e-25 120.2 129 46.5
Oeu016734.1 Olea europaea HOM05D000595 ORTHO05D008454 4.9e-25 119.8 120 46.7
CsaV3_6G039270 Cucumis sativus L. HOM05D000595 ORTHO05D008454 4.0e-19 100.1 114 45.6
QL06p024418 Quercus lobata HOM05D000595 ORTHO05D008454 5.3e-19 99.8 111 42.3
EL10Ac4g09027 Beta vulgaris HOM05D000595 ORTHO05D008454 3.5e-15 87.0 116 39.7
unitig_744.g24023 Utricularia gibba HOM05D000595 ORTHO05D008454 2.5e-13 80.9 65 58.5
CsaV3_6G039250 Cucumis sativus L. HOM05D000595 ORTHO05D008454 8.2e-12 75.9 61 55.7
SEGI_41312 Sequoiadendron giganteum HOM05D000595 ORTHO05D008454 4.1e-11 73.6 50 58.0
GSVIVG01000526001 Vitis vinifera HOM05D000595 ORTHO05D008454 5.8e-10 69.7 82 42.7
CDE09G0179 Ceratophyllum demersum HOM05D000595 ORTHO05D008454 1.1e-08 65.5 74 40.5


User provided reference genes

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