Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO367G0698 Selaginella moellendorffii HOM05D007512 ORTHO05D009524 1.5e-129 466.1 223 100.0
AagrBONN_evm.TU.Sc2ySwM_368.3309 Anthoceros agrestis HOM05D007512 ORTHO05D009524 8.4e-35 151.4 207 40.6
Pp3c3_10350 Physcomitrium patens HOM05D007512 ORTHO05D009524 4.2e-34 149.1 263 33.8
Potri.002G056400 Populus trichocarpa HOM05D007512 ORTHO05D009524 1.3e-32 144.1 213 39.0
Sabra02G0045700 Salix brachista HOM05D007512 ORTHO05D009524 1.7e-32 143.7 213 38.5
Mapoly0032s0087 Marchantia polymorpha HOM05D007512 ORTHO05D009524 2.3e-32 143.3 207 36.7
Nn7g38052 Nelumbo nucifera HOM05D007512 ORTHO05D009524 3.9e-32 142.5 219 37.0
Nn7g38060 Nelumbo nucifera HOM05D007512 ORTHO05D009524 5.1e-32 142.1 219 37.0
CAN.G358.11 Capsicum annuum HOM05D007512 ORTHO05D009524 2.5e-31 139.8 221 38.0
Cfa005459 Carpinus fangiana HOM05D007512 ORTHO05D009524 2.5e-31 139.8 222 36.0
Peaxi162Scf00359g00113 Petunia axillaris HOM05D007512 ORTHO05D009524 4.3e-31 139.0 221 37.1
Haze_01852 Corylus avellana HOM05D007512 ORTHO05D009524 7.3e-31 138.3 222 35.6
TAR626G1484 Trochodendron aralioides HOM05D007512 ORTHO05D009524 1.6e-30 137.1 217 38.2
Manes.12G132100 Manihot esculenta HOM05D007512 ORTHO05D009524 2.8e-30 136.3 218 36.7
GSVIVG01020824001 Vitis vinifera HOM05D007512 ORTHO05D009524 2.8e-30 136.3 221 35.7
Duzib147G0049 Durio zibethinus HOM05D007512 ORTHO05D009524 4.8e-30 135.6 223 35.0
ATR0763G176 Amborella trichopoda HOM05D007512 ORTHO05D009524 2.4e-29 133.3 216 35.6
Rhsim12G0013200 Rhododendron simsii HOM05D007512 ORTHO05D009524 2.4e-29 133.3 220 35.0
RcHm_v2.0_Chr2g0152451 Rosa chinensis HOM05D007512 ORTHO05D009524 2.4e-29 133.3 213 37.1
PGSC0003DMG400045865 Solanum tuberosum HOM05D007512 ORTHO05D009524 2.4e-29 133.3 215 37.2
PGSC0003DMG402000923 Solanum tuberosum HOM05D007512 ORTHO05D009524 2.4e-29 133.3 215 37.2
CAN.G946.8 Capsicum annuum HOM05D007512 ORTHO05D009524 3.1e-29 132.9 214 36.0
Pp3c26_9780 Physcomitrium patens HOM05D007512 ORTHO05D009524 5.3e-29 132.1 257 31.5
Nitab4.5_0001552g0120 Nicotiana tabacum HOM05D007512 ORTHO05D009524 6.9e-29 131.7 219 34.2
Nitab4.5_0007814g0010 Nicotiana tabacum HOM05D007512 ORTHO05D009524 6.9e-29 131.7 221 35.7
HPP92_026664 Vanilla planifolia HOM05D007512 ORTHO05D009524 1.2e-28 131.0 210 35.2
Gorai.007G071100 Gossypium raimondii HOM05D007512 ORTHO05D009524 2.6e-28 129.8 223 35.0
Cpa.g.sc53.33 Carica papaya HOM05D007512 ORTHO05D009524 3.4e-28 129.4 220 35.5
MELO3C022965.2 Cucumis melo HOM05D007512 ORTHO05D009524 3.4e-28 129.4 212 35.4
CsaV3_4G032050 Cucumis sativus L. HOM05D007512 ORTHO05D009524 3.4e-28 129.4 212 34.9
Solyc07g044970.1 Solanum lycopersicum HOM05D007512 ORTHO05D009524 3.4e-28 129.4 219 36.1
CiPaw.09G218400 Carya illinoinensis HOM05D007512 ORTHO05D009524 4.5e-28 129.0 221 35.3
Gohir.A11G061700 Gossypium hirsutum HOM05D007512 ORTHO05D009524 4.5e-28 129.0 226 35.0
Gohir.D11G065600 Gossypium hirsutum HOM05D007512 ORTHO05D009524 5.8e-28 128.6 223 35.0
Lj1C588G3 Lonicera japonica HOM05D007512 ORTHO05D009524 5.8e-28 128.6 221 34.8
SEGI_32907 Sequoiadendron giganteum HOM05D007512 ORTHO05D009524 5.8e-28 128.6 203 36.0
Gohir.D11G065833 Gossypium hirsutum HOM05D007512 ORTHO05D009524 1.3e-27 127.5 209 36.4
QL08p045474 Quercus lobata HOM05D007512 ORTHO05D009524 1.7e-27 127.1 215 34.9
ClCG11G016580 Citrullus lanatus HOM05D007512 ORTHO05D009524 2.2e-27 126.7 211 35.5
Sopen07g023500 Solanum pennellii HOM05D007512 ORTHO05D009524 2.2e-27 126.7 219 36.1
Thecc.01G167000 Theobroma cacao HOM05D007512 ORTHO05D009524 2.9e-27 126.3 223 34.1
COL.COLO4_29884 Corchorus olitorius HOM05D007512 ORTHO05D009524 3.8e-27 125.9 203 37.9
Prupe.3G178900 Prunus persica HOM05D007512 ORTHO05D009524 3.8e-27 125.9 219 35.6
Psat2g017680 Pisum sativum HOM05D007512 ORTHO05D009524 4.9e-27 125.6 219 35.6
Migut.J01325 Erythranthe guttata HOM05D007512 ORTHO05D009524 6.4e-27 125.2 205 38.0
Aqoxy1G01494 Aquilegia oxysepala HOM05D007512 ORTHO05D009524 8.4e-27 124.8 221 33.0
Zm00001eb300410 Zea mays HOM05D007512 ORTHO05D009524 8.4e-27 124.8 221 35.3
FvH4_6g38852 Fragaria vesca HOM05D007512 ORTHO05D009524 1.1e-26 124.4 220 34.5
Sed0022455 Sechium edule HOM05D007512 ORTHO05D009524 1.9e-26 123.6 214 33.2
Phvul.008G196000 Phaseolus vulgaris HOM05D007512 ORTHO05D009524 2.4e-26 123.2 211 33.6
LjContig00049g0018887 Lotus japonicus HOM05D007512 ORTHO05D009524 3.2e-26 122.9 204 36.8
MBI18_g45404_MAGBIO Magnolia biondii HOM05D007512 ORTHO05D009524 3.2e-26 122.9 223 34.5
Medtr5g090740 Medicago truncatula HOM05D007512 ORTHO05D009524 4.2e-26 122.5 212 34.9
HanXRQChr05g0157121 Helianthus annuus HOM05D007512 ORTHO05D009524 5.4e-26 122.1 205 35.1
CSS0030250 Camellia sinensis var. sinensis HOM05D007512 ORTHO05D009524 7.1e-26 121.7 208 35.1
SGA_v2.0_scaffold45G17047 Striga asiatica HOM05D007512 ORTHO05D009524 1.2e-25 120.9 206 37.4
Eucgr.A02034 Eucalyptus grandis HOM05D007512 ORTHO05D009524 2.1e-25 120.2 207 34.3
Ciclev10032522m.g Citrus clementina HOM05D007512 ORTHO05D009524 6.0e-25 118.6 211 33.6
Dinv27197 Davidia involucrata HOM05D007512 ORTHO05D009524 1.8e-24 117.1 208 35.1
Sc23g0003420 Simmondsia chinensis HOM05D007512 ORTHO05D009524 1.8e-24 117.1 220 32.7
VMungo0647G1345 Vigna mungo HOM05D007512 ORTHO05D009524 1.8e-24 117.1 211 33.2
ECA246G3016 Erigeron canadensis HOM05D007512 ORTHO05D009524 3.9e-24 115.9 205 34.6
Ca_06252_v3 Cicer arietinum L. HOM05D007512 ORTHO05D009524 5.1e-24 115.5 207 34.3
unitig_747.g21446 Utricularia gibba HOM05D007512 ORTHO05D009524 6.7e-24 115.2 199 32.7
TPR.G8778 Trifolium pratense HOM05D007512 ORTHO05D009524 8.7e-24 114.8 211 33.6
Os07g0160300 Oryza sativa ssp. japonica HOM05D007512 ORTHO05D009524 1.1e-23 114.4 203 37.4
arahy.Tifrunner.gnm1.ann1.EFEG4J Arachis hypogaea HOM05D007512 ORTHO05D009524 4.3e-23 112.5 212 31.6
AUR62004262 Chenopodium quinoa HOM05D007512 ORTHO05D009524 4.3e-23 112.5 221 34.4
TWI14G0908 Tripterygium wilfordii HOM05D007512 ORTHO05D009524 1.3e-22 110.9 212 32.1
Oeu021245.2 Olea europaea HOM05D007512 ORTHO05D009524 1.6e-22 110.5 200 32.5
Gohir.A11G061633 Gossypium hirsutum HOM05D007512 ORTHO05D009524 2.8e-22 109.8 226 31.9
MBI18_g43440_MAGBIO Magnolia biondii HOM05D007512 ORTHO05D009524 3.6e-22 109.4 194 34.0
Lalb_Chr11g0069491 Lupinus albus HOM05D007512 ORTHO05D009524 6.2e-22 108.6 205 31.7
Glyma.02G283200 Glycine max HOM05D007512 ORTHO05D009524 1.1e-21 107.8 211 31.8
CSS0045166 Camellia sinensis var. sinensis HOM05D007512 ORTHO05D009524 3.1e-21 106.3 144 42.4
AUR62042750 Chenopodium quinoa HOM05D007512 ORTHO05D009524 2.6e-20 103.2 216 33.3
Ah.05g175540 Amaranthus hybridus HOM05D007512 ORTHO05D009524 2.2e-19 100.1 204 30.4
Nitab4.5_0000241g0240 Nicotiana tabacum HOM05D007512 ORTHO05D009524 2.7e-17 93.2 221 30.8
Actinidia24467 Actinidia chinensis HOM05D007512 ORTHO05D009524 2.1e-14 83.6 227 30.0
CSS0013803 Camellia sinensis var. sinensis HOM05D007512 ORTHO05D009524 2.1e-14 83.6 215 26.0
Lsat_1_v5_gn_5_21320 Lactuca sativa HOM05D007512 ORTHO05D009524 3.7e-14 82.8 216 27.3
Actinidia25706 Actinidia chinensis HOM05D007512 ORTHO05D009524 2.0e-12 77.0 129 34.1
Actinidia25705 Actinidia chinensis HOM05D007512 ORTHO05D009524 3.4e-12 76.3 140 35.0
Actinidia18710 Actinidia chinensis HOM05D007512 ORTHO05D009524 4.5e-12 75.9 131 31.3
TWI36G1125 Tripterygium wilfordii HOM05D007512 ORTHO05D009524 2.2e-11 73.6 205 29.3
Actinidia18709 Actinidia chinensis HOM05D007512 ORTHO05D009524 8.4e-11 71.6 203 25.1
Actinidia02493 Actinidia chinensis HOM05D007512 ORTHO05D009524 2.5e-10 70.1 207 26.1
PGR142G3775 Punica granatum HOM05D007512 ORTHO05D009524 3.2e-10 69.7 126 31.0
Actinidia22804 Actinidia chinensis HOM05D007512 ORTHO05D009524 4.2e-10 69.3 205 24.9
Actinidia40448 Actinidia chinensis HOM05D007512 ORTHO05D009524 5.5e-10 68.9 205 24.9
Actinidia24468 Actinidia chinensis HOM05D007512 ORTHO05D009524 1.6e-09 67.4 127 30.7
Atru.chr6.2019 Acer truncatum HOM05D007512 ORTHO05D009524 2.8e-06 56.6 117 29.1
Sabra01G0030800 Salix brachista HOM05D007512 ORTHO05D009524 8.2e-06 55.1 119 29.4


User provided reference genes

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