Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO367G0821 Selaginella moellendorffii HOM05D000300 ORTHO05D008505 3.8e-79 298.1 152 100.0
Aqoxy1G02483 Aquilegia oxysepala HOM05D000300 ORTHO05D008505 9.4e-54 213.8 149 72.5
Mapoly0026s0140 Marchantia polymorpha HOM05D000300 ORTHO05D008505 2.3e-52 209.1 151 72.8
Potri.011G121000 Populus trichocarpa HOM05D000300 ORTHO05D008505 2.3e-52 209.1 149 73.2
Duzib213G0972 Durio zibethinus HOM05D000300 ORTHO05D008505 3.9e-52 208.4 149 69.1
Manes.03G111900 Manihot esculenta HOM05D000300 ORTHO05D008505 6.7e-52 207.6 149 71.8
Nn1g06576 Nelumbo nucifera HOM05D000300 ORTHO05D008505 8.8e-52 207.2 149 71.1
SEGI_35024 Sequoiadendron giganteum HOM05D000300 ORTHO05D008505 8.8e-52 207.2 150 70.7
GSVIVG01014363001 Vitis vinifera HOM05D000300 ORTHO05D000383 1.5e-51 206.5 149 69.8
Dinv04313 Davidia involucrata HOM05D000300 ORTHO05D008505 2.0e-51 206.1 149 71.1
Cc05_g12170 Coffea canephora HOM05D000300 ORTHO05D000383 2.6e-51 205.7 149 70.5
MELO3C016520.2 Cucumis melo HOM05D000300 ORTHO05D008505 7.4e-51 204.1 149 71.1
CsaV3_3G006220 Cucumis sativus L. HOM05D000300 ORTHO05D008505 7.4e-51 204.1 149 71.1
FvH4_3g20100 Fragaria vesca HOM05D000300 ORTHO05D008505 7.4e-51 204.1 150 69.3
FAN11G2262 Fragaria x ananassa HOM05D000300 ORTHO05D008505 7.4e-51 204.1 150 69.3
Os04g0530300 Oryza sativa ssp. japonica HOM05D000300 ORTHO05D008505 9.7e-51 203.8 150 72.0
CSS0002162 Camellia sinensis var. sinensis HOM05D000300 ORTHO05D008505 1.3e-50 203.4 149 69.8
Glyma.13G278100 Glycine max HOM05D000300 ORTHO05D008505 1.3e-50 203.4 150 70.7
VMungo1080G0699 Vigna mungo HOM05D000300 ORTHO05D008505 1.3e-50 203.4 150 70.7
ClCG10G006870 Citrullus lanatus HOM05D000300 ORTHO05D008505 1.7e-50 203.0 149 70.5
Sabra11G0105000 Salix brachista HOM05D000300 ORTHO05D008505 1.7e-50 203.0 149 70.5
Thecc.07G080900 Theobroma cacao HOM05D000300 ORTHO05D008505 2.2e-50 202.6 149 69.1
MSTRG.6839 Avicennia marina HOM05D000300 ORTHO05D008505 2.8e-50 202.2 149 70.5
FAN21G2789 Fragaria x ananassa HOM05D000300 ORTHO05D008505 3.7e-50 201.8 150 68.7
Phvul.005G071500 Phaseolus vulgaris HOM05D000300 ORTHO05D008505 3.7e-50 201.8 150 70.0
RcHm_v2.0_Chr5g0033901 Rosa chinensis HOM05D000300 ORTHO05D008505 3.7e-50 201.8 150 68.7
Ciclev10007647m.g Citrus clementina HOM05D000300 ORTHO05D000383 4.8e-50 201.4 150 70.0
Prupe.4G183600 Prunus persica HOM05D000300 ORTHO05D008505 4.8e-50 201.4 150 68.0
ATR0680G062 Amborella trichopoda HOM05D000300 ORTHO05D008505 6.3e-50 201.1 150 70.7
CiPaw.11G167900 Carya illinoinensis HOM05D000300 ORTHO05D008505 8.2e-50 200.7 149 69.1
Glyma.12G223300 Glycine max HOM05D000300 ORTHO05D008505 1.1e-49 200.3 150 69.3
Atru.chr2.2664 Acer truncatum HOM05D000300 ORTHO05D008505 1.4e-49 199.9 149 68.5
Peaxi162Scf00000g00412 Petunia axillaris HOM05D000300 ORTHO05D008505 1.4e-49 199.9 149 68.5
PGSC0003DMG400015358 Solanum tuberosum HOM05D000300 ORTHO05D008505 1.4e-49 199.9 149 67.8
arahy.Tifrunner.gnm1.ann1.UT5NS3 Arachis hypogaea HOM05D000300 ORTHO05D008505 1.8e-49 199.5 150 69.3
arahy.Tifrunner.gnm1.ann1.Z7GNQ3 Arachis hypogaea HOM05D000300 ORTHO05D008505 1.8e-49 199.5 150 69.3
Migut.M00819 Erythranthe guttata HOM05D000300 ORTHO05D008505 1.8e-49 199.5 152 69.1
Gohir.A04G028900 Gossypium hirsutum HOM05D000300 ORTHO05D008505 1.8e-49 199.5 149 67.1
Gohir.D05G358300 Gossypium hirsutum HOM05D000300 ORTHO05D008505 1.8e-49 199.5 149 67.1
PSO541G3772 Papaver somniferum HOM05D000300 ORTHO05D008505 2.4e-49 199.1 149 67.8
Haze_09412 Corylus avellana HOM05D000300 ORTHO05D008505 3.1e-49 198.7 147 69.4
TWI38G1039 Tripterygium wilfordii HOM05D000300 ORTHO05D008505 3.1e-49 198.7 149 69.8
Hma1.2p1_1618F.1_g293900 Hydrangea macrophylla HOM05D000300 ORTHO05D008505 6.9e-49 197.6 149 67.8
PSO675G9140 Papaver somniferum HOM05D000300 ORTHO05D008505 9.1e-49 197.2 149 67.1
Lj3g0005060 Lotus japonicus HOM05D000300 ORTHO05D008505 1.2e-48 196.8 149 69.8
AagrBONN_evm.TU.Sc2ySwM_340.171 Anthoceros agrestis HOM05D000300 ORTHO05D008505 1.5e-48 196.4 152 69.1
Gorai.009G390800 Gossypium raimondii HOM05D000300 ORTHO05D008505 1.5e-48 196.4 149 66.4
vmacro11851 Vaccinium macrocarpon HOM05D000300 ORTHO05D008505 2.0e-48 196.1 149 67.1
MD03G1225800 Malus domestica HOM05D000300 ORTHO05D008505 2.6e-48 195.7 150 66.0
MD11G1245300 Malus domestica HOM05D000300 ORTHO05D008505 2.6e-48 195.7 150 66.0
QL08p020830 Quercus lobata HOM05D000300 ORTHO05D008505 2.6e-48 195.7 149 67.8
Oeu060546.1 Olea europaea HOM05D000300 ORTHO05D008505 7.7e-48 194.1 149 67.1
SGA_v2.0_scaffold34G13828 Striga asiatica HOM05D000300 ORTHO05D008505 7.7e-48 194.1 160 65.0
Psat3g101080 Pisum sativum HOM05D000300 ORTHO05D008505 1.0e-47 193.7 150 68.0
TPR.G38968 Trifolium pratense HOM05D000300 ORTHO05D008505 1.0e-47 193.7 150 68.7
Medtr2g079460 Medicago truncatula HOM05D000300 ORTHO05D008505 1.7e-47 193.0 151 66.9
CANSAT56G2812 Cannabis sativa HOM05D000300 ORTHO05D008505 2.2e-47 192.6 149 66.4
THA.LOC104813391 Tarenaya hassleriana HOM05D000300 ORTHO05D008505 2.9e-47 192.2 149 65.1
Rhsim06G0197200 Rhododendron simsii HOM05D000300 ORTHO05D008505 8.5e-47 190.7 147 66.0
Cpa.g.sc80.49 Carica papaya HOM05D000300 ORTHO05D008505 1.1e-46 190.3 137 72.3
Lalb_Chr20g0109791 Lupinus albus HOM05D000300 ORTHO05D008505 1.1e-46 190.3 150 67.3
Ca_01834_v3 Cicer arietinum L. HOM05D000300 ORTHO05D008505 1.9e-46 189.5 147 68.7
unitig_747.g21571 Utricularia gibba HOM05D000300 ORTHO05D008505 4.2e-46 188.3 147 66.7
HPP92_025994 Vanilla planifolia HOM05D000300 ORTHO05D008505 4.2e-46 188.3 149 67.1
Pp3c25_13690 Physcomitrium patens HOM05D000300 ORTHO05D008505 7.2e-46 187.6 151 66.9
CDE02G0965 Ceratophyllum demersum HOM05D000300 ORTHO05D008505 1.6e-45 186.4 147 66.7
DCAR_013093 Daucus carota HOM05D000300 ORTHO05D008505 1.0e-44 183.7 149 64.4
SalBow7G1295 Salvia bowleyana HOM05D000300 ORTHO05D008505 1.4e-44 183.3 150 66.7
SalBow7G3546 Salvia bowleyana HOM05D000300 ORTHO05D008505 1.4e-44 183.3 150 66.7
PGR031G2267 Punica granatum HOM05D000300 ORTHO05D008505 1.8e-44 183.0 149 64.4
MD11G1245600 Malus domestica HOM05D000300 ORTHO05D008505 3.9e-44 181.8 150 63.3
Sp6g15870 Schrenkiella parvula HOM05D000300 ORTHO05D008505 3.9e-44 181.8 149 62.4
BcaB08g35739 Brassica carinata HOM05D000300 ORTHO05D008505 6.7e-44 181.0 149 62.4
AL8G28840 Arabidopsis lyrata HOM05D000300 ORTHO05D008505 8.8e-44 180.6 149 62.4
AT5G53800 Arabidopsis thaliana HOM05D000300 ORTHO05D008505 8.8e-44 180.6 149 62.4
ECA240G3136 Erigeron canadensis HOM05D000300 ORTHO05D008505 8.8e-44 180.6 149 61.7
Thhalv10013922m.g Eutrema salsugineum HOM05D000300 ORTHO05D008505 8.8e-44 180.6 149 61.7
Carub.0008s1409 Capsella rubella HOM05D000300 ORTHO05D008505 1.5e-43 179.9 149 61.7
BcaC04g20418 Brassica carinata HOM05D000300 ORTHO05D008505 2.0e-43 179.5 149 61.7
A10p11170 Brassica napus HOM05D000300 ORTHO05D008505 2.0e-43 179.5 149 61.7
C09p43740 Brassica napus HOM05D000300 ORTHO05D008505 2.0e-43 179.5 149 61.7
BolC9t57259H Brassica oleracea HOM05D000300 ORTHO05D008505 2.0e-43 179.5 149 61.7
BraA10t43209Z Brassica rapa HOM05D000300 ORTHO05D008505 2.0e-43 179.5 149 61.7
Sc16g0006940 Simmondsia chinensis HOM05D000300 ORTHO05D008505 1.3e-42 176.8 172 57.0
Zm00001eb075780 Zea mays HOM05D000300 ORTHO05D008505 1.3e-42 176.8 137 67.9
Lsat_1_v5_gn_9_97040 Lactuca sativa HOM05D000300 ORTHO05D008505 2.2e-42 176.0 149 60.4
Solyc12g013790.3 Solanum lycopersicum HOM05D000300 ORTHO05D008505 2.8e-42 175.6 149 61.1
Sopen12g007100 Solanum pennellii HOM05D000300 ORTHO05D008505 2.8e-42 175.6 149 61.1
Sed0021435 Sechium edule HOM05D000300 ORTHO05D008505 2.4e-41 172.6 149 62.4
Hma1.2p1_1738F.1_g299980 Hydrangea macrophylla HOM05D000300 ORTHO05D008505 4.1e-41 171.8 149 60.4
Nitab4.5_0007374g0020 Nicotiana tabacum HOM05D000300 ORTHO05D008505 4.1e-41 171.8 198 51.5
Hund02219 Selenicereus undatus HOM05D000300 ORTHO05D008505 1.7e-39 166.4 149 60.4
Aa31LG3G10120 Aethionema arabicum HOM05D000300 ORTHO05D008505 3.8e-39 165.2 177 51.4
Ah.04g164930 Amaranthus hybridus HOM05D000300 ORTHO05D008505 6.5e-39 164.5 149 60.4
HanXRQChr03g0078531 Helianthus annuus HOM05D000300 ORTHO05D008505 8.5e-39 164.1 137 62.8
Nitab4.5_0000662g0230 Nicotiana tabacum HOM05D000300 ORTHO05D008505 6.3e-34 147.9 170 50.6
FAN16G2347 Fragaria x ananassa HOM05D000300 ORTHO05D008505 1.1e-33 147.1 120 65.8
CDE01G0218 Ceratophyllum demersum HOM05D005098 ORTHO05D006646 8.5e-31 137.5 115 62.6
AUR62029376 Chenopodium quinoa HOM05D000300 ORTHO05D008505 1.2e-24 117.1 106 60.4
AUR62034261 Chenopodium quinoa HOM05D000300 ORTHO05D008505 1.2e-24 117.1 106 60.4
COL.COLO4_09413 Corchorus olitorius HOM05D000300 ORTHO05D008505 1.6e-21 106.7 90 65.6
MCO10G111 Micromonas commoda HOM05D000300 ORTHO05D008505 6.1e-21 104.8 152 38.8
Cre03.g176050 Chlamydomonas reinhardtii HOM05D000300 ORTHO05D008505 3.4e-19 99.0 152 42.8
EL10Ac4g08146 Beta vulgaris HOM05D000300 ORTHO05D008505 4.4e-19 98.6 125 48.8
Actinidia12817 Actinidia chinensis HOM05D000300 ORTHO05D008505 9.8e-19 97.4 52 78.8
CBR_g12199 Chara braunii HOM05D000300 ORTHO05D008505 1.4e-17 93.6 48 85.4
FAN25G2371 Fragaria x ananassa HOM05D000300 ORTHO05D008505 4.1e-17 92.0 48 81.2
Nn1g04059 Nelumbo nucifera HOM05D000300 ORTHO05D008505 4.5e-16 88.6 78 57.7
GSVIVG01021702001 Vitis vinifera HOM05D000300 ORTHO05D008505 4.3e-14 82.0 80 61.2
MD11G1132100 Malus domestica HOM05D000300 ORTHO05D008505 1.2e-13 80.5 47 72.3
GSVIVG01021454001 Vitis vinifera HOM05D000300 ORTHO05D008505 1.2e-13 80.5 80 60.0
arahy.Tifrunner.gnm1.ann1.MM4FDC Arachis hypogaea HOM05D000300 ORTHO05D008505 8.0e-13 77.8 87 55.2
TAR626G1261 Trochodendron aralioides HOM05D000300 ORTHO05D008505 7.5e-11 71.2 65 60.0
AL8G13240 Arabidopsis lyrata HOM05D000300 ORTHO05D008505 9.8e-11 70.9 68 57.4
GSVIVG01014364001 Vitis vinifera HOM05D000300 ORTHO05D008505 9.2e-09 64.3 32 81.2
arahy.Tifrunner.gnm1.ann1.5AH57W Arachis hypogaea HOM05D000300 ORTHO05D008505 7.8e-08 61.2 51 66.7
FAN25G3258 Fragaria x ananassa HOM05D000300 ORTHO05D008505 3.9e-07 58.9 65 53.8
arahy.Tifrunner.gnm1.ann1.MF7AUF Arachis hypogaea HOM05D003391 ORTHO05D008505 1.1e-06 57.4 37 75.7
arahy.Tifrunner.gnm1.ann1.F96EFF Arachis hypogaea HOM05D003444 ORTHO05D008505 1.5e-06 57.0 64 53.1
arahy.Tifrunner.gnm1.ann1.1E0HE3 Arachis hypogaea HOM05D001903 ORTHO05D013215 2.5e-06 56.2 40 70.0


User provided reference genes

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