Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO367G0781 Selaginella moellendorffii HOM05D003862 ORTHO05D004398 2.5e-43 178.3 88 100.0
Mapoly0020s0168 Marchantia polymorpha HOM05D003862 ORTHO05D004398 1.6e-29 132.5 87 70.1
unitig_21.g20465 Utricularia gibba HOM05D003164 ORTHO05D003575 2.7e-29 131.7 86 72.1
Os12g0571200 Oryza sativa ssp. japonica HOM05D003862 ORTHO05D004398 1.0e-28 129.8 87 70.1
EL10Ac5g11591 Beta vulgaris HOM05D003862 ORTHO05D004398 1.8e-28 129.0 87 71.3
Sc05g0009640 Simmondsia chinensis HOM05D003862 ORTHO05D004398 1.8e-28 129.0 87 71.3
unitig_744.g24379 Utricularia gibba HOM05D003862 ORTHO05D004398 2.3e-28 128.6 86 69.8
BcaC02g10413 Brassica carinata HOM05D003862 ORTHO05D004398 3.9e-28 127.9 84 75.0
C04p29160 Brassica napus HOM05D003862 ORTHO05D004398 3.9e-28 127.9 84 75.0
BolC4t24450H Brassica oleracea HOM05D003862 ORTHO05D004398 3.9e-28 127.9 84 75.0
Cc10_g12100 Coffea canephora HOM05D003862 ORTHO05D004398 3.9e-28 127.9 87 70.1
Migut.D00467 Erythranthe guttata HOM05D003862 ORTHO05D004398 3.9e-28 127.9 87 70.1
Pp3c24_15930 Physcomitrium patens HOM05D003862 ORTHO05D004398 3.9e-28 127.9 83 73.5
TAR369G0814 Trochodendron aralioides HOM05D003862 ORTHO05D004398 3.9e-28 127.9 87 69.0
Dinv17003 Davidia involucrata HOM05D003862 ORTHO05D004398 5.1e-28 127.5 87 69.0
Dinv42952 Davidia involucrata HOM05D003862 ORTHO05D004398 5.1e-28 127.5 87 69.0
Dinv43148 Davidia involucrata HOM05D003862 ORTHO05D004398 5.1e-28 127.5 87 69.0
SalBow5G2575 Salvia bowleyana HOM05D003862 ORTHO05D004398 5.1e-28 127.5 87 70.1
Migut.D01636 Erythranthe guttata HOM05D003862 ORTHO05D004398 6.7e-28 127.1 87 70.1
Lsat_1_v5_gn_4_177081 Lactuca sativa HOM05D003862 ORTHO05D004398 6.7e-28 127.1 87 70.1
Lsat_1_v5_gn_5_170681 Lactuca sativa HOM05D003862 ORTHO05D004398 6.7e-28 127.1 87 70.1
vmacro20157 Vaccinium macrocarpon HOM05D003862 ORTHO05D004398 8.7e-28 126.7 87 69.0
HPP92_018126 Vanilla planifolia HOM05D003862 ORTHO05D004398 8.7e-28 126.7 87 70.1
HPP92_018144 Vanilla planifolia HOM05D003862 ORTHO05D004398 8.7e-28 126.7 87 70.1
CSS0028919 Camellia sinensis var. sinensis HOM05D003862 ORTHO05D004398 1.1e-27 126.3 87 69.0
CSS0038231 Camellia sinensis var. sinensis HOM05D003862 ORTHO05D004398 1.1e-27 126.3 87 69.0
Oeu014415.1 Olea europaea HOM05D003862 ORTHO05D004398 1.1e-27 126.3 87 69.0
PSO063G5647 Papaver somniferum HOM05D003862 ORTHO05D004398 1.5e-27 125.9 86 67.4
PSO339G2698 Papaver somniferum HOM05D003862 ORTHO05D004398 1.5e-27 125.9 86 67.4
PSO384G2795 Papaver somniferum HOM05D003862 ORTHO05D004398 1.5e-27 125.9 86 67.4
DCAR_030095 Daucus carota HOM05D003862 ORTHO05D004398 1.9e-27 125.6 87 69.0
Hma1.2p1_0936F.1_g238710 Hydrangea macrophylla HOM05D003862 ORTHO05D004398 1.9e-27 125.6 87 69.0
Hma1.2p1_1513F.1_g287975 Hydrangea macrophylla HOM05D003862 ORTHO05D004398 1.9e-27 125.6 87 69.0
THA.LOC104799442 Tarenaya hassleriana HOM05D003862 ORTHO05D004398 1.9e-27 125.6 84 71.4
THA.LOC104810779 Tarenaya hassleriana HOM05D003862 ORTHO05D004398 1.9e-27 125.6 84 71.4
GSVIVG01024961001 Vitis vinifera HOM05D003862 ORTHO05D004398 1.9e-27 125.6 87 69.0
AagrBONN_evm.TU.Sc2ySwM_368.1516 Anthoceros agrestis HOM05D003862 ORTHO05D004398 2.5e-27 125.2 83 71.1
A03p68180 Brassica napus HOM05D003862 ORTHO05D004398 2.5e-27 125.2 84 73.8
BraA01t02647Z Brassica rapa HOM05D003862 ORTHO05D004398 2.5e-27 125.2 84 73.8
CDE07G2069 Ceratophyllum demersum HOM05D003862 ORTHO05D004398 2.5e-27 125.2 87 69.0
Oeu032100.1 Olea europaea HOM05D003862 ORTHO05D004398 2.5e-27 125.2 87 67.8
BcaC04g22454 Brassica carinata HOM05D003862 ORTHO05D004398 3.3e-27 124.8 84 72.6
A09p15900 Brassica napus HOM05D003862 ORTHO05D004398 3.3e-27 124.8 84 72.6
C09p19140 Brassica napus HOM05D003862 ORTHO05D004398 3.3e-27 124.8 84 72.6
BolC9t54821H Brassica oleracea HOM05D003862 ORTHO05D004398 3.3e-27 124.8 84 72.6
BraA09t37226Z Brassica rapa HOM05D003862 ORTHO05D004398 3.3e-27 124.8 84 72.6
AUR62038108 Chenopodium quinoa HOM05D003862 ORTHO05D004398 3.3e-27 124.8 87 69.0
FvH4_3g36110 Fragaria vesca HOM05D003862 ORTHO05D004398 3.3e-27 124.8 86 68.6
FAN11G3597 Fragaria x ananassa HOM05D003862 ORTHO05D004398 3.3e-27 124.8 86 68.6
FAN16G1598 Fragaria x ananassa HOM05D003862 ORTHO05D004398 3.3e-27 124.8 86 68.6
FAN21G0907 Fragaria x ananassa HOM05D003862 ORTHO05D004398 3.3e-27 124.8 86 68.6
FAN25G1864 Fragaria x ananassa HOM05D003862 ORTHO05D004398 3.3e-27 124.8 86 68.6
Peaxi162Scf00330g00415 Petunia axillaris HOM05D003862 ORTHO05D004398 3.3e-27 124.8 87 67.8
HanXRQChr05g0136091 Helianthus annuus HOM05D003862 ORTHO05D004398 5.6e-27 124.0 86 69.8
CAN.G1195.10 Capsicum annuum HOM05D003862 ORTHO05D004398 7.4e-27 123.6 87 67.8
Cpa.g.sc81.150 Carica papaya HOM05D003862 ORTHO05D004398 7.4e-27 123.6 84 71.4
MBI05_g22042_MAGBIO Magnolia biondii HOM05D003862 ORTHO05D004398 7.4e-27 123.6 87 66.7
Manes.02G133100 Manihot esculenta HOM05D003862 ORTHO05D004398 7.4e-27 123.6 83 68.7
Nitab4.5_0000349g0310 Nicotiana tabacum HOM05D003862 ORTHO05D004398 7.4e-27 123.6 87 67.8
Nitab4.5_0001911g0090 Nicotiana tabacum HOM05D003862 ORTHO05D004398 7.4e-27 123.6 87 67.8
PGSC0003DMG400019201 Solanum tuberosum HOM05D003862 ORTHO05D004398 7.4e-27 123.6 87 67.8
TWI75G0870 Tripterygium wilfordii HOM05D003862 ORTHO05D004398 7.4e-27 123.6 84 71.4
TAR636G2804 Trochodendron aralioides HOM05D003862 ORTHO05D004398 7.4e-27 123.6 87 66.7
BcaB07g31364 Brassica carinata HOM05D003862 ORTHO05D004398 9.6e-27 123.2 84 72.6
Thhalv10002743m.g Eutrema salsugineum HOM05D003862 ORTHO05D004398 9.6e-27 123.2 84 71.4
Gohir.D03G125700 Gossypium hirsutum HOM05D003862 ORTHO05D004398 9.6e-27 123.2 84 70.2
Gohir.D13G233100 Gossypium hirsutum HOM05D003862 ORTHO05D004398 9.6e-27 123.2 84 70.2
Gorai.013G263900 Gossypium raimondii HOM05D003862 ORTHO05D004398 9.6e-27 123.2 84 70.2
Potri.012G039100 Populus trichocarpa HOM05D003862 ORTHO05D004398 9.6e-27 123.2 83 68.7
Sabra12G0027600 Salix brachista HOM05D003862 ORTHO05D004398 9.6e-27 123.2 83 68.7
Sp2g01740 Schrenkiella parvula HOM05D003862 ORTHO05D004398 9.6e-27 123.2 84 71.4
Sed0018689 Sechium edule HOM05D003862 ORTHO05D004398 9.6e-27 123.2 87 67.8
Sed0022625 Sechium edule HOM05D003862 ORTHO05D004398 9.6e-27 123.2 87 67.8
Hund10643 Selenicereus undatus HOM05D003862 ORTHO05D004398 9.6e-27 123.2 87 67.8
Solyc10g086510.2 Solanum lycopersicum HOM05D003862 ORTHO05D004398 9.6e-27 123.2 87 67.8
Sopen10g035890 Solanum pennellii HOM05D003862 ORTHO05D004398 9.6e-27 123.2 87 67.8
AT3G46560 Arabidopsis thaliana HOM05D003862 ORTHO05D004398 1.3e-26 122.9 84 71.4
Carub.0005s1283 Capsella rubella HOM05D003862 ORTHO05D004398 1.3e-26 122.9 84 71.4
AUR62025808 Chenopodium quinoa HOM05D003862 ORTHO05D004398 1.3e-26 122.9 87 67.8
Ciclev10029679m.g Citrus clementina HOM05D003862 ORTHO05D004398 1.3e-26 122.9 84 70.2
Pp3c20_6200 Physcomitrium patens HOM05D003862 ORTHO05D004398 1.3e-26 122.9 83 69.9
Duzib168G1372 Durio zibethinus HOM05D003862 ORTHO05D004398 1.6e-26 122.5 84 70.2
Duzib170G0179 Durio zibethinus HOM05D003862 ORTHO05D004398 1.6e-26 122.5 84 70.2
FAN02G2377 Fragaria x ananassa HOM05D003862 ORTHO05D004398 1.6e-26 122.5 88 67.0
FAN09G4075 Fragaria x ananassa HOM05D003862 ORTHO05D004398 1.6e-26 122.5 88 67.0
Gohir.A13G227500 Gossypium hirsutum HOM05D003862 ORTHO05D004398 1.6e-26 122.5 84 70.2
Ah.02g115390 Amaranthus hybridus HOM05D003862 ORTHO05D004398 2.1e-26 122.1 87 66.7
ClCG10G021140 Citrullus lanatus HOM05D003862 ORTHO05D004398 2.1e-26 122.1 87 66.7
Thhalv10023780m.g Eutrema salsugineum HOM05D003862 ORTHO05D004398 2.1e-26 122.1 84 70.2
Gohir.A03G042066 Gossypium hirsutum HOM05D003862 ORTHO05D004398 2.1e-26 122.1 84 69.0
MD11G1108200 Malus domestica HOM05D003862 ORTHO05D004398 2.1e-26 122.1 87 66.7
Manes.01G173900 Manihot esculenta HOM05D003862 ORTHO05D004398 2.1e-26 122.1 83 67.5
Thecc.09G321500 Theobroma cacao HOM05D003862 ORTHO05D004398 2.1e-26 122.1 84 70.2
TWI36G0288 Tripterygium wilfordii HOM05D003862 ORTHO05D004398 2.1e-26 122.1 84 70.2
Aa31sc23G440 Aethionema arabicum HOM05D003862 ORTHO05D004398 2.8e-26 121.7 84 69.0
Duzib150G0578 Durio zibethinus HOM05D003862 ORTHO05D004398 2.8e-26 121.7 84 70.2
COL.COLO4_18508 Corchorus olitorius HOM05D003862 ORTHO05D004398 3.7e-26 121.3 84 69.0
MELO3C009258.2 Cucumis melo HOM05D003862 ORTHO05D004398 3.7e-26 121.3 87 66.7
CsaV3_3G034900 Cucumis sativus L. HOM05D003862 ORTHO05D004398 3.7e-26 121.3 87 66.7
Gorai.003G131900 Gossypium raimondii HOM05D003862 ORTHO05D004398 3.7e-26 121.3 84 69.0
RcHm_v2.0_Chr5g0064531 Rosa chinensis HOM05D003862 ORTHO05D004398 3.7e-26 121.3 87 66.7
TWI31G1113 Tripterygium wilfordii HOM05D003862 ORTHO05D004398 3.7e-26 121.3 84 70.2
Cfa011504 Carpinus fangiana HOM05D003862 ORTHO05D004398 4.8e-26 120.9 87 65.5
Aa31LG4G15560 Aethionema arabicum HOM05D003862 ORTHO05D004398 6.2e-26 120.6 84 69.0
AL5G25420 Arabidopsis lyrata HOM05D003862 ORTHO05D004398 6.2e-26 120.6 84 70.2
Prupe.6G077400 Prunus persica HOM05D003862 ORTHO05D004398 6.2e-26 120.6 87 66.7
PGR119G1270 Punica granatum HOM05D003862 ORTHO05D004398 6.2e-26 120.6 87 66.7
CARHR155240 Cardamine hirsuta HOM05D003862 ORTHO05D004398 8.2e-26 120.2 84 69.0
Cfa017379 Carpinus fangiana HOM05D003862 ORTHO05D004398 8.2e-26 120.2 87 66.7
CiPaw.14G068400 Carya illinoinensis HOM05D003862 ORTHO05D004398 8.2e-26 120.2 87 65.5
Haze_20791 Corylus avellana HOM05D003862 ORTHO05D004398 8.2e-26 120.2 87 66.7
ECA248G1530 Erigeron canadensis HOM05D003862 ORTHO05D004398 8.2e-26 120.2 86 68.6
FvH4_6g13690 Fragaria vesca HOM05D003862 ORTHO05D004398 8.2e-26 120.2 88 65.9
MD12G1141800 Malus domestica HOM05D003862 ORTHO05D004398 8.2e-26 120.2 84 69.0
Medtr4g063925 Medicago truncatula HOM05D003862 ORTHO05D004398 8.2e-26 120.2 87 66.7
Prupe.6G255300 Prunus persica HOM05D003862 ORTHO05D004398 8.2e-26 120.2 87 65.5
Ca_19161_v3 Cicer arietinum L. HOM05D003862 ORTHO05D004398 1.1e-25 119.8 87 64.4
Glyma.11G139400 Glycine max HOM05D003862 ORTHO05D004398 1.1e-25 119.8 87 65.5
Glyma.12G063000 Glycine max HOM05D003862 ORTHO05D004398 1.1e-25 119.8 87 65.5
Lalb_Chr19g0137831 Lupinus albus HOM05D003862 ORTHO05D004398 1.4e-25 119.4 87 65.5
Nitab4.5_0002018g0010 Nicotiana tabacum HOM05D003862 ORTHO05D004398 1.4e-25 119.4 87 65.5
MD04G1129100 Malus domestica HOM05D003862 ORTHO05D004398 1.8e-25 119.0 87 64.4
RcHm_v2.0_Chr3g0466561 Rosa chinensis HOM05D003862 ORTHO05D004398 1.8e-25 119.0 87 66.7
CiPaw.09G192600 Carya illinoinensis HOM05D003862 ORTHO05D004398 2.4e-25 118.6 87 65.5
Lj3g0018643 Lotus japonicus HOM05D003862 ORTHO05D004398 2.4e-25 118.6 87 64.4
GSVIVG01034172001 Vitis vinifera HOM05D003862 ORTHO05D004398 2.4e-25 118.6 87 66.7
CANSAT54G2947 Cannabis sativa HOM05D003862 ORTHO05D004398 3.1e-25 118.2 83 67.5
Lalb_Chr03g0026631 Lupinus albus HOM05D003862 ORTHO05D004398 3.1e-25 118.2 87 64.4
Phvul.011G064100 Phaseolus vulgaris HOM05D003862 ORTHO05D004398 3.1e-25 118.2 87 63.2
CBR_g46834 Chara braunii HOM05D003862 ORTHO05D004398 4.0e-25 117.9 86 64.0
Nitab4.5_0006455g0030 Nicotiana tabacum HOM05D003862 ORTHO05D004398 4.0e-25 117.9 87 64.4
arahy.Tifrunner.gnm1.ann1.PAA8CG Arachis hypogaea HOM05D003862 ORTHO05D004398 5.3e-25 117.5 83 66.3
arahy.Tifrunner.gnm1.ann1.Q4VW5J Arachis hypogaea HOM05D003862 ORTHO05D004398 5.3e-25 117.5 83 66.3
Carub.0003s2691 Capsella rubella HOM05D003862 ORTHO05D004398 6.9e-25 117.1 84 67.9
PGR102G0842 Punica granatum HOM05D003862 ORTHO05D004398 6.9e-25 117.1 87 64.4
Peaxi162Scf01517g00013 Petunia axillaris HOM05D003862 ORTHO05D004398 1.5e-24 115.9 87 63.2
TPR.G14480 Trifolium pratense HOM05D003862 ORTHO05D004398 1.5e-24 115.9 88 65.9
TPR.G17728 Trifolium pratense HOM05D003862 ORTHO05D004398 1.5e-24 115.9 80 71.2
Hund04959 Selenicereus undatus HOM05D003862 ORTHO05D004398 1.7e-23 112.5 87 60.9
Rhsim05G0192800 Rhododendron simsii HOM05D003862 ORTHO05D004398 2.9e-23 111.7 110 53.6
Aqoxy4G02928 Aquilegia oxysepala HOM05D003862 ORTHO05D004398 3.8e-23 111.3 83 61.4
Cfa016018 Carpinus fangiana HOM05D000273 ORTHO05D004398 3.8e-23 111.3 87 62.1
Actinidia11257 Actinidia chinensis HOM05D003862 ORTHO05D004398 6.5e-23 110.5 76 71.1
Actinidia05313 Actinidia chinensis HOM05D003862 ORTHO05D004398 8.4e-23 110.2 77 67.5
MD03G1093400 Malus domestica HOM05D003862 ORTHO05D004398 8.4e-23 110.2 74 68.9
MCO12G250 Micromonas commoda HOM05D003862 ORTHO05D004398 1.4e-22 109.4 79 60.8
ATR0559G041 Amborella trichopoda HOM05D003862 ORTHO05D004398 3.2e-22 108.2 74 66.2
Phvul.L001624 Phaseolus vulgaris HOM05D003862 ORTHO05D004398 3.5e-21 104.8 80 60.0
vmacro08654 Vaccinium macrocarpon HOM05D003862 ORTHO05D004398 3.5e-21 104.8 63 76.2
VMungo1127G0240 Vigna mungo HOM05D003862 ORTHO05D004398 3.5e-21 104.8 74 63.5
HanXRQChr01g0009491 Helianthus annuus HOM05D003862 ORTHO05D004398 4.6e-21 104.4 79 62.0
Dinv37171 Davidia involucrata HOM05D003862 ORTHO05D004398 1.0e-20 103.2 62 77.4
Lj3g0015625 Lotus japonicus HOM05D003862 ORTHO05D004398 1.8e-20 102.4 86 54.7
Glyma.03G082300 Glycine max HOM05D003862 ORTHO05D004398 2.3e-20 102.1 80 58.8
Sc20g0004910 Simmondsia chinensis HOM05D003862 ORTHO05D004398 2.3e-20 102.1 63 76.2
arahy.Tifrunner.gnm1.ann1.817FQF Arachis hypogaea HOM05D003862 ORTHO05D004398 3.9e-20 101.3 78 60.3
arahy.Tifrunner.gnm1.ann1.JG2TRE Arachis hypogaea HOM05D003862 ORTHO05D004398 3.9e-20 101.3 78 60.3
arahy.Tifrunner.gnm1.ann1.L1N949 Arachis hypogaea HOM05D003862 ORTHO05D004398 5.1e-20 100.9 78 60.3
Nn2g14532 Nelumbo nucifera HOM05D003862 ORTHO05D004398 5.1e-20 100.9 63 74.6
Eucgr.A01265 Eucalyptus grandis HOM05D003862 ORTHO05D004398 8.7e-20 100.1 79 62.0
Haze_24096 Corylus avellana HOM05D003862 ORTHO05D004398 1.1e-19 99.8 62 72.6
arahy.Tifrunner.gnm1.ann1.GD7L84 Arachis hypogaea HOM05D003862 ORTHO05D004398 1.5e-19 99.4 78 59.0
CAN.G326.7 Capsicum annuum HOM05D003862 ORTHO05D004398 2.5e-19 98.6 63 73.0
QL01p031927 Quercus lobata HOM05D003862 ORTHO05D004398 2.5e-19 98.6 62 71.0
FAN27G3302 Fragaria x ananassa HOM05D003862 ORTHO05D004398 3.3e-19 98.2 88 56.8
unitig_6.g29269 Utricularia gibba HOM05D003862 ORTHO05D004398 5.7e-19 97.4 78 59.0
unitig_747.g21430 Utricularia gibba HOM05D003862 ORTHO05D004398 5.7e-19 97.4 78 59.0
QL07p048307 Quercus lobata HOM05D003862 ORTHO05D004398 7.4e-19 97.1 61 73.8
SalBow2G1777 Salvia bowleyana HOM05D003862 ORTHO05D004398 7.4e-19 97.1 81 55.6
TPR.G5603 Trifolium pratense HOM05D003862 ORTHO05D004398 1.1e-17 93.2 86 47.7
PGR004G0102 Punica granatum HOM05D003862 ORTHO05D004398 1.4e-17 92.8 85 52.9
Solyc08g048070.1 Solanum lycopersicum HOM05D003862 ORTHO05D004398 5.3e-17 90.9 67 64.2
FAN14G4115 Fragaria x ananassa HOM05D003862 ORTHO05D004398 2.0e-16 89.0 88 55.7
Psat7g239120 Pisum sativum HOM05D003862 ORTHO05D004398 5.9e-16 87.4 86 44.2
Peaxi162Scf00165g00129 Petunia axillaris HOM05D003862 ORTHO05D004398 1.0e-15 86.7 79 55.7
PRCOL_00005138 Prasinoderma coloniale HOM05D003862 ORTHO05D004398 6.5e-15 84.0 67 55.2
Cre01.g033400 Chlamydomonas reinhardtii HOM05D003862 ORTHO05D004398 7.2e-14 80.5 76 48.7
MBI14_g20103_MAGBIO Magnolia biondii HOM05D003862 ORTHO05D004398 1.0e-12 76.6 87 49.4
Os05g0111100 Oryza sativa ssp. japonica HOM05D003862 ORTHO05D004398 1.1e-09 66.6 70 44.3
Medtr4g021715 Medicago truncatula HOM05D003862 ORTHO05D004398 8.5e-07 57.0 86 37.2


User provided reference genes

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