Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO367G0761 Selaginella moellendorffii HOM05D004652 ORTHO05D005634 3.6e-219 764.6 379 100.0
Mapoly0032s0004 Marchantia polymorpha HOM05D004652 ORTHO05D005634 4.2e-111 405.6 310 64.8
ATR0724G029 Amborella trichopoda HOM05D004652 ORTHO05D005634 2.2e-107 393.3 307 62.5
Pp3c4_13980 Physcomitrium patens HOM05D004652 ORTHO05D005634 3.7e-107 392.5 304 61.5
Dinv30009 Davidia involucrata HOM05D004652 ORTHO05D005634 1.8e-106 390.2 303 60.4
Os03g0109700 Oryza sativa ssp. japonica HOM05D004652 ORTHO05D005634 7.6e-105 384.8 304 57.9
Lalb_Chr05g0213341 Lupinus albus HOM05D004652 ORTHO05D005634 1.0e-104 384.4 303 59.7
Nn5g30355 Nelumbo nucifera HOM05D004652 ORTHO05D005634 3.8e-104 382.5 303 59.4
Phvul.002G017100 Phaseolus vulgaris HOM05D004652 ORTHO05D005634 8.5e-104 381.3 303 59.1
arahy.Tifrunner.gnm1.ann1.8Y90C0 Arachis hypogaea HOM05D004652 ORTHO05D005634 1.4e-103 380.6 303 58.4
Glyma.01G188100 Glycine max HOM05D004652 ORTHO05D005634 1.4e-103 380.6 303 59.1
PSO675G7477 Papaver somniferum HOM05D004652 ORTHO05D005634 1.9e-103 380.2 303 58.4
arahy.Tifrunner.gnm1.ann1.EFTP1R Arachis hypogaea HOM05D004652 ORTHO05D005634 3.2e-103 379.4 303 58.4
Lj7A73G20 Lonicera japonica HOM05D004652 ORTHO05D005634 3.2e-103 379.4 303 59.1
AUR62013234 Chenopodium quinoa HOM05D004652 ORTHO05D005634 1.2e-102 377.5 305 60.7
MELO3C020851.2 Cucumis melo HOM05D004652 ORTHO05D005634 1.2e-102 377.5 303 59.7
Potri.007G045900 Populus trichocarpa HOM05D004652 ORTHO05D005634 1.2e-102 377.5 305 59.3
MSTRG.23735 Avicennia marina HOM05D004652 ORTHO05D005634 2.7e-102 376.3 303 58.1
TWI31G1310 Tripterygium wilfordii HOM05D004652 ORTHO05D005634 3.6e-102 375.9 303 58.1
CiPaw.01G015800 Carya illinoinensis HOM05D004652 ORTHO05D005634 4.6e-102 375.6 303 57.8
Thecc.02G103600 Theobroma cacao HOM05D004652 ORTHO05D005634 4.6e-102 375.6 303 57.8
TPR.G19549 Trifolium pratense HOM05D004652 ORTHO05D005634 4.6e-102 375.6 306 57.8
CDE02G2369 Ceratophyllum demersum HOM05D004652 ORTHO05D005634 6.1e-102 375.2 304 58.9
Glyma.11G054000 Glycine max HOM05D004652 ORTHO05D005634 7.9e-102 374.8 303 58.1
CsaV3_2G016420 Cucumis sativus L. HOM05D004652 ORTHO05D005634 1.0e-101 374.4 303 59.1
Lj2g0023089 Lotus japonicus HOM05D004652 ORTHO05D005634 1.0e-101 374.4 303 57.8
CiPaw.01G015500 Carya illinoinensis HOM05D004652 ORTHO05D005634 2.3e-101 373.2 303 57.4
VMungo1215G2858 Vigna mungo HOM05D004652 ORTHO05D005634 2.3e-101 373.2 303 57.1
Atru.chr5.2643 Acer truncatum HOM05D004652 ORTHO05D005634 3.0e-101 372.9 303 57.1
Atru.chr5.2649 Acer truncatum HOM05D004652 ORTHO05D005634 3.0e-101 372.9 303 57.1
CSS0025726 Camellia sinensis var. sinensis HOM05D004652 ORTHO05D005634 3.0e-101 372.9 303 57.4
Manes.13G121100 Manihot esculenta HOM05D004652 ORTHO05D005634 3.0e-101 372.9 307 57.7
GSVIVG01031712001 Vitis vinifera HOM05D004652 ORTHO05D005634 3.9e-101 372.5 303 58.4
Aqoxy6G01262 Aquilegia oxysepala HOM05D004652 ORTHO05D005634 6.7e-101 371.7 300 58.7
Hma1.2p1_0670F.1_g200440 Hydrangea macrophylla HOM05D004652 ORTHO05D005634 6.7e-101 371.7 304 57.9
Duzib132G1249 Durio zibethinus HOM05D004652 ORTHO05D005634 8.8e-101 371.3 306 57.5
PGR102G1991 Punica granatum HOM05D004652 ORTHO05D005634 8.8e-101 371.3 303 57.8
RcHm_v2.0_Chr2g0106191 Rosa chinensis HOM05D004652 ORTHO05D005634 8.8e-101 371.3 303 57.4
Psat3g034240 Pisum sativum HOM05D004652 ORTHO05D005634 1.1e-100 370.9 307 56.7
Actinidia36476 Actinidia chinensis HOM05D004652 ORTHO05D005634 2.5e-100 369.8 303 57.4
QL06p040720 Quercus lobata HOM05D004652 ORTHO05D005634 2.5e-100 369.8 303 56.8
Ciclev10030127m.g Citrus clementina HOM05D004652 ORTHO05D005634 4.3e-100 369.0 303 57.4
Migut.H00415 Erythranthe guttata HOM05D004652 ORTHO05D005634 4.3e-100 369.0 303 55.1
FvH4_1g16330 Fragaria vesca HOM05D004652 ORTHO05D005634 4.3e-100 369.0 303 57.1
Gorai.013G045700 Gossypium raimondii HOM05D004652 ORTHO05D005634 4.3e-100 369.0 306 57.8
GSVIVG01022087001 Vitis vinifera HOM05D004652 ORTHO05D005634 4.3e-100 369.0 306 56.9
Gohir.A13G042200 Gossypium hirsutum HOM05D004652 ORTHO05D005634 7.4e-100 368.2 306 57.8
FAN23G0595 Fragaria x ananassa HOM05D004652 ORTHO05D005634 1.3e-99 367.5 303 56.4
FAN19G0057 Fragaria x ananassa HOM05D004652 ORTHO05D005634 1.7e-99 367.1 303 56.8
Medtr7g104350 Medicago truncatula HOM05D004652 ORTHO05D005634 2.2e-99 366.7 303 57.1
Sed0013827 Sechium edule HOM05D004652 ORTHO05D005634 2.2e-99 366.7 304 58.9
Solyc02g093170.4 Solanum lycopersicum HOM05D004652 ORTHO05D005634 2.2e-99 366.7 303 56.1
ECA232G0198 Erigeron canadensis HOM05D004652 ORTHO05D005634 2.8e-99 366.3 303 56.1
Nitab4.5_0001221g0030 Nicotiana tabacum HOM05D004652 ORTHO05D005634 2.8e-99 366.3 303 56.1
PGSC0003DMG400004028 Solanum tuberosum HOM05D004652 ORTHO05D005634 2.8e-99 366.3 303 56.1
Peaxi162Scf00549g00023 Petunia axillaris HOM05D004652 ORTHO05D005634 4.8e-99 365.5 306 56.5
Sopen02g037740 Solanum pennellii HOM05D004652 ORTHO05D005634 4.8e-99 365.5 303 55.8
HPP92_024094 Vanilla planifolia HOM05D004652 ORTHO05D005634 4.8e-99 365.5 305 58.7
Zm00001eb404220 Zea mays HOM05D004652 ORTHO05D005634 4.8e-99 365.5 292 58.6
Duzib147G0331 Durio zibethinus HOM05D004652 ORTHO05D005634 6.3e-99 365.2 303 57.4
Gorai.007G215700 Gossypium raimondii HOM05D004652 ORTHO05D005634 1.1e-98 364.4 303 57.4
CANSAT25G2702 Cannabis sativa HOM05D004652 ORTHO05D005634 1.4e-98 364.0 303 56.4
Thecc.01G060000 Theobroma cacao HOM05D004652 ORTHO05D005634 1.4e-98 364.0 301 57.1
Cpa.g.sc55.119 Carica papaya HOM05D004652 ORTHO05D005634 1.8e-98 363.6 307 56.7
DCAR_010876 Daucus carota HOM05D004652 ORTHO05D005634 1.8e-98 363.6 303 56.1
HanXRQChr15g0490761 Helianthus annuus HOM05D004652 ORTHO05D005634 1.8e-98 363.6 303 56.4
Gohir.A11G195100 Gossypium hirsutum HOM05D004652 ORTHO05D005634 3.1e-98 362.8 301 57.8
Cc07_g06170 Coffea canephora HOM05D004652 ORTHO05D005634 6.9e-98 361.7 306 54.6
Sc07g0000730 Simmondsia chinensis HOM05D004652 ORTHO05D005634 6.9e-98 361.7 304 56.9
Potri.009G099600 Populus trichocarpa HOM05D004652 ORTHO05D005634 9.1e-98 361.3 303 55.8
THA.LOC104807263 Tarenaya hassleriana HOM05D004652 ORTHO05D005634 9.1e-98 361.3 303 58.1
Pp3c13_18360 Physcomitrium patens HOM05D004652 ORTHO05D005634 1.2e-97 360.9 304 57.2
Sabra09G0075900 Salix brachista HOM05D004652 ORTHO05D005634 1.2e-97 360.9 303 56.1
CSS0033708 Camellia sinensis var. sinensis HOM05D004652 ORTHO05D005634 1.5e-97 360.5 293 57.0
unitig_736.g22389 Utricularia gibba HOM05D004652 ORTHO05D005634 4.5e-97 359.0 304 55.9
Nitab4.5_0002765g0060 Nicotiana tabacum HOM05D004652 ORTHO05D005634 7.7e-97 358.2 303 54.5
TWI09G0879 Tripterygium wilfordii HOM05D004652 ORTHO05D005634 7.7e-97 358.2 303 56.4
Lsat_1_v5_gn_4_165120 Lactuca sativa HOM05D004652 ORTHO05D005634 1.3e-96 357.5 303 54.5
EL10Ac9g22324 Beta vulgaris HOM05D004652 ORTHO05D005634 1.7e-96 357.1 347 51.3
MD02G1175800 Malus domestica HOM05D004652 ORTHO05D005634 1.7e-96 357.1 303 56.8
Sabra07G0041100 Salix brachista HOM05D004652 ORTHO05D005634 1.7e-96 357.1 337 52.8
Eucgr.I01131 Eucalyptus grandis HOM05D004652 ORTHO05D005634 2.9e-96 356.3 306 55.2
Haze_15373 Corylus avellana HOM05D004652 ORTHO05D005634 6.5e-96 355.1 333 50.8
FAN28G0632 Fragaria x ananassa HOM05D004652 ORTHO05D005634 1.1e-95 354.4 307 54.7
Eucgr.H01690 Eucalyptus grandis HOM05D004652 ORTHO05D005634 1.4e-95 354.0 306 55.9
Ciclev10025986m.g Citrus clementina HOM05D004652 ORTHO05D005634 2.5e-95 353.2 303 54.5
AUR62010252 Chenopodium quinoa HOM05D004652 ORTHO05D005634 5.5e-95 352.1 283 62.2
Sp7g31800 Schrenkiella parvula HOM05D004652 ORTHO05D005634 7.2e-95 351.7 303 56.4
Actinidia12037 Actinidia chinensis HOM05D004652 ORTHO05D005634 6.1e-94 348.6 332 52.1
AagrBONN_evm.TU.Sc2ySwM_362.2895 Anthoceros agrestis HOM05D004652 ORTHO05D005634 6.1e-94 348.6 312 56.4
Thhalv10025679m.g Eutrema salsugineum HOM05D004652 ORTHO05D005634 6.1e-94 348.6 303 55.8
Aa31LG2G16510 Aethionema arabicum HOM05D002471 ORTHO05D003712 7.9e-94 348.2 306 54.9
CARHR242200 Cardamine hirsuta HOM05D004652 ORTHO05D005634 7.9e-94 348.2 303 55.8
Carub.0007s0633 Capsella rubella HOM05D004652 ORTHO05D005634 1.0e-93 347.8 303 55.1
AL7G17310 Arabidopsis lyrata HOM05D004652 ORTHO05D005634 1.4e-93 347.4 303 55.8
AT4G34090 Arabidopsis thaliana HOM05D004652 ORTHO05D005634 3.9e-93 345.9 303 55.1
SGA_v2.0_scaffold143G35809 Striga asiatica HOM05D004652 ORTHO05D005634 8.8e-93 344.7 279 57.3
Gohir.D11G201200 Gossypium hirsutum HOM05D004652 ORTHO05D005634 2.0e-92 343.6 281 59.1
BcaNung03359 Brassica carinata HOM05D004652 ORTHO05D005634 3.3e-92 342.8 303 54.8
Ah.01g017900 Amaranthus hybridus HOM05D004652 ORTHO05D005634 2.8e-91 339.7 278 56.1
Oeu049898.1 Olea europaea HOM05D004652 ORTHO05D005634 1.4e-90 337.4 262 58.8
PSO541G5706 Papaver somniferum HOM05D004652 ORTHO05D005634 3.1e-90 336.3 303 53.5
Hund13540 Selenicereus undatus HOM05D004652 ORTHO05D005634 4.1e-90 335.9 304 52.3
SGA_v2.0_scaffold34G13618 Striga asiatica HOM05D004652 ORTHO05D005634 9.1e-90 334.7 286 56.6
THA.LOC104807591 Tarenaya hassleriana HOM05D004652 ORTHO05D005634 2.0e-89 333.6 303 53.5
vmacro05311 Vaccinium macrocarpon HOM05D004652 ORTHO05D005634 7.7e-89 331.6 303 53.5
AUR62001905 Chenopodium quinoa HOM05D004652 ORTHO05D005634 6.5e-88 328.6 306 51.3
CBR_g34458 Chara braunii HOM05D004652 ORTHO05D005634 7.2e-87 325.1 334 48.5
AT2G23370 Arabidopsis thaliana HOM05D004652 ORTHO05D005634 2.7e-86 323.2 303 50.2
Atru.chr3.293 Acer truncatum HOM05D004652 ORTHO05D005634 6.1e-86 322.0 307 52.1
AUR62003906 Chenopodium quinoa HOM05D004652 ORTHO05D005634 1.4e-85 320.9 284 53.5
Rhsim10G0114700 Rhododendron simsii HOM05D004652 ORTHO05D005634 1.1e-84 317.8 262 56.1
BcaC07g40988 Brassica carinata HOM05D004652 ORTHO05D005634 4.8e-83 312.4 303 48.8
C08p39900 Brassica napus HOM05D004652 ORTHO05D005634 4.8e-83 312.4 303 48.8
BolC8t51563H Brassica oleracea HOM05D004652 ORTHO05D005634 6.3e-83 312.0 303 48.8
CARHR293000 Cardamine hirsuta HOM05D004652 ORTHO05D005634 6.3e-83 312.0 303 49.2
AL4G13280 Arabidopsis lyrata HOM05D004652 ORTHO05D005634 1.8e-82 310.5 303 49.2
A09p56940 Brassica napus HOM05D004652 ORTHO05D005634 1.8e-82 310.5 303 48.5
Carub.0004s0257 Capsella rubella HOM05D004652 ORTHO05D005634 2.4e-82 310.1 303 48.5
BraA09t41086Z Brassica rapa HOM05D004652 ORTHO05D005634 2.0e-81 307.0 303 48.2
Prupe.6G231900 Prunus persica HOM05D004652 ORTHO05D005634 1.3e-80 304.3 249 57.0
Sp4g02380 Schrenkiella parvula HOM05D004652 ORTHO05D005634 2.2e-80 303.5 303 48.2
Hund00119 Selenicereus undatus HOM05D004652 ORTHO05D005634 3.6e-78 296.2 307 50.8
BraA03t15329Z Brassica rapa HOM05D004652 ORTHO05D005634 2.0e-76 290.4 306 49.7
BolC7t46455H Brassica oleracea HOM05D004652 ORTHO05D005634 5.7e-76 288.9 306 49.7
COL.COLO4_24563 Corchorus olitorius HOM05D004652 ORTHO05D005634 3.1e-74 283.1 248 57.3
Aa31LG7G13600 Aethionema arabicum HOM05D004652 ORTHO05D005634 5.3e-74 282.3 344 43.3
C07p60150 Brassica napus HOM05D004652 ORTHO05D005634 1.5e-71 274.2 333 45.6
ClCG02G012270 Citrullus lanatus HOM05D004652 ORTHO05D005634 2.5e-71 273.5 226 56.2
A03p62590 Brassica napus HOM05D004652 ORTHO05D005634 4.2e-71 272.7 333 45.0
Cpa.g.sc200.27 Carica papaya HOM05D004652 ORTHO05D005634 3.6e-70 269.6 322 47.8
Thhalv10000243m.g Eutrema salsugineum HOM05D004652 ORTHO05D005634 4.7e-70 269.2 314 44.6
EL10Ac6g15724 Beta vulgaris HOM05D004652 ORTHO05D005634 4.0e-69 266.2 235 54.9
Ah.02g125990 Amaranthus hybridus HOM05D004652 ORTHO05D005634 2.7e-65 253.4 281 45.6
Ca_08994_v3 Cicer arietinum L. HOM05D004652 ORTHO05D005634 3.6e-62 243.0 306 43.1
SEGI_25477 Sequoiadendron giganteum HOM05D004652 ORTHO05D005634 8.0e-62 241.9 160 68.8
SEGI_26044 Sequoiadendron giganteum HOM05D004652 ORTHO05D005634 8.0e-62 241.9 160 68.8
COL.COLO4_32629 Corchorus olitorius HOM05D004652 ORTHO05D005634 4.4e-60 236.1 303 41.6
FAN26G0096 Fragaria x ananassa HOM05D004652 ORTHO05D005634 1.6e-57 227.6 159 66.7
Gohir.D13G040700 Gossypium hirsutum HOM05D004652 ORTHO05D005634 1.7e-56 224.2 200 55.0
Oeu004436.1 Olea europaea HOM05D004652 ORTHO05D005634 2.9e-56 223.4 315 42.9
Eucgr.I01132 Eucalyptus grandis HOM05D004652 ORTHO05D005634 3.0e-53 213.4 196 51.5
Cre13.g563150 Chlamydomonas reinhardtii HOM05D004652 ORTHO05D005634 1.3e-48 198.0 326 36.5
Aqoxy2G01254 Aquilegia oxysepala HOM05D004652 ORTHO05D005634 2.8e-46 190.3 135 65.2
TAR381G1258 Trochodendron aralioides HOM05D004652 ORTHO05D005634 7.0e-42 175.6 176 48.3
MCO15G669 Micromonas commoda HOM05D004652 ORTHO05D005634 1.3e-40 171.4 307 36.8
TAR381G1342 Trochodendron aralioides HOM05D004652 ORTHO05D005634 4.0e-37 159.8 108 65.7
PRCOL_00001748 Prasinoderma coloniale HOM05D004652 ORTHO05D005634 5.8e-36 156.0 316 36.1
Aqoxy4G02413 Aquilegia oxysepala HOM05D004652 ORTHO05D005634 5.4e-34 149.4 112 61.6
ECA248G0229 Erigeron canadensis HOM05D004652 ORTHO05D005634 4.6e-33 146.4 107 60.7
MCO09G010 Micromonas commoda HOM05D004652 ORTHO05D005634 4.0e-29 133.3 366 29.8
Potri.001G304401 Populus trichocarpa HOM05D004652 ORTHO05D005634 8.1e-22 109.0 128 44.5
TAR381G1519 Trochodendron aralioides HOM05D004652 ORTHO05D005634 6.9e-21 105.9 160 38.1
Lalb_Chr09g0323281 Lupinus albus HOM05D004652 ORTHO05D005634 3.0e-16 90.5 169 34.3
Sabra07G0040900 Salix brachista HOM05D015619 ORTHO05D009044 1.9e-15 87.8 78 53.8
CDE01G0594 Ceratophyllum demersum HOM05D000934 ORTHO05D000746 5.3e-13 79.7 105 41.0
Cc00_g07740 Coffea canephora HOM05D004652 ORTHO05D005634 3.9e-08 63.5 68 41.2


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