Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO367G0706 Selaginella moellendorffii HOM05D006084 ORTHO05D007449 1.3e-123 446.4 228 100.0
Aqoxy3G02941 Aquilegia oxysepala HOM05D006084 ORTHO05D007449 1.3e-30 137.5 106 65.1
TAR371G1194 Trochodendron aralioides HOM05D006084 ORTHO05D007449 1.1e-29 134.4 104 66.3
ATR0730G058 Amborella trichopoda HOM05D006084 ORTHO05D007449 2.4e-29 133.3 124 56.5
Glyma.04G247000 Glycine max HOM05D006084 ORTHO05D007449 2.4e-29 133.3 105 63.8
Sopen02g031550 Solanum pennellii HOM05D006084 ORTHO05D007449 2.4e-29 133.3 102 65.7
FAN02G2714 Fragaria x ananassa HOM05D006084 ORTHO05D007449 9.2e-29 131.3 106 63.2
FAN05G5625 Fragaria x ananassa HOM05D006084 ORTHO05D007449 9.2e-29 131.3 106 63.2
Glyma.06G115700 Glycine max HOM05D006084 ORTHO05D007449 9.2e-29 131.3 105 61.9
MD17G1033600 Malus domestica HOM05D006084 ORTHO05D007449 9.2e-29 131.3 103 63.1
PSO782G1469 Papaver somniferum HOM05D006084 ORTHO05D007449 1.2e-28 131.0 106 60.4
Ca_16579_v3 Cicer arietinum L. HOM05D006084 ORTHO05D007449 1.6e-28 130.6 107 60.7
Migut.H00108 Erythranthe guttata HOM05D006084 ORTHO05D007449 1.6e-28 130.6 103 63.1
Prupe.3G286100 Prunus persica HOM05D006084 ORTHO05D007449 1.6e-28 130.6 103 63.1
PGSC0003DMG400000490 Solanum tuberosum HOM05D006084 ORTHO05D007449 1.6e-28 130.6 102 64.7
FvH4_6g50830 Fragaria vesca HOM05D006084 ORTHO05D007449 2.7e-28 129.8 106 62.3
Phvul.009G127800 Phaseolus vulgaris HOM05D006084 ORTHO05D007449 2.7e-28 129.8 105 61.9
MSTRG.3166 Avicennia marina HOM05D006084 ORTHO05D007449 3.5e-28 129.4 103 60.2
CSS0000489 Camellia sinensis var. sinensis HOM05D006084 ORTHO05D007449 3.5e-28 129.4 103 63.1
CSS0035017 Camellia sinensis var. sinensis HOM05D006084 ORTHO05D007449 3.5e-28 129.4 103 63.1
CAN.G206.22 Capsicum annuum HOM05D006084 ORTHO05D007449 4.6e-28 129.0 106 61.3
QL02p076043 Quercus lobata HOM05D006084 ORTHO05D007449 4.6e-28 129.0 104 62.5
QL02p076078 Quercus lobata HOM05D006084 ORTHO05D007449 4.6e-28 129.0 104 62.5
TPR.G13476 Trifolium pratense HOM05D006084 ORTHO05D007449 4.6e-28 129.0 106 62.3
ATR1096G027 Amborella trichopoda HOM05D006084 ORTHO05D007449 5.9e-28 128.6 127 53.5
Hma1.2p1_0846F.1_g227700 Hydrangea macrophylla HOM05D006084 ORTHO05D007449 5.9e-28 128.6 106 63.2
Lj1g0023236 Lotus japonicus HOM05D006084 ORTHO05D007449 5.9e-28 128.6 106 62.3
Mapoly0005s0179 Marchantia polymorpha HOM05D006084 ORTHO05D007449 5.9e-28 128.6 102 60.8
Haze_14684 Corylus avellana HOM05D006084 ORTHO05D007449 7.8e-28 128.3 104 62.5
FAN14G2625 Fragaria x ananassa HOM05D006084 ORTHO05D007449 7.8e-28 128.3 106 61.3
Medtr3g088470 Medicago truncatula HOM05D006084 ORTHO05D007449 7.8e-28 128.3 107 59.8
PSO210G7688 Papaver somniferum HOM05D006084 ORTHO05D007449 7.8e-28 128.3 106 60.4
Rhsim08G0053800 Rhododendron simsii HOM05D006084 ORTHO05D007449 7.8e-28 128.3 103 62.1
RcHm_v2.0_Chr2g0172221 Rosa chinensis HOM05D006084 ORTHO05D007449 7.8e-28 128.3 105 62.9
Sed0018290 Sechium edule HOM05D006084 ORTHO05D007449 7.8e-28 128.3 105 61.0
Sc03g0007970 Simmondsia chinensis HOM05D006084 ORTHO05D007449 7.8e-28 128.3 121 55.4
CDE08G0643 Ceratophyllum demersum HOM05D006084 ORTHO05D007449 1.0e-27 127.9 116 58.6
Atru.chr6.2220 Acer truncatum HOM05D006084 ORTHO05D007449 1.3e-27 127.5 107 59.8
Actinidia35746 Actinidia chinensis HOM05D006084 ORTHO05D007449 1.3e-27 127.5 104 61.5
Dinv33481 Davidia involucrata HOM05D006084 ORTHO05D007449 1.7e-27 127.1 103 63.1
ECA238G3069 Erigeron canadensis HOM05D006084 ORTHO05D007449 1.7e-27 127.1 105 60.0
Potri.001G349500 Populus trichocarpa HOM05D006084 ORTHO05D007449 1.7e-27 127.1 103 61.2
Cfa007418 Carpinus fangiana HOM05D006084 ORTHO05D007449 2.9e-27 126.3 104 61.5
Eucgr.I01785 Eucalyptus grandis HOM05D006084 ORTHO05D007449 3.9e-27 125.9 105 60.0
Manes.17G116000 Manihot esculenta HOM05D006084 ORTHO05D007449 3.9e-27 125.9 104 62.5
CANSAT64G0964 Cannabis sativa HOM05D006084 ORTHO05D007449 5.0e-27 125.6 103 59.2
CiPaw.03G039200 Carya illinoinensis HOM05D006084 ORTHO05D007449 6.6e-27 125.2 104 61.5
PSO566G0352 Papaver somniferum HOM05D006084 ORTHO05D007449 6.6e-27 125.2 106 56.6
Hma1.2p1_0056F.1_g031653 Hydrangea macrophylla HOM05D006084 ORTHO05D007449 1.1e-26 124.4 91 69.2
GSVIVG01032459001 Vitis vinifera HOM05D006084 ORTHO05D007449 1.1e-26 124.4 103 63.1
HanXRQChr07g0198791 Helianthus annuus HOM05D006084 ORTHO05D007449 1.5e-26 124.0 106 57.5
Peaxi162Scf00129g01228 Petunia axillaris HOM05D006084 ORTHO05D007449 1.9e-26 123.6 90 67.8
CsaV3_5G027340 Cucumis sativus L. HOM05D006084 ORTHO05D007449 2.5e-26 123.2 105 59.0
Hund02345 Selenicereus undatus HOM05D006084 ORTHO05D007449 2.5e-26 123.2 103 58.3
Os10g0395500 Oryza sativa ssp. japonica HOM05D006084 ORTHO05D007449 3.3e-26 122.9 105 59.0
THA.LOC104821076 Tarenaya hassleriana HOM05D006084 ORTHO05D007449 4.3e-26 122.5 107 59.8
arahy.Tifrunner.gnm1.ann1.2LS7ZQ Arachis hypogaea HOM05D006084 ORTHO05D007449 5.6e-26 122.1 104 59.6
MELO3C005689.2 Cucumis melo HOM05D006084 ORTHO05D007449 5.6e-26 122.1 105 60.0
Lalb_Chr10g0093921 Lupinus albus HOM05D006084 ORTHO05D007449 5.6e-26 122.1 106 58.5
PGR142G2538 Punica granatum HOM05D006084 ORTHO05D007449 7.3e-26 121.7 101 59.4
Thecc.04G011100 Theobroma cacao HOM05D006084 ORTHO05D007449 7.3e-26 121.7 104 60.6
Gohir.D07G227900 Gossypium hirsutum HOM05D006084 ORTHO05D007449 9.5e-26 121.3 107 57.9
Hma1.2p1_1415F.1_g281960 Hydrangea macrophylla HOM05D006084 ORTHO05D007449 9.5e-26 121.3 95 66.3
A02p02680 Brassica napus HOM05D006084 ORTHO05D007449 1.2e-25 120.9 105 58.1
BraA02t05237Z Brassica rapa HOM05D006084 ORTHO05D007449 1.2e-25 120.9 105 58.1
Oeu004718.1 Olea europaea HOM05D006084 ORTHO05D007449 1.6e-25 120.6 103 58.3
BcaNung03101 Brassica carinata HOM05D006084 ORTHO05D007449 2.1e-25 120.2 106 57.5
Gohir.A07G221200 Gossypium hirsutum HOM05D006084 ORTHO05D007449 3.6e-25 119.4 107 56.1
Pp3c26_1260 Physcomitrium patens HOM05D006084 ORTHO05D007449 3.6e-25 119.4 112 53.6
arahy.Tifrunner.gnm1.ann1.DMWP0X Arachis hypogaea HOM05D006084 ORTHO05D007449 4.7e-25 119.0 104 58.7
BcaC04g19017 Brassica carinata HOM05D006084 ORTHO05D007449 4.7e-25 119.0 105 57.1
Thhalv10015025m.g Eutrema salsugineum HOM05D006084 ORTHO05D007449 4.7e-25 119.0 103 59.2
FAN09G3162 Fragaria x ananassa HOM05D006084 ORTHO05D007449 4.7e-25 119.0 91 65.9
HanXRQChr14g0450361 Helianthus annuus HOM05D006084 ORTHO05D007449 4.7e-25 119.0 102 56.9
Gorai.001G262800 Gossypium raimondii HOM05D006084 ORTHO05D007449 6.1e-25 118.6 104 58.7
arahy.Tifrunner.gnm1.ann1.GQ5XJ3 Arachis hypogaea HOM05D006084 ORTHO05D007449 8.0e-25 118.2 121 52.1
Carub.0006s1288 Capsella rubella HOM05D006084 ORTHO05D007449 1.4e-24 117.5 105 58.1
arahy.Tifrunner.gnm1.ann1.48HX9C Arachis hypogaea HOM05D006084 ORTHO05D007449 2.3e-24 116.7 104 57.7
A03p06720 Brassica napus HOM05D006084 ORTHO05D007449 2.3e-24 116.7 105 57.1
BraA03t10005Z Brassica rapa HOM05D006084 ORTHO05D007449 2.3e-24 116.7 105 57.1
BcaB01g05101 Brassica carinata HOM05D006084 ORTHO05D007449 4.0e-24 115.9 105 55.2
C03p07740 Brassica napus HOM05D006084 ORTHO05D007449 4.0e-24 115.9 105 55.2
BolC3t13274H Brassica oleracea HOM05D006084 ORTHO05D007449 4.0e-24 115.9 105 55.2
Aa31LG11G14750 Aethionema arabicum HOM05D006084 ORTHO05D007449 6.8e-24 115.2 105 56.2
AL6G25480 Arabidopsis lyrata HOM05D006084 ORTHO05D007449 6.8e-24 115.2 105 57.1
C09p62430 Brassica napus HOM05D006084 ORTHO05D007449 6.8e-24 115.2 102 56.9
unitig_746.g26552 Utricularia gibba HOM05D006084 ORTHO05D007449 6.8e-24 115.2 105 55.2
AT5G14710 Arabidopsis thaliana HOM05D006084 ORTHO05D007449 8.9e-24 114.8 105 56.2
Cc07_g02120 Coffea canephora HOM05D006084 ORTHO05D007449 8.9e-24 114.8 103 53.4
BcaC03g13452 Brassica carinata HOM05D006084 ORTHO05D007449 1.2e-23 114.4 105 55.2
C02p07250 Brassica napus HOM05D006084 ORTHO05D007449 1.2e-23 114.4 105 55.2
BolC2t06657H Brassica oleracea HOM05D006084 ORTHO05D007449 1.2e-23 114.4 105 55.2
CARHR198600 Cardamine hirsuta HOM05D006084 ORTHO05D007449 1.2e-23 114.4 107 54.2
Sp6g29330 Schrenkiella parvula HOM05D006084 ORTHO05D007449 1.5e-23 114.0 105 55.2
Zm00001eb048120 Zea mays HOM05D006084 ORTHO05D007449 1.5e-23 114.0 103 56.3
HPP92_022049 Vanilla planifolia HOM05D006084 ORTHO05D007449 5.8e-23 112.1 103 56.3
COL.COLO4_28991 Corchorus olitorius HOM05D006084 ORTHO05D007449 7.5e-23 111.7 120 52.5
TWI12G0619 Tripterygium wilfordii HOM05D006084 ORTHO05D007449 7.5e-23 111.7 106 54.7
BolC9t59081H Brassica oleracea HOM05D006084 ORTHO05D007449 9.8e-23 111.3 102 55.9
ClCG00G003490 Citrullus lanatus HOM05D006084 ORTHO05D007449 1.3e-22 110.9 127 48.0
ClCG09G019010 Citrullus lanatus HOM05D006084 ORTHO05D007449 1.3e-22 110.9 127 48.0
SGA_v2.0_scaffold2848G54225 Striga asiatica HOM05D006084 ORTHO05D007449 2.9e-22 109.8 100 54.0
EL10Ac3g07214 Beta vulgaris HOM05D006084 ORTHO05D007449 4.9e-22 109.0 98 57.1
MBI19_g17406_MAGBIO Magnolia biondii HOM05D006084 ORTHO05D007449 8.3e-22 108.2 130 47.7
SHI16396 Sapria himalayana HOM05D006084 ORTHO05D007449 3.2e-21 106.3 89 57.3
MBI19_g07248_MAGBIO Magnolia biondii HOM05D006084 ORTHO05D007449 2.7e-20 103.2 132 47.0
Nn3g16859 Nelumbo nucifera HOM05D006084 ORTHO05D007449 4.6e-20 102.4 76 68.4
CBR_g5628 Chara braunii HOM05D006084 ORTHO05D007449 1.3e-19 100.9 104 49.0
DCAR_011237 Daucus carota HOM05D006084 ORTHO05D007449 1.3e-19 100.9 87 60.9
AagrBONN_evm.TU.Sc2ySwM_228.3157 Anthoceros agrestis HOM05D006084 ORTHO05D007449 2.3e-19 100.1 81 56.8
AUR62031990 Chenopodium quinoa HOM05D006084 ORTHO05D007449 1.1e-18 97.8 91 60.4
Solyc02g086780.4 Solanum lycopersicum HOM05D006084 ORTHO05D007449 3.3e-18 96.3 66 74.2
Nitab4.5_0007141g0020 Nicotiana tabacum HOM05D006084 ORTHO05D007449 4.3e-18 95.9 94 55.3
Cpa.g.c30698.2 Carica papaya HOM05D006084 ORTHO05D007449 7.3e-18 95.1 73 68.5
Duzib264G1216 Durio zibethinus HOM05D006084 ORTHO05D007449 2.1e-17 93.6 109 45.0
Sabra16G0228900 Salix brachista HOM05D006084 ORTHO05D007449 2.1e-17 93.6 198 34.3
Lsat_1_v5_gn_2_91880 Lactuca sativa HOM05D006084 ORTHO05D007449 3.4e-15 86.3 103 45.6
BraA10t44460Z Brassica rapa HOM05D006084 ORTHO05D007449 3.7e-14 82.8 89 51.7
Ciclev10017692m.g Citrus clementina HOM05D006084 ORTHO05D007449 4.9e-14 82.4 68 57.4
Nitab4.5_0006281g0070 Nicotiana tabacum HOM05D006084 ORTHO05D007449 6.4e-14 82.0 62 66.1
Cre13.g571000 Chlamydomonas reinhardtii HOM05D006084 ORTHO05D007449 1.4e-13 80.9 100 36.0
Ca_03224_v3 Cicer arietinum L. HOM05D006084 ORTHO05D007449 3.2e-13 79.7 71 50.7
Os01g0339600 Oryza sativa ssp. japonica HOM05D006084 ORTHO05D007449 3.5e-12 76.3 73 56.2
AUR62030334 Chenopodium quinoa HOM05D006084 ORTHO05D007449 9.5e-10 68.2 67 43.3
arahy.Tifrunner.gnm1.ann1.2H702Y Arachis hypogaea HOM05D006084 ORTHO05D007449 6.2e-09 65.5 62 51.6
MCO07G269 Micromonas commoda HOM05D006084 ORTHO05D007449 1.8e-08 63.9 97 36.1
SEGI_25092 Sequoiadendron giganteum HOM05D006084 ORTHO05D007449 5.8e-07 58.9 62 41.9
MELO3C033557.2 Cucumis melo HOM05D006084 ORTHO05D007449 2.9e-06 56.6 80 43.8


User provided reference genes

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