Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO367G0732 Selaginella moellendorffii HOM05D006134 ORTHO05D007671 7.9e-79 297.0 143 100.0
Mapoly0028s0104 Marchantia polymorpha HOM05D006134 ORTHO05D007671 2.6e-53 212.2 137 70.8
Pp3c14_10610 Physcomitrium patens HOM05D006134 ORTHO05D007671 1.1e-51 206.8 146 66.4
Pp3c14_10611 Physcomitrium patens HOM05D006134 ORTHO05D007671 1.1e-51 206.8 146 66.4
Nn6g31911 Nelumbo nucifera HOM05D006134 ORTHO05D007671 7.2e-48 194.1 124 71.0
CDE04G1640 Ceratophyllum demersum HOM05D006134 ORTHO05D007671 1.2e-47 193.4 124 69.4
TAR376G1190 Trochodendron aralioides HOM05D006134 ORTHO05D007671 1.6e-47 193.0 124 71.0
DCAR_025267 Daucus carota HOM05D006444 ORTHO05D007748 1.4e-46 189.9 124 69.4
Lalb_Chr10g0093471 Lupinus albus HOM05D006134 ORTHO05D007671 1.8e-46 189.5 124 71.0
Lalb_Chr10g0093491 Lupinus albus HOM05D006134 ORTHO05D007671 1.8e-46 189.5 124 71.0
Manes.11G097800 Manihot esculenta HOM05D006134 ORTHO05D007671 3.0e-46 188.7 124 70.2
Dinv21074 Davidia involucrata HOM05D006134 ORTHO05D007671 4.0e-46 188.3 124 70.2
arahy.Tifrunner.gnm1.ann1.PD8D7M Arachis hypogaea HOM05D006134 ORTHO05D007671 6.8e-46 187.6 124 70.2
Ciclev10029589m.g Citrus clementina HOM05D006134 ORTHO05D007671 8.8e-46 187.2 124 68.5
AUR62021421 Chenopodium quinoa HOM05D006134 ORTHO05D007671 1.2e-45 186.8 124 67.7
Glyma.11G156931 Glycine max HOM05D006134 ORTHO05D007671 1.2e-45 186.8 124 69.4
Psat5g110600 Pisum sativum HOM05D006134 ORTHO05D007671 1.2e-45 186.8 123 70.7
VMungo1080G1627 Vigna mungo HOM05D006134 ORTHO05D007671 1.2e-45 186.8 123 70.7
CANSAT80G1040 Cannabis sativa HOM05D006134 ORTHO05D007671 1.5e-45 186.4 124 69.4
Lj6g0003235 Lotus japonicus HOM05D006134 ORTHO05D007671 1.5e-45 186.4 123 71.5
Ah.01g023220 Amaranthus hybridus HOM05D006134 ORTHO05D007671 2.0e-45 186.0 124 66.9
CSS0027024 Camellia sinensis var. sinensis HOM05D006134 ORTHO05D007671 2.6e-45 185.7 124 68.5
Cc02_g30030 Coffea canephora HOM05D006134 ORTHO05D007671 2.6e-45 185.7 124 71.0
EL10Ac9g21342 Beta vulgaris HOM05D006134 ORTHO05D007671 3.4e-45 185.3 124 67.7
Lsat_1_v5_gn_1_25060 Lactuca sativa HOM05D006134 ORTHO05D007671 3.4e-45 185.3 123 68.3
Atru.chr9.1880 Acer truncatum HOM05D006134 ORTHO05D007671 4.4e-45 184.9 124 66.9
QL11p052022 Quercus lobata HOM05D006134 ORTHO05D007671 4.4e-45 184.9 117 70.9
QL11p052248 Quercus lobata HOM05D006134 ORTHO05D007671 4.4e-45 184.9 117 70.9
Sed0025018 Sechium edule HOM05D006134 ORTHO05D007671 4.4e-45 184.9 124 67.7
CsaV3_2G009990 Cucumis sativus L. HOM05D006134 ORTHO05D007671 5.7e-45 184.5 124 67.7
ATR0730G227 Amborella trichopoda HOM05D006134 ORTHO05D007671 7.5e-45 184.1 123 67.5
Aqoxy5G01105 Aquilegia oxysepala HOM05D006134 ORTHO05D007671 7.5e-45 184.1 124 70.2
CSS0024749 Camellia sinensis var. sinensis HOM05D006134 ORTHO05D007671 7.5e-45 184.1 124 68.5
CSS0037732 Camellia sinensis var. sinensis HOM05D006134 ORTHO05D007671 7.5e-45 184.1 124 68.5
Cpa.g.sc182.12 Carica papaya HOM05D006134 ORTHO05D007671 7.5e-45 184.1 124 67.7
arahy.Tifrunner.gnm1.ann1.A6PCA1 Arachis hypogaea HOM05D006134 ORTHO05D007671 9.8e-45 183.7 136 64.7
CDE02G2427 Ceratophyllum demersum HOM05D006134 ORTHO05D007671 1.3e-44 183.3 124 66.1
Haze_00699 Corylus avellana HOM05D006134 ORTHO05D007671 1.3e-44 183.3 124 68.5
Medtr3g082190 Medicago truncatula HOM05D006134 ORTHO05D007671 1.3e-44 183.3 123 69.1
TAR628G0583 Trochodendron aralioides HOM05D006134 ORTHO05D007671 1.3e-44 183.3 124 66.9
Phvul.005G034200 Phaseolus vulgaris HOM05D006134 ORTHO05D007671 1.7e-44 183.0 123 69.9
HanXRQChr12g0383651 Helianthus annuus HOM05D006134 ORTHO05D007671 2.2e-44 182.6 124 66.1
Peaxi162Scf00359g00813 Petunia axillaris HOM05D006134 ORTHO05D007671 2.2e-44 182.6 124 67.7
CiPaw.10G137600 Carya illinoinensis HOM05D006134 ORTHO05D007671 3.7e-44 181.8 124 66.9
ECA247G3382 Erigeron canadensis HOM05D006134 ORTHO05D007671 3.7e-44 181.8 124 65.3
RcHm_v2.0_Chr7g0212881 Rosa chinensis HOM05D006134 ORTHO05D007671 3.7e-44 181.8 124 69.4
GSVIVG01023976001 Vitis vinifera HOM05D006134 ORTHO05D007671 3.7e-44 181.8 124 68.5
CBR_g12196 Chara braunii HOM05D006134 ORTHO05D007671 4.8e-44 181.4 122 68.0
Ca_17958_v3 Cicer arietinum L. HOM05D006134 ORTHO05D007671 4.8e-44 181.4 124 67.7
MELO3C008634.2 Cucumis melo HOM05D006134 ORTHO05D007671 4.8e-44 181.4 124 66.9
Nitab4.5_0000101g0190 Nicotiana tabacum HOM05D006134 ORTHO05D007671 1.1e-43 180.3 124 66.1
FAN04G0013 Fragaria x ananassa HOM05D006134 ORTHO05D007671 2.4e-43 179.1 124 68.5
FAN08G0898 Fragaria x ananassa HOM05D006134 ORTHO05D007671 2.4e-43 179.1 124 68.5
PGSC0003DMG400020551 Solanum tuberosum HOM05D006134 ORTHO05D007671 3.1e-43 178.7 124 66.1
CAN.G181.11 Capsicum annuum HOM05D006134 ORTHO05D007671 4.1e-43 178.3 124 66.1
Solyc06g007480.3 Solanum lycopersicum HOM05D006134 ORTHO05D007671 4.1e-43 178.3 124 66.1
AUR62010905 Chenopodium quinoa HOM05D006134 ORTHO05D007671 5.4e-43 177.9 136 61.8
SGA_v2.0_scaffold207G41895 Striga asiatica HOM05D006134 ORTHO05D007671 7.0e-43 177.6 124 67.7
FvH4_5g23580 Fragaria vesca HOM05D006134 ORTHO05D007671 9.1e-43 177.2 124 67.7
FAN18G0426 Fragaria x ananassa HOM05D006134 ORTHO05D007671 9.1e-43 177.2 124 67.7
FAN18G3769 Fragaria x ananassa HOM05D006134 ORTHO05D007671 9.1e-43 177.2 124 67.7
Hund14365 Selenicereus undatus HOM05D006134 ORTHO05D007671 9.1e-43 177.2 124 64.5
TWI79G0531 Tripterygium wilfordii HOM05D006134 ORTHO05D007671 1.2e-42 176.8 124 65.3
Sopen06g002390 Solanum pennellii HOM05D006134 ORTHO05D007671 1.6e-42 176.4 124 65.3
PSO210G5022 Papaver somniferum HOM05D006134 ORTHO05D007671 2.7e-42 175.6 124 65.3
PGR042G1126 Punica granatum HOM05D006134 ORTHO05D007671 3.5e-42 175.3 124 67.7
MD12G1003500 Malus domestica HOM05D006134 ORTHO05D007671 5.9e-42 174.5 103 75.7
FAN13G0082 Fragaria x ananassa HOM05D006134 ORTHO05D007671 1.3e-41 173.3 124 66.1
HanXRQChr10g0314981 Helianthus annuus HOM05D006134 ORTHO05D007671 1.3e-41 173.3 124 63.7
Oeu055649.1 Olea europaea HOM05D006134 ORTHO05D007671 1.3e-41 173.3 124 66.9
Os04g0274400 Oryza sativa ssp. japonica HOM05D006134 ORTHO05D007671 2.3e-41 172.6 124 61.3
Eucgr.F02572 Eucalyptus grandis HOM05D006134 ORTHO05D007671 2.9e-41 172.2 124 65.3
Nitab4.5_0000890g0130 Nicotiana tabacum HOM05D006134 ORTHO05D007671 2.9e-41 172.2 131 63.4
Potri.016G127200 Populus trichocarpa HOM05D006134 ORTHO05D007671 8.6e-41 170.6 118 67.8
Dinv31631 Davidia involucrata HOM05D006134 ORTHO05D007671 1.9e-40 169.5 124 65.3
THA.LOC104807806 Tarenaya hassleriana HOM05D006134 ORTHO05D007671 1.9e-40 169.5 124 66.1
AUR62013003 Chenopodium quinoa HOM05D006134 ORTHO05D007671 2.5e-40 169.1 103 71.8
PSO170G0646 Papaver somniferum HOM05D006134 ORTHO05D007671 2.5e-40 169.1 124 62.9
SGA_v2.0_scaffold80G25864 Striga asiatica HOM05D006134 ORTHO05D007671 2.5e-40 169.1 124 64.5
COL.COLO4_32379 Corchorus olitorius HOM05D006134 ORTHO05D007671 3.3e-40 168.7 124 64.5
SalBow3G4511 Salvia bowleyana HOM05D006134 ORTHO05D007671 4.2e-40 168.3 123 65.0
Sc08g0002730 Simmondsia chinensis HOM05D006134 ORTHO05D007671 4.2e-40 168.3 124 64.5
Thecc.02G130200 Theobroma cacao HOM05D006134 ORTHO05D007671 5.5e-40 167.9 124 64.5
unitig_52.g17376 Utricularia gibba HOM05D006134 ORTHO05D007671 9.5e-40 167.2 130 60.8
Migut.N01297 Erythranthe guttata HOM05D006134 ORTHO05D007671 1.2e-39 166.8 124 63.7
Sp7g37280 Schrenkiella parvula HOM05D006134 ORTHO05D007671 1.6e-39 166.4 124 65.3
AUR62015152 Chenopodium quinoa HOM05D006134 ORTHO05D007671 8.0e-39 164.1 103 69.9
Duzib052G0391 Durio zibethinus HOM05D006134 ORTHO05D007671 8.0e-39 164.1 124 63.7
MSTRG.5438 Avicennia marina HOM05D006134 ORTHO05D007671 1.0e-38 163.7 124 62.1
Gohir.D01G010100 Gossypium hirsutum HOM05D006134 ORTHO05D007671 1.8e-38 162.9 124 63.7
Gorai.002G012200 Gossypium raimondii HOM05D006134 ORTHO05D007671 1.8e-38 162.9 124 63.7
Aa31LG6G16690 Aethionema arabicum HOM05D006134 ORTHO05D007671 2.3e-38 162.5 124 62.9
ClCG11G010360 Citrullus lanatus HOM05D006134 ORTHO05D007671 4.0e-38 161.8 107 68.2
Oeu002964.1 Olea europaea HOM05D006134 ORTHO05D007671 4.0e-38 161.8 124 62.1
AUR62010013 Chenopodium quinoa HOM05D006134 ORTHO05D007671 8.9e-38 160.6 103 68.0
Gohir.A01G010500 Gossypium hirsutum HOM05D006134 ORTHO05D007671 2.0e-37 159.5 124 62.9
Thhalv10026572m.g Eutrema salsugineum HOM05D006134 ORTHO05D007671 4.4e-37 158.3 124 60.5
Duzib248G0743 Durio zibethinus HOM05D006134 ORTHO05D007671 3.7e-36 155.2 149 53.7
AT4G38495 Arabidopsis thaliana HOM05D006134 ORTHO05D007671 1.1e-35 153.7 124 58.1
HanXRQChr07g0198481 Helianthus annuus HOM05D006134 ORTHO05D007671 1.1e-35 153.7 124 57.3
Rhsim11G0193500 Rhododendron simsii HOM05D006134 ORTHO05D007671 1.8e-35 152.9 171 49.1
Carub.0007s0038 Capsella rubella HOM05D006134 ORTHO05D007671 3.1e-35 152.1 118 61.9
Prupe.7G004000 Prunus persica HOM05D006134 ORTHO05D007671 4.1e-35 151.8 124 58.9
vmacro02291 Vaccinium macrocarpon HOM05D006134 ORTHO05D007671 7.0e-35 151.0 203 42.4
AL7G10360 Arabidopsis lyrata HOM05D006134 ORTHO05D007671 4.5e-34 148.3 118 58.5
Sed0020335 Sechium edule HOM05D006134 ORTHO05D007671 5.9e-34 147.9 124 57.3
Zm00001eb420290 Zea mays HOM05D006134 ORTHO05D007671 1.7e-33 146.4 110 55.5
BcaNung01304 Brassica carinata HOM05D006134 ORTHO05D007671 1.6e-31 139.8 123 56.1
C01p00090 Brassica napus HOM05D006134 ORTHO05D007671 1.6e-31 139.8 123 56.1
A01p00050 Brassica napus HOM05D006134 ORTHO05D007671 3.6e-31 138.7 118 56.8
BcaNung04221 Brassica carinata HOM05D006134 ORTHO05D007671 8.9e-30 134.0 124 54.8
SEGI_00696 Sequoiadendron giganteum HOM05D006134 ORTHO05D007671 1.3e-25 120.2 66 83.3
Sabra16G0121200 Salix brachista HOM05D006134 ORTHO05D007671 7.5e-21 104.4 74 64.9
Sabra16G0122100 Salix brachista HOM05D006134 ORTHO05D007671 7.5e-21 104.4 74 64.9
Prupe.4G038000 Prunus persica HOM05D006134 ORTHO05D007671 1.4e-19 100.1 108 50.0
Nitab4.5_0000165g0190 Nicotiana tabacum HOM05D006134 ORTHO05D007671 7.3e-16 87.8 69 63.8
BolC1t00014H Brassica oleracea HOM05D006134 ORTHO05D007671 1.6e-15 86.7 79 53.2
BraA01t00010Z Brassica rapa HOM05D006134 ORTHO05D007671 3.6e-15 85.5 74 54.1
SMO230G0118 Selaginella moellendorffii HOM05D006134 ORTHO05D007671 2.6e-13 79.3 40 87.5
A07p02890 Brassica napus HOM05D006134 ORTHO05D007671 4.4e-13 78.6 71 52.1
BraA07t28089Z Brassica rapa HOM05D006134 ORTHO05D007671 4.4e-13 78.6 71 52.1
Ca_02994_v3 Cicer arietinum L. HOM05D006134 ORTHO05D007671 4.4e-13 78.6 51 68.6
Ca_02756_v3 Cicer arietinum L. HOM05D006134 ORTHO05D007671 2.9e-12 75.9 57 61.4
Ca_02758_v3 Cicer arietinum L. HOM05D006134 ORTHO05D007671 2.9e-12 75.9 57 61.4
TPR.G34385 Trifolium pratense HOM05D006134 ORTHO05D007671 1.6e-10 70.1 44 75.0
Sabra16G0121700 Salix brachista HOM05D006134 ORTHO05D007671 2.7e-10 69.3 45 68.9
SHI24498 Sapria himalayana HOM05D006134 ORTHO05D007671 2.7e-10 69.3 57 56.1
EL10Ac8g18393 Beta vulgaris HOM05D006134 ORTHO05D007671 5.1e-09 65.1 44 72.7
CARHR294230 Cardamine hirsuta HOM05D006134 ORTHO05D007671 5.6e-08 61.6 58 53.4


User provided reference genes

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