Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO367G0798 Selaginella moellendorffii HOM05D006681 ORTHO05D008338 1.2e-163 579.7 280 100.0
Pp3c11_23040 Physcomitrium patens HOM05D006681 ORTHO05D008338 5.5e-92 341.7 280 58.2
MD11G1116600 Malus domestica HOM05D006681 ORTHO05D008338 2.1e-91 339.7 279 59.5
FAN16G0358 Fragaria x ananassa HOM05D006681 ORTHO05D008338 3.6e-91 339.0 278 58.6
TAR633G1649 Trochodendron aralioides HOM05D006681 ORTHO05D008338 4.6e-91 338.6 279 57.7
arahy.Tifrunner.gnm1.ann1.SK7GFS Arachis hypogaea HOM05D006681 ORTHO05D008338 7.9e-91 337.8 274 58.0
FvH4_3g34680 Fragaria vesca HOM05D006681 ORTHO05D008338 2.3e-90 336.3 276 59.1
FAN11G3596 Fragaria x ananassa HOM05D006681 ORTHO05D008338 2.3e-90 336.3 276 59.1
Nn2g10531 Nelumbo nucifera HOM05D006681 ORTHO05D008338 2.3e-90 336.3 279 57.7
RcHm_v2.0_Chr5g0062361 Rosa chinensis HOM05D006681 ORTHO05D008338 2.3e-90 336.3 276 59.4
Os05g0117500 Oryza sativa ssp. japonica HOM05D006681 ORTHO05D008338 8.8e-90 334.3 279 57.7
arahy.Tifrunner.gnm1.ann1.FZI6FG Arachis hypogaea HOM05D006681 ORTHO05D008338 1.1e-89 334.0 274 57.3
HanXRQChr05g0134071 Helianthus annuus HOM05D006681 ORTHO05D008338 2.5e-89 332.8 277 57.0
Cc01_g12140 Coffea canephora HOM05D006681 ORTHO05D008338 4.8e-88 328.6 278 56.8
Lsat_1_v5_gn_8_78740 Lactuca sativa HOM05D006681 ORTHO05D008338 2.4e-87 326.2 274 56.6
Zm00001eb266060 Zea mays HOM05D006681 ORTHO05D008338 3.1e-87 325.9 286 55.2
THA.LOC104814870 Tarenaya hassleriana HOM05D006681 ORTHO05D008338 4.1e-87 325.5 278 57.2
GSVIVG01025054001 Vitis vinifera HOM05D006681 ORTHO05D008338 4.1e-87 325.5 277 56.0
PSO339G5789 Papaver somniferum HOM05D006681 ORTHO05D008338 6.9e-87 324.7 285 56.1
Ca_19209_v3 Cicer arietinum L. HOM05D006681 ORTHO05D008338 9.1e-87 324.3 277 56.0
PSO384G0101 Papaver somniferum HOM05D006681 ORTHO05D008338 1.2e-86 323.9 285 56.5
TWI31G0387 Tripterygium wilfordii HOM05D006681 ORTHO05D008338 1.5e-86 323.6 278 56.5
Prupe.6G086900 Prunus persica HOM05D006681 ORTHO05D008338 2.6e-86 322.8 283 55.8
Aqoxy4G03072 Aquilegia oxysepala HOM05D006681 ORTHO05D008338 4.5e-86 322.0 279 55.9
HPP92_006593 Vanilla planifolia HOM05D006681 ORTHO05D008338 4.5e-86 322.0 286 55.6
ECA236G1321 Erigeron canadensis HOM05D006681 ORTHO05D008338 5.9e-86 321.6 278 56.1
AL5G24960 Arabidopsis lyrata HOM05D006681 ORTHO05D008338 1.0e-85 320.9 282 56.0
Potri.009G026700 Populus trichocarpa HOM05D006681 ORTHO05D008338 1.0e-85 320.9 278 55.4
Carub.0005s1203 Capsella rubella HOM05D006681 ORTHO05D008338 1.3e-85 320.5 281 55.9
AUR62001852 Chenopodium quinoa HOM05D006681 ORTHO05D008338 1.3e-85 320.5 281 55.2
Gorai.009G102400 Gossypium raimondii HOM05D006681 ORTHO05D008338 1.7e-85 320.1 279 56.3
FAN21G0481 Fragaria x ananassa HOM05D006681 ORTHO05D008338 2.2e-85 319.7 302 53.6
Mapoly0128s0008 Marchantia polymorpha HOM05D006681 ORTHO05D008338 2.9e-85 319.3 279 56.3
Sed0010670 Sechium edule HOM05D006681 ORTHO05D008338 3.8e-85 318.9 280 56.4
QL01p034239 Quercus lobata HOM05D006681 ORTHO05D008338 5.0e-85 318.5 278 55.4
Gohir.D05G098750 Gossypium hirsutum HOM05D006681 ORTHO05D008338 6.5e-85 318.2 279 55.9
Lalb_Chr03g0026931 Lupinus albus HOM05D006681 ORTHO05D008338 6.5e-85 318.2 277 54.9
PGSC0003DMG400015551 Solanum tuberosum HOM05D006681 ORTHO05D008338 6.5e-85 318.2 281 54.8
CSS0007914 Camellia sinensis var. sinensis HOM05D006681 ORTHO05D008338 8.5e-85 317.8 278 54.7
Oeu040277.1 Olea europaea HOM05D006681 ORTHO05D008338 8.5e-85 317.8 278 56.5
Sopen11g030630 Solanum pennellii HOM05D006681 ORTHO05D008338 8.5e-85 317.8 281 54.8
CSS0025304 Camellia sinensis var. sinensis HOM05D006681 ORTHO05D008338 1.9e-84 316.6 278 54.7
CiPaw.13G101600 Carya illinoinensis HOM05D006681 ORTHO05D008338 1.9e-84 316.6 282 55.0
TPR.G3006 Trifolium pratense HOM05D006681 ORTHO05D008338 1.9e-84 316.6 277 55.6
EL10Ac7g15941 Beta vulgaris HOM05D006681 ORTHO05D008338 2.5e-84 316.2 276 54.3
AT3G46200 Arabidopsis thaliana HOM05D006681 ORTHO05D008338 3.2e-84 315.8 282 55.7
CAN.G1647.1 Capsicum annuum HOM05D006681 ORTHO05D008338 3.2e-84 315.8 282 53.2
Eucgr.J02098 Eucalyptus grandis HOM05D006681 ORTHO05D008338 3.2e-84 315.8 279 55.6
Thhalv10002615m.g Eutrema salsugineum HOM05D006681 ORTHO05D008338 3.2e-84 315.8 279 55.9
Gohir.A05G098700 Gossypium hirsutum HOM05D006681 ORTHO05D008338 4.2e-84 315.5 279 55.9
Thecc.09G329700 Theobroma cacao HOM05D006681 ORTHO05D008338 4.2e-84 315.5 279 56.3
Cfa011429 Carpinus fangiana HOM05D006681 ORTHO05D008338 7.2e-84 314.7 277 55.2
Solyc11g072970.2 Solanum lycopersicum HOM05D006681 ORTHO05D008338 7.2e-84 314.7 281 54.4
AagrBONN_evm.TU.Sc2ySwM_228.1772 Anthoceros agrestis HOM05D006681 ORTHO05D008338 9.4e-84 314.3 278 54.7
COL.COLO4_18427 Corchorus olitorius HOM05D006681 ORTHO05D008338 9.4e-84 314.3 279 54.8
Sabra09G0017800 Salix brachista HOM05D006681 ORTHO05D008338 9.4e-84 314.3 278 54.0
Ciclev10028948m.g Citrus clementina HOM05D006681 ORTHO05D008338 1.2e-83 313.9 277 54.9
Lj3g0002575 Lotus japonicus HOM05D006681 ORTHO05D008338 1.2e-83 313.9 278 55.4
Psat7g220640 Pisum sativum HOM05D006681 ORTHO05D008338 1.2e-83 313.9 277 54.9
Migut.D02146 Erythranthe guttata HOM05D006681 ORTHO05D008338 2.1e-83 313.2 278 54.0
Medtr4g062130 Medicago truncatula HOM05D006681 ORTHO05D008338 2.1e-83 313.2 277 55.6
BcaC01g01926 Brassica carinata HOM05D006681 ORTHO05D008338 4.7e-83 312.0 278 55.8
Duzib170G0311 Durio zibethinus HOM05D006681 ORTHO05D008338 4.7e-83 312.0 278 54.3
CANSAT54G2145 Cannabis sativa HOM05D006681 ORTHO05D008338 7.9e-83 311.2 278 54.0
Peaxi162Scf00411g00068 Petunia axillaris HOM05D006681 ORTHO05D008338 1.0e-82 310.8 278 54.0
C03p70520 Brassica napus HOM05D006681 ORTHO05D008338 1.8e-82 310.1 278 55.4
BolC3t19336H Brassica oleracea HOM05D006681 ORTHO05D008338 1.8e-82 310.1 278 55.4
BraA06t25188Z Brassica rapa HOM05D006681 ORTHO05D008338 5.1e-82 308.5 278 56.1
A06p21000 Brassica napus HOM05D006681 ORTHO05D008338 6.7e-82 308.1 278 56.1
VMungo1127G1059 Vigna mungo HOM05D006681 ORTHO05D008338 6.7e-82 308.1 268 56.3
CsaV3_6G022080 Cucumis sativus L. HOM05D006681 ORTHO05D008338 1.1e-81 307.4 279 53.4
Phvul.011G069100 Phaseolus vulgaris HOM05D006681 ORTHO05D008338 2.6e-81 306.2 277 54.2
MBI14_g35939_MAGBIO Magnolia biondii HOM05D006681 ORTHO05D008338 3.3e-81 305.8 278 55.0
MSTRG.18607 Avicennia marina HOM05D006681 ORTHO05D008338 3.7e-80 302.4 280 52.9
Carub.0003s2829 Capsella rubella HOM05D006681 ORTHO05D008338 3.7e-80 302.4 276 53.6
SalBow3G4078 Salvia bowleyana HOM05D006681 ORTHO05D008338 3.7e-80 302.4 278 52.5
Atru.chr3.3798 Acer truncatum HOM05D006681 ORTHO05D008338 4.8e-80 302.0 278 51.1
Rhsim13G0088300 Rhododendron simsii HOM05D006681 ORTHO05D008338 8.2e-80 301.2 280 51.1
SGA_v2.0_scaffold134G34764 Striga asiatica HOM05D006681 ORTHO05D008338 8.2e-80 301.2 252 57.1
Sp5g15430 Schrenkiella parvula HOM05D006681 ORTHO05D008338 1.1e-79 300.8 278 55.0
PGR119G1802 Punica granatum HOM05D006681 ORTHO05D008338 7.0e-79 298.1 298 51.3
DCAR_006014 Daucus carota HOM05D006681 ORTHO05D008338 1.5e-78 297.0 279 51.6
ClCG02G020630 Citrullus lanatus HOM05D006681 ORTHO05D008338 5.5e-76 288.5 332 46.4
Nitab4.5_0002684g0160 Nicotiana tabacum HOM05D006681 ORTHO05D008338 5.5e-76 288.5 286 51.7
Glyma.12G075000 Glycine max HOM05D006681 ORTHO05D008338 9.4e-76 287.7 276 52.5
FAN25G3219 Fragaria x ananassa HOM05D006681 ORTHO05D008338 3.6e-75 285.8 276 53.3
Aa31LG4G15300 Aethionema arabicum HOM05D006681 ORTHO05D008338 2.8e-72 276.2 353 43.3
Manes.11G136100 Manihot esculenta HOM05D006681 ORTHO05D008338 7.0e-71 271.6 278 51.4
AUR62009646 Chenopodium quinoa HOM05D006681 ORTHO05D008338 1.0e-69 267.7 280 47.9
Thhalv10002633m.g Eutrema salsugineum HOM05D006681 ORTHO05D008338 1.3e-69 267.3 243 54.3
Ah.08g214980 Amaranthus hybridus HOM05D006681 ORTHO05D008338 4.2e-68 262.3 276 48.6
Dinv32860 Davidia involucrata HOM05D006681 ORTHO05D008338 8.8e-66 254.6 219 56.2
CBR_g415 Chara braunii HOM05D006681 ORTHO05D008338 1.2e-65 254.2 338 41.4
Lj1A175T11 Lonicera japonica HOM05D006681 ORTHO05D008338 7.5e-65 251.5 277 46.9
vmacro03125 Vaccinium macrocarpon HOM05D006681 ORTHO05D008338 9.8e-65 251.1 275 47.3
Cpa.g.sc2126.1 Carica papaya HOM05D006681 ORTHO05D008338 1.3e-64 250.8 207 57.0
Nitab4.5_0002684g0190 Nicotiana tabacum HOM05D006681 ORTHO05D008338 4.8e-64 248.8 251 51.4
Lj3g0011020 Lotus japonicus HOM05D006681 ORTHO05D008338 3.1e-63 246.1 218 54.1
Duzib168G1095 Durio zibethinus HOM05D006681 ORTHO05D008338 3.5e-62 242.7 209 56.9
Nitab4.5_0001953g0020 Nicotiana tabacum HOM05D006681 ORTHO05D008338 7.7e-62 241.5 239 49.8
MELO3C013668.2 Cucumis melo HOM05D006681 ORTHO05D008338 3.8e-61 239.2 255 49.8
Hund05017 Selenicereus undatus HOM05D006681 ORTHO05D008338 3.4e-57 226.1 206 55.3
Pp3c11_23047 Physcomitrium patens HOM05D006681 ORTHO05D008338 4.1e-55 219.2 176 60.8
AL1G56400 Arabidopsis lyrata HOM05D006681 ORTHO05D008338 2.9e-53 213.0 178 59.6
ATR0759G055 Amborella trichopoda HOM05D006681 ORTHO05D008338 6.1e-51 205.3 160 60.6
Sc06g0008190 Simmondsia chinensis HOM05D006681 ORTHO05D008338 3.0e-50 203.0 170 54.7
Haze_24007 Corylus avellana HOM05D006681 ORTHO05D008338 2.2e-48 196.8 432 31.9
SEGI_27570 Sequoiadendron giganteum HOM05D006681 ORTHO05D008338 3.7e-48 196.1 191 51.8
Nitab4.5_0001953g0050 Nicotiana tabacum HOM05D006681 ORTHO05D008338 1.2e-43 181.0 276 38.4
PRCOL_00001211 Prasinoderma coloniale HOM05D006681 ORTHO05D008338 3.1e-26 123.2 430 24.7
Sc06g0008200 Simmondsia chinensis HOM05D006681 ORTHO05D008338 4.4e-25 119.4 106 54.7
Glyma.11G145018 Glycine max HOM05D006681 ORTHO05D008338 4.9e-24 115.9 106 53.8
MCO11G760 Micromonas commoda HOM05D006681 ORTHO05D008338 7.1e-23 112.1 235 29.8
Nitab4.5_0000766g0030 Nicotiana tabacum HOM05D006681 ORTHO05D008338 5.1e-21 105.9 143 41.3
CAN.G1289.2 Capsicum annuum HOM05D006681 ORTHO05D008338 8.1e-19 98.6 129 40.3
MD03G1102800 Malus domestica HOM05D006681 ORTHO05D008338 1.6e-14 84.3 71 60.6
CDE08G1356 Ceratophyllum demersum HOM05D006681 ORTHO05D008338 5.3e-10 69.3 62 51.6
Actinidia20468 Actinidia chinensis HOM05D006681 ORTHO05D008338 9.0e-10 68.6 61 55.7
Nitab4.5_0001068g0110 Nicotiana tabacum HOM05D006681 ORTHO05D008338 6.0e-06 55.8 43 62.8


User provided reference genes

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