Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO367G0899 Selaginella moellendorffii HOM05D006579 ORTHO05D007783 2.9e-67 258.5 133 100.0
Mapoly0012s0210 Marchantia polymorpha HOM05D006579 ORTHO05D007783 5.9e-44 181.0 132 74.2
Pp3c6_17910 Physcomitrium patens HOM05D006579 ORTHO05D007783 8.5e-43 177.2 132 72.0
Hund07814 Selenicereus undatus HOM05D006579 ORTHO05D007783 4.2e-42 174.9 134 70.9
EL10Ac9g20927 Beta vulgaris HOM05D006579 ORTHO05D007783 2.1e-41 172.6 134 70.1
HPP92_013492 Vanilla planifolia HOM05D006579 ORTHO05D007783 1.0e-40 170.2 132 68.2
AagrBONN_evm.TU.Sc2ySwM_117.1030 Anthoceros agrestis HOM05D006579 ORTHO05D007783 2.3e-40 169.1 136 68.4
ATR0796G267 Amborella trichopoda HOM05D006579 ORTHO05D007783 3.0e-40 168.7 134 67.2
HPP92_026046 Vanilla planifolia HOM05D006579 ORTHO05D007783 3.0e-40 168.7 132 67.4
Manes.14G164500 Manihot esculenta HOM05D006579 ORTHO05D007783 5.2e-40 167.9 134 69.4
Carub.0001s0137 Capsella rubella HOM05D006579 ORTHO05D007783 6.7e-40 167.5 134 67.2
Nn8g39570 Nelumbo nucifera HOM05D006579 ORTHO05D007783 6.7e-40 167.5 134 69.4
AT1G02330 Arabidopsis thaliana HOM05D006579 ORTHO05D007783 1.1e-39 166.8 134 67.2
Ciclev10021552m.g Citrus clementina HOM05D006579 ORTHO05D007783 1.1e-39 166.8 139 68.3
Gohir.A11G106100 Gossypium hirsutum HOM05D006579 ORTHO05D007783 1.5e-39 166.4 134 69.4
Gohir.D11G111000 Gossypium hirsutum HOM05D006579 ORTHO05D007783 1.5e-39 166.4 134 69.4
Sc12g0008270 Simmondsia chinensis HOM05D006579 ORTHO05D007783 1.5e-39 166.4 136 69.9
CARHR001640 Cardamine hirsuta HOM05D006579 ORTHO05D007783 2.0e-39 166.0 134 67.9
Aa31LG1G10170 Aethionema arabicum HOM05D006579 ORTHO05D007783 2.6e-39 165.6 134 67.2
AUR62037602 Chenopodium quinoa HOM05D006579 ORTHO05D007783 2.6e-39 165.6 134 66.4
THA.LOC104825921 Tarenaya hassleriana HOM05D006579 ORTHO05D007783 2.6e-39 165.6 134 67.2
Thecc.01G328000 Theobroma cacao HOM05D006579 ORTHO05D007783 2.6e-39 165.6 134 68.7
Duzib138G1509 Durio zibethinus HOM05D006579 ORTHO05D007783 3.3e-39 165.2 134 68.7
GSVIVG01028219001 Vitis vinifera HOM05D006579 ORTHO05D007783 4.4e-39 164.9 136 68.4
COL.COLO4_23096 Corchorus olitorius HOM05D006579 ORTHO05D007783 5.7e-39 164.5 134 68.7
Gorai.007G118800 Gossypium raimondii HOM05D006579 ORTHO05D007783 5.7e-39 164.5 134 68.7
Sp1g01410 Schrenkiella parvula HOM05D006579 ORTHO05D007783 5.7e-39 164.5 134 68.7
TAR362G0572 Trochodendron aralioides HOM05D006579 ORTHO05D007783 7.4e-39 164.1 134 71.6
Cpa.g.sc57.48 Carica papaya HOM05D006579 ORTHO05D007783 9.7e-39 163.7 134 68.7
Thhalv10008452m.g Eutrema salsugineum HOM05D006579 ORTHO05D007783 9.7e-39 163.7 134 67.2
Pp3c5_5390 Physcomitrium patens HOM05D006579 ORTHO05D007783 9.7e-39 163.7 132 67.4
AL1G11660 Arabidopsis lyrata HOM05D006579 ORTHO05D007783 1.3e-38 163.3 134 67.2
Dinv33186 Davidia involucrata HOM05D006579 ORTHO05D007783 2.2e-38 162.5 144 64.6
BraA10t42384Z Brassica rapa HOM05D006579 ORTHO05D007783 3.7e-38 161.8 134 67.2
arahy.Tifrunner.gnm1.ann1.E1WP71 Arachis hypogaea HOM05D006579 ORTHO05D007783 4.8e-38 161.4 140 65.0
BcaC05g24612 Brassica carinata HOM05D006579 ORTHO05D007783 6.3e-38 161.0 134 67.2
C05p01100 Brassica napus HOM05D006579 ORTHO05D007783 6.3e-38 161.0 134 67.2
Aqoxy2G02395 Aquilegia oxysepala HOM05D006579 ORTHO05D007783 8.2e-38 160.6 145 63.4
Potri.014G110200 Populus trichocarpa HOM05D006579 ORTHO05D007783 1.1e-37 160.2 135 65.9
arahy.Tifrunner.gnm1.ann1.3317JQ Arachis hypogaea HOM05D006579 ORTHO05D007783 2.4e-37 159.1 140 64.3
BolC5t28891H Brassica oleracea HOM05D006579 ORTHO05D007783 2.4e-37 159.1 134 66.4
DCAR_018237 Daucus carota HOM05D006579 ORTHO05D007783 4.1e-37 158.3 139 64.0
Psat6g157680 Pisum sativum HOM05D006579 ORTHO05D007783 5.3e-37 157.9 142 62.7
Phvul.007G207700 Phaseolus vulgaris HOM05D006579 ORTHO05D007783 7.0e-37 157.5 139 62.6
TWI23G0058 Tripterygium wilfordii HOM05D006579 ORTHO05D007783 7.0e-37 157.5 135 66.7
VMungo0720G0607 Vigna mungo HOM05D006579 ORTHO05D007783 7.0e-37 157.5 139 62.6
Lj5g0006855 Lotus japonicus HOM05D006579 ORTHO05D007783 9.1e-37 157.1 139 62.6
MBI15_g35678_MAGBIO Magnolia biondii HOM05D006579 ORTHO05D007783 9.1e-37 157.1 135 65.2
Cc06_g22680 Coffea canephora HOM05D006579 ORTHO05D007783 1.2e-36 156.8 143 63.6
Glyma.02G006400 Glycine max HOM05D006579 ORTHO05D007783 3.5e-36 155.2 139 62.6
Ca_10226_v3 Cicer arietinum L. HOM05D006579 ORTHO05D007783 4.5e-36 154.8 140 62.9
Lsat_1_v5_gn_1_78561 Lactuca sativa HOM05D006579 ORTHO05D007783 4.5e-36 154.8 143 61.5
Medtr1g085470 Medicago truncatula HOM05D006579 ORTHO05D007783 5.9e-36 154.5 142 61.3
Eucgr.A00989 Eucalyptus grandis HOM05D006579 ORTHO05D007783 1.7e-35 152.9 144 63.9
PSO210G5405 Papaver somniferum HOM05D006579 ORTHO05D007783 1.7e-35 152.9 134 63.4
PSO761G0510 Papaver somniferum HOM05D006579 ORTHO05D007783 1.7e-35 152.9 134 63.4
Lalb_Chr06g0167181 Lupinus albus HOM05D006579 ORTHO05D007783 3.8e-35 151.8 139 59.7
Oeu038082.1 Olea europaea HOM05D006579 ORTHO05D007783 5.0e-35 151.4 148 60.1
PGR042G1939 Punica granatum HOM05D006579 ORTHO05D007783 5.0e-35 151.4 142 59.9
SalBow3G0048 Salvia bowleyana HOM05D006579 ORTHO05D007783 6.5e-35 151.0 141 63.1
SHI19775 Sapria himalayana HOM05D006579 ORTHO05D007783 6.5e-35 151.0 134 63.4
CAN.G179.22 Capsicum annuum HOM05D006579 ORTHO05D007783 8.5e-35 150.6 145 62.1
Glyma.10G140000 Glycine max HOM05D006579 ORTHO05D007783 8.5e-35 150.6 139 60.4
Sabra14G0081200 Salix brachista HOM05D006579 ORTHO05D007783 1.1e-34 150.2 166 56.0
TPR.G3075 Trifolium pratense HOM05D006579 ORTHO05D007783 1.5e-34 149.8 143 60.1
Solyc01g068580.4 Solanum lycopersicum HOM05D006579 ORTHO05D007783 4.2e-34 148.3 148 60.1
PGSC0003DMG400000840 Solanum tuberosum HOM05D006579 ORTHO05D007783 5.5e-34 147.9 146 61.0
Actinidia21333 Actinidia chinensis HOM05D006579 ORTHO05D007783 7.2e-34 147.5 128 64.8
Cfa004929 Carpinus fangiana HOM05D006579 ORTHO05D007783 7.2e-34 147.5 157 58.0
Sopen01g030530 Solanum pennellii HOM05D006579 ORTHO05D007783 7.2e-34 147.5 150 58.7
Lalb_Chr21g0309921 Lupinus albus HOM05D006579 ORTHO05D007783 9.4e-34 147.1 139 59.7
HanXRQChr01g0017841 Helianthus annuus HOM05D006579 ORTHO05D007783 1.2e-33 146.7 144 59.0
Nitab4.5_0002103g0080 Nicotiana tabacum HOM05D006579 ORTHO05D007783 1.2e-33 146.7 150 58.0
Zm00001eb018120 Zea mays HOM05D006579 ORTHO05D007783 1.2e-33 146.7 136 58.8
Migut.D00005 Erythranthe guttata HOM05D006579 ORTHO05D007783 1.6e-33 146.4 144 58.3
ECA248G0873 Erigeron canadensis HOM05D006579 ORTHO05D007783 2.1e-33 146.0 143 59.4
Nitab4.5_0001628g0050 Nicotiana tabacum HOM05D006579 ORTHO05D007783 2.1e-33 146.0 150 58.0
MELO3C005183.2 Cucumis melo HOM05D006579 ORTHO05D007783 2.7e-33 145.6 160 53.1
ClCG01G007260 Citrullus lanatus HOM05D006579 ORTHO05D007783 4.7e-33 144.8 160 53.1
CsaV3_5G018690 Cucumis sativus L. HOM05D006579 ORTHO05D007783 4.7e-33 144.8 160 53.1
CANSAT25G2874 Cannabis sativa HOM05D006579 ORTHO05D007783 3.0e-32 142.1 157 55.4
Sed0009510 Sechium edule HOM05D006579 ORTHO05D007783 3.0e-32 142.1 152 53.9
QL09p037462 Quercus lobata HOM05D006579 ORTHO05D007783 4.0e-32 141.7 162 53.7
Atru.chr5.832 Acer truncatum HOM05D006579 ORTHO05D007783 1.2e-31 140.2 138 58.0
Prupe.3G000500 Prunus persica HOM05D006579 ORTHO05D007783 1.2e-31 140.2 165 52.7
CiPaw.07G127500 Carya illinoinensis HOM05D006579 ORTHO05D007783 1.5e-31 139.8 157 55.4
unitig_747.g21528 Utricularia gibba HOM05D006579 ORTHO05D007783 2.0e-31 139.4 149 58.4
CSS0004948 Camellia sinensis var. sinensis HOM05D006579 ORTHO05D007783 5.7e-31 137.9 100 72.0
MD17G1285900 Malus domestica HOM05D006579 ORTHO05D007783 9.7e-31 137.1 167 52.1
MSTRG.18055 Avicennia marina HOM05D006579 ORTHO05D007783 1.7e-30 136.3 145 53.8
CBR_g3462 Chara braunii HOM05D006579 ORTHO05D007783 6.3e-30 134.4 132 55.3
SEGI_10424 Sequoiadendron giganteum HOM05D006579 ORTHO05D007783 1.8e-29 132.9 112 66.1
Os03g0374100 Oryza sativa ssp. japonica HOM05D006579 ORTHO05D007783 2.4e-29 132.5 144 52.1
FvH4_1g26040 Fragaria vesca HOM05D006579 ORTHO05D007783 4.1e-29 131.7 138 52.9
FAN19G0998 Fragaria x ananassa HOM05D006579 ORTHO05D007783 4.1e-29 131.7 138 52.9
FAN23G1885 Fragaria x ananassa HOM05D006579 ORTHO05D007783 4.1e-29 131.7 138 52.9
FAN23G2819 Fragaria x ananassa HOM05D006579 ORTHO05D007783 4.1e-29 131.7 138 52.9
FAN28G1483 Fragaria x ananassa HOM05D006579 ORTHO05D007783 4.1e-29 131.7 138 52.9
Peaxi162Scf00309g00059 Petunia axillaris HOM05D006579 ORTHO05D007783 2.0e-28 129.4 92 70.7
RcHm_v2.0_Chr3g0485501 Rosa chinensis HOM05D006579 ORTHO05D007783 1.9e-26 122.9 163 47.9
Ah.01g015750 Amaranthus hybridus HOM05D006579 ORTHO05D007783 2.5e-26 122.5 110 62.7
AUR62039016 Chenopodium quinoa HOM05D006579 ORTHO05D007783 2.7e-25 119.0 109 60.6
SGA_v2.0_scaffold417G51243 Striga asiatica HOM05D006579 ORTHO05D007783 1.0e-24 117.1 174 44.3
FAN26G1368 Fragaria x ananassa HOM05D006579 ORTHO05D007783 1.8e-24 116.3 167 43.7
Hma1.2p1_1372F.1_g278650 Hydrangea macrophylla HOM05D006579 ORTHO05D007783 1.2e-20 103.6 72 70.8
Haze_05169 Corylus avellana HOM05D006579 ORTHO05D007783 1.7e-19 99.8 133 51.9
Rhsim01G0001200 Rhododendron simsii HOM05D006579 ORTHO05D007783 1.6e-17 93.2 65 70.8
CSS0018503 Camellia sinensis var. sinensis HOM05D006579 ORTHO05D007783 3.0e-16 89.0 66 68.2
COL.COLO4_00282 Corchorus olitorius HOM05D006579 ORTHO05D007783 5.4e-13 78.2 68 66.2
Rhsim01G0001100 Rhododendron simsii HOM05D006579 ORTHO05D007783 2.7e-12 75.9 81 58.0
MCO04G420 Micromonas commoda HOM05D006579 ORTHO05D007783 7.8e-12 74.3 89 48.3
vmacro02349 Vaccinium macrocarpon HOM05D006579 ORTHO05D007783 2.9e-11 72.4 77 61.0


User provided reference genes

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