Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO367G0716 Selaginella moellendorffii HOM05D007051 ORTHO05D008842 9.7e-119 430.3 232 100.0
Pp3c10_11840 Physcomitrium patens HOM05D007051 ORTHO05D008842 4.4e-55 218.8 227 52.4
PGR031G0283 Punica granatum HOM05D007051 ORTHO05D008842 4.4e-55 218.8 227 52.4
AagrBONN_evm.TU.Sc2ySwM_362.1892 Anthoceros agrestis HOM05D007051 ORTHO05D008842 5.8e-55 218.4 233 52.8
Lsat_1_v5_gn_3_2541 Lactuca sativa HOM05D007051 ORTHO05D008842 9.9e-55 217.6 227 50.7
ATR0665G189 Amborella trichopoda HOM05D007051 ORTHO05D008842 6.4e-54 214.9 227 51.1
DCAR_006807 Daucus carota HOM05D007051 ORTHO05D008842 8.4e-54 214.5 226 51.8
CiPaw.12G105800 Carya illinoinensis HOM05D007051 ORTHO05D008842 2.4e-53 213.0 227 50.7
vmacro14055 Vaccinium macrocarpon HOM05D007051 ORTHO05D008842 3.2e-53 212.6 227 51.1
MELO3C005568.2 Cucumis melo HOM05D007051 ORTHO05D008842 7.1e-53 211.5 225 50.2
Manes.01G074700 Manihot esculenta HOM05D007051 ORTHO05D008842 1.6e-52 210.3 227 50.2
Actinidia27438 Actinidia chinensis HOM05D007051 ORTHO05D008842 2.1e-52 209.9 221 52.0
QL12p014185 Quercus lobata HOM05D007051 ORTHO05D008842 2.7e-52 209.5 226 49.6
Hma1.2p1_1868F.1_g305950 Hydrangea macrophylla HOM05D007051 ORTHO05D008842 4.6e-52 208.8 227 48.5
CANSAT21G0170 Cannabis sativa HOM05D007051 ORTHO05D008842 6.0e-52 208.4 227 49.8
Dinv21586 Davidia involucrata HOM05D007051 ORTHO05D008842 6.0e-52 208.4 227 50.2
CSS0029957 Camellia sinensis var. sinensis HOM05D007051 ORTHO05D008842 7.8e-52 208.0 227 49.3
SEGI_34604 Sequoiadendron giganteum HOM05D007051 ORTHO05D008842 7.8e-52 208.0 227 51.5
Ca_06694_v3 Cicer arietinum L. HOM05D007051 ORTHO05D008842 2.3e-51 206.5 227 48.0
CDE02G0603 Ceratophyllum demersum HOM05D007051 ORTHO05D008842 3.0e-51 206.1 227 48.0
Potri.001G119100 Populus trichocarpa HOM05D007051 ORTHO05D008842 3.0e-51 206.1 227 49.8
CSS0034738 Camellia sinensis var. sinensis HOM05D007051 ORTHO05D008842 3.9e-51 205.7 227 48.9
TAR629G3399 Trochodendron aralioides HOM05D007051 ORTHO05D008842 3.9e-51 205.7 227 49.8
CsaV3_5G003870 Cucumis sativus L. HOM05D007051 ORTHO05D008842 5.1e-51 205.3 225 48.9
FAN08G0417 Fragaria x ananassa HOM05D007051 ORTHO05D008842 5.1e-51 205.3 227 48.9
FAN18G1307 Fragaria x ananassa HOM05D007051 ORTHO05D008842 5.1e-51 205.3 227 48.9
Duzib205G0440 Durio zibethinus HOM05D007051 ORTHO05D008842 6.6e-51 204.9 227 48.5
THA.LOC104809449 Tarenaya hassleriana HOM05D007051 ORTHO05D008842 6.6e-51 204.9 232 47.0
FAN04G1713 Fragaria x ananassa HOM05D007051 ORTHO05D008842 8.7e-51 204.5 227 49.3
Os04g0105700 Oryza sativa ssp. japonica HOM05D007051 ORTHO05D008842 8.7e-51 204.5 227 48.0
Eucgr.D02017 Eucalyptus grandis HOM05D007051 ORTHO05D008842 1.1e-50 204.1 227 48.9
Prupe.5G077000 Prunus persica HOM05D007051 ORTHO05D008842 1.5e-50 203.8 227 48.5
Zm00001eb300480 Zea mays HOM05D007051 ORTHO05D008842 1.5e-50 203.8 227 48.0
GSVIVG01006029001 Vitis vinifera HOM05D007051 ORTHO05D008842 1.9e-50 203.4 227 48.9
Atru.chr9.1399 Acer truncatum HOM05D007051 ORTHO05D008842 2.5e-50 203.0 227 48.9
Nn6g34078 Nelumbo nucifera HOM05D007051 ORTHO05D008842 2.5e-50 203.0 227 48.9
Sabra01G0092000 Salix brachista HOM05D007051 ORTHO05D008842 2.5e-50 203.0 227 48.9
ClCG01G003730 Citrullus lanatus HOM05D007051 ORTHO05D008842 4.3e-50 202.2 225 48.0
FAN13G2377 Fragaria x ananassa HOM05D007051 ORTHO05D008842 5.6e-50 201.8 236 47.5
Lj2g0024450 Lotus japonicus HOM05D007051 ORTHO05D008842 5.6e-50 201.8 227 47.6
SGA_v2.0_scaffold120G32840 Striga asiatica HOM05D007051 ORTHO05D008842 5.6e-50 201.8 227 47.1
Aqoxy7G00687 Aquilegia oxysepala HOM05D007051 ORTHO05D008842 7.3e-50 201.4 226 50.0
Migut.A00866 Erythranthe guttata HOM05D007051 ORTHO05D008842 7.3e-50 201.4 227 48.0
MD04G1081100 Malus domestica HOM05D007051 ORTHO05D008842 7.3e-50 201.4 225 48.4
Nitab4.5_0004482g0060 Nicotiana tabacum HOM05D007051 ORTHO05D008842 7.3e-50 201.4 231 48.9
Solyc08g079240.4 Solanum lycopersicum HOM05D007051 ORTHO05D008842 9.6e-50 201.1 227 48.5
FvH4_5g00440 Fragaria vesca HOM05D007051 ORTHO05D008842 1.6e-49 200.3 225 48.4
Sopen08g027680 Solanum pennellii HOM05D007051 ORTHO05D008842 2.1e-49 199.9 227 48.0
PGSC0003DMG400004734 Solanum tuberosum HOM05D007051 ORTHO05D008842 2.1e-49 199.9 227 48.0
CAN.G1337.17 Capsicum annuum HOM05D007051 ORTHO05D008842 2.8e-49 199.5 227 47.1
Cc08_g13070 Coffea canephora HOM05D007051 ORTHO05D008842 3.6e-49 199.1 227 48.0
MBI04_g32270_MAGBIO Magnolia biondii HOM05D007051 ORTHO05D008842 3.6e-49 199.1 254 46.1
TWI60G1677 Tripterygium wilfordii HOM05D007051 ORTHO05D008842 3.6e-49 199.1 227 48.5
Ciclev10021945m.g Citrus clementina HOM05D007051 ORTHO05D008842 8.1e-49 198.0 227 46.7
PSO675G3044 Papaver somniferum HOM05D007051 ORTHO05D008842 1.1e-48 197.6 225 47.1
PSO717G0094 Papaver somniferum HOM05D007051 ORTHO05D008842 1.4e-48 197.2 225 47.1
Nitab4.5_0010733g0020 Nicotiana tabacum HOM05D007051 ORTHO05D008842 1.8e-48 196.8 231 48.1
SalBow6G1069 Salvia bowleyana HOM05D007051 ORTHO05D008842 2.4e-48 196.4 227 46.7
Medtr5g011990 Medicago truncatula HOM05D007051 ORTHO05D008842 3.1e-48 196.1 227 46.3
Gohir.A11G020000 Gossypium hirsutum HOM05D007051 ORTHO05D008842 5.3e-48 195.3 227 47.6
Sed0010491 Sechium edule HOM05D007051 ORTHO05D008842 6.9e-48 194.9 206 50.0
Peaxi162Scf00002g00416 Petunia axillaris HOM05D007051 ORTHO05D008842 1.2e-47 194.1 227 46.7
MBI04_g42034_MAGBIO Magnolia biondii HOM05D007051 ORTHO05D008842 1.5e-47 193.7 221 48.4
Glyma.11G030400 Glycine max HOM05D007051 ORTHO05D008842 2.0e-47 193.4 227 44.9
arahy.Tifrunner.gnm1.ann1.BK8PZK Arachis hypogaea HOM05D007051 ORTHO05D008842 2.6e-47 193.0 227 44.9
Gohir.D11G019700 Gossypium hirsutum HOM05D007051 ORTHO05D008842 4.5e-47 192.2 225 47.6
Sc01g0009270 Simmondsia chinensis HOM05D007051 ORTHO05D008842 4.5e-47 192.2 228 47.4
Gorai.007G021000 Gossypium raimondii HOM05D007051 ORTHO05D008842 7.6e-47 191.4 227 47.6
arahy.Tifrunner.gnm1.ann1.2BY1CI Arachis hypogaea HOM05D007051 ORTHO05D008842 9.9e-47 191.0 227 44.5
Thhalv10023664m.g Eutrema salsugineum HOM05D007051 ORTHO05D008842 1.3e-46 190.7 227 45.4
AL2G13010 Arabidopsis lyrata HOM05D007051 ORTHO05D008842 1.7e-46 190.3 227 45.4
BcaC04g22447 Brassica carinata HOM05D007051 ORTHO05D008842 2.2e-46 189.9 227 45.8
A09p15970 Brassica napus HOM05D007051 ORTHO05D008842 2.2e-46 189.9 227 45.8
C09p19230 Brassica napus HOM05D007051 ORTHO05D008842 2.2e-46 189.9 227 45.8
BolC9t54830H Brassica oleracea HOM05D007051 ORTHO05D008842 2.2e-46 189.9 227 45.8
BraA09t37232Z Brassica rapa HOM05D007051 ORTHO05D008842 2.2e-46 189.9 227 45.8
Sp2g01860 Schrenkiella parvula HOM05D007051 ORTHO05D008842 3.8e-46 189.1 227 45.4
Hund11573 Selenicereus undatus HOM05D007051 ORTHO05D008842 3.8e-46 189.1 234 44.9
Aa31LG2G320 Aethionema arabicum HOM05D007051 ORTHO05D008842 4.9e-46 188.7 227 45.4
BcaB07g31359 Brassica carinata HOM05D007051 ORTHO05D008842 6.4e-46 188.3 227 45.4
AUR62039918 Chenopodium quinoa HOM05D007051 ORTHO05D008842 1.1e-45 187.6 228 45.2
HanXRQChr17g0549011 Helianthus annuus HOM05D007051 ORTHO05D008842 1.1e-45 187.6 227 45.4
unitig_699.g19761 Utricularia gibba HOM05D001703 ORTHO05D007194 1.1e-45 187.6 220 44.1
CARHR049060 Cardamine hirsuta HOM05D007051 ORTHO05D008842 1.4e-45 187.2 227 44.9
AUR62007459 Chenopodium quinoa HOM05D007051 ORTHO05D008842 1.9e-45 186.8 228 44.3
AT1G62780 Arabidopsis thaliana HOM05D007051 ORTHO05D008842 2.4e-45 186.4 227 44.5
ECA246G0398 Erigeron canadensis HOM05D007051 ORTHO05D008842 2.4e-45 186.4 227 45.8
Lalb_Chr09g0324461 Lupinus albus HOM05D007051 ORTHO05D008842 3.2e-45 186.0 227 44.9
Psat2g179120 Pisum sativum HOM05D007051 ORTHO05D008842 7.1e-45 184.9 227 44.1
RcHm_v2.0_Chr7g0202061 Rosa chinensis HOM05D007051 ORTHO05D008842 3.5e-44 182.6 227 44.5
VMungo1215G1548 Vigna mungo HOM05D007051 ORTHO05D008842 3.5e-44 182.6 227 42.7
Phvul.002G060700 Phaseolus vulgaris HOM05D007051 ORTHO05D008842 1.3e-43 180.6 227 42.7
Haze_08593 Corylus avellana HOM05D007051 ORTHO05D008842 8.7e-43 177.9 206 48.1
MSTRG.12072 Avicennia marina HOM05D007051 ORTHO05D008842 5.6e-42 175.3 227 41.9
Oeu024055.1 Olea europaea HOM05D007051 ORTHO05D008842 2.8e-41 172.9 210 45.2
HPP92_015062 Vanilla planifolia HOM05D007051 ORTHO05D008842 3.7e-41 172.6 207 48.3
Carub.0002s0220 Capsella rubella HOM05D007051 ORTHO05D008842 9.0e-40 167.9 237 40.9
TPR.G820 Trifolium pratense HOM05D007051 ORTHO05D008842 4.5e-39 165.6 190 47.4
Mapoly0062s0102 Marchantia polymorpha HOM05D007051 ORTHO05D008842 5.1e-35 152.1 234 38.9
Thecc.03G259200 Theobroma cacao HOM05D007051 ORTHO05D008842 9.0e-32 141.4 176 43.2
Hma1.2p1_1868F.1_g305940 Hydrangea macrophylla HOM05D007051 ORTHO05D008842 4.2e-29 132.5 157 43.9
Glyma.01G211400 Glycine max HOM05D007051 ORTHO05D008842 1.1e-26 124.4 178 42.7
Cre13.g579550 Chlamydomonas reinhardtii HOM05D007051 ORTHO05D008842 1.6e-25 120.6 229 37.6
Duzib084G0812 Durio zibethinus HOM05D007051 ORTHO05D008842 4.5e-23 112.5 175 38.9
Hma1.2p1_2244F.1_g317930 Hydrangea macrophylla HOM05D007051 ORTHO05D008842 3.8e-22 109.4 120 50.0
PRCOL_00000809 Prasinoderma coloniale HOM05D007051 ORTHO05D008842 8.8e-19 98.2 229 33.6
vmacro16051 Vaccinium macrocarpon HOM05D007051 ORTHO05D008842 1.5e-18 97.4 79 62.0
MCO02G329 Micromonas commoda HOM05D007051 ORTHO05D008842 2.9e-14 83.2 177 31.6
Cpa.g.sc29.111 Carica papaya HOM05D007051 ORTHO05D008842 1.1e-13 81.3 98 41.8
EL10Ac5g12994 Beta vulgaris HOM05D007051 ORTHO05D008842 2.1e-12 77.0 83 47.0
arahy.Tifrunner.gnm1.ann1.VE7KXP Arachis hypogaea HOM05D007051 ORTHO05D008842 1.1e-08 64.7 66 51.5


User provided reference genes

Program Settings