Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO367G0665 Selaginella moellendorffii HOM05D001304 ORTHO05D008890 2.2e-94 349.0 180 100.0
Pp3c14_9580 Physcomitrium patens HOM05D001304 ORTHO05D008890 1.1e-37 160.6 137 52.6
SEGI_40444 Sequoiadendron giganteum HOM05D001304 ORTHO05D008890 1.5e-37 160.2 147 51.7
AagrBONN_evm.TU.Sc2ySwM_368.469 Anthoceros agrestis HOM05D001304 ORTHO05D008890 9.4e-37 157.5 169 45.6
Mapoly0101s0039 Marchantia polymorpha HOM05D001304 ORTHO05D008890 2.0e-34 149.8 170 43.5
Os02g0600200 Oryza sativa ssp. japonica HOM05D001304 ORTHO05D008890 4.5e-31 138.7 167 45.5
Glyma.11G246700 Glycine max HOM05D001304 ORTHO05D008890 1.3e-30 137.1 160 45.6
BcaC08g46187 Brassica carinata HOM05D001304 ORTHO05D008890 1.7e-30 136.7 168 43.5
C06p42370 Brassica napus HOM05D001304 ORTHO05D007800 1.7e-30 136.7 168 43.5
CDE09G0600 Ceratophyllum demersum HOM05D001304 ORTHO05D008890 1.7e-30 136.7 156 41.0
Thhalv10019020m.g Eutrema salsugineum HOM05D001304 ORTHO05D008890 2.3e-30 136.3 159 45.9
ATR0824G252 Amborella trichopoda HOM05D001304 ORTHO05D008890 2.9e-30 136.0 157 43.3
Phvul.001G258300 Phaseolus vulgaris HOM05D001304 ORTHO05D008890 2.9e-30 136.0 159 45.9
Sc04g0009800 Simmondsia chinensis HOM05D001304 ORTHO05D008890 2.9e-30 136.0 163 44.8
Zm00001eb246340 Zea mays HOM05D001304 ORTHO05D008890 2.9e-30 136.0 177 41.8
EL10As2g23248 Beta vulgaris HOM05D001304 ORTHO05D008890 3.8e-30 135.6 156 46.2
Nitab4.5_0000041g0390 Nicotiana tabacum HOM05D001304 ORTHO05D008890 6.5e-30 134.8 160 45.0
PGSC0003DMG400017453 Solanum tuberosum HOM05D001304 ORTHO05D008890 6.5e-30 134.8 160 46.2
Ah.02g130500 Amaranthus hybridus HOM05D001304 ORTHO05D008890 8.6e-30 134.4 156 45.5
Solyc05g014310.3 Solanum lycopersicum HOM05D001304 ORTHO05D008890 8.6e-30 134.4 160 45.6
Sopen05g009420 Solanum pennellii HOM05D001304 ORTHO05D008890 8.6e-30 134.4 171 44.4
Sp5g22690 Schrenkiella parvula HOM05D001304 ORTHO05D008890 1.1e-29 134.0 159 45.3
BcaB03g15175 Brassica carinata HOM05D001304 ORTHO05D008890 1.5e-29 133.7 158 44.9
A07p32450 Brassica napus HOM05D001304 ORTHO05D008890 1.5e-29 133.7 165 43.6
BraA07t30869Z Brassica rapa HOM05D001304 ORTHO05D008890 1.5e-29 133.7 165 43.6
Migut.K00680 Erythranthe guttata HOM05D001304 ORTHO05D008890 1.5e-29 133.7 159 43.4
BcaC08g46045 Brassica carinata HOM05D001304 ORTHO05D008890 1.9e-29 133.3 166 44.0
C06p38480 Brassica napus HOM05D001304 ORTHO05D008890 1.9e-29 133.3 166 44.0
TAR622G1249 Trochodendron aralioides HOM05D001304 ORTHO05D008890 1.9e-29 133.3 159 43.4
MSTRG.7966 Avicennia marina HOM05D001304 ORTHO05D008890 2.5e-29 132.9 159 44.0
CDE02G1129 Ceratophyllum demersum HOM05D001304 ORTHO05D008890 2.5e-29 132.9 157 40.8
Cc11_g16390 Coffea canephora HOM05D001304 ORTHO05D008890 2.5e-29 132.9 164 43.3
VMungo1383G0240 Vigna mungo HOM05D001304 ORTHO05D008890 2.5e-29 132.9 159 44.0
CiPaw.05G174500 Carya illinoinensis HOM05D001304 ORTHO05D008890 3.2e-29 132.5 159 42.8
Ca_16494_v3 Cicer arietinum L. HOM05D001304 ORTHO05D008890 3.2e-29 132.5 160 46.9
AL2G26400 Arabidopsis lyrata HOM05D001304 ORTHO05D008890 4.2e-29 132.1 159 44.0
AT1G67700 Arabidopsis thaliana HOM05D001304 ORTHO05D008890 4.2e-29 132.1 159 44.0
CsaV3_2G025190 Cucumis sativus L. HOM05D001304 ORTHO05D008890 4.2e-29 132.1 163 42.3
RcHm_v2.0_Chr4g0431911 Rosa chinensis HOM05D001304 ORTHO05D008890 5.5e-29 131.7 165 41.8
Hund06057 Selenicereus undatus HOM05D001304 ORTHO05D008890 5.5e-29 131.7 166 42.2
Aa31LG4G12100 Aethionema arabicum HOM05D001304 ORTHO05D008890 7.2e-29 131.3 164 43.3
AUR62024180 Chenopodium quinoa HOM05D001304 ORTHO05D008890 7.2e-29 131.3 163 44.2
Rhsim12G0107100 Rhododendron simsii HOM05D001304 ORTHO05D008890 7.2e-29 131.3 160 42.5
Atru.chr11.2216 Acer truncatum HOM05D001304 ORTHO05D008890 1.2e-28 130.6 162 42.6
unitig_8.g2912 Utricularia gibba HOM05D000468 ORTHO05D008890 1.2e-28 130.6 142 45.1
CARHR060290 Cardamine hirsuta HOM05D001304 ORTHO05D008890 1.6e-28 130.2 156 44.2
FvH4_4g24830 Fragaria vesca HOM05D001304 ORTHO05D008890 1.6e-28 130.2 160 42.5
FAN07G1515 Fragaria x ananassa HOM05D001304 ORTHO05D008890 1.6e-28 130.2 160 42.5
FAN12G0763 Fragaria x ananassa HOM05D001304 ORTHO05D008890 1.6e-28 130.2 160 42.5
FAN17G2678 Fragaria x ananassa HOM05D001304 ORTHO05D008890 1.6e-28 130.2 160 42.5
FAN22G1346 Fragaria x ananassa HOM05D001304 ORTHO05D008890 1.6e-28 130.2 160 42.5
SGA_v2.0_scaffold484G52361 Striga asiatica HOM05D001304 ORTHO05D008890 1.6e-28 130.2 157 43.9
Ciclev10032669m.g Citrus clementina HOM05D001304 ORTHO05D008890 2.1e-28 129.8 164 42.7
Oeu020321.1 Olea europaea HOM05D001304 ORTHO05D008890 2.1e-28 129.8 165 41.2
Peaxi162Scf00128g00729 Petunia axillaris HOM05D001304 ORTHO05D008890 2.1e-28 129.8 160 45.0
AUR62005553 Chenopodium quinoa HOM05D001304 ORTHO05D008890 2.8e-28 129.4 156 44.2
Manes.12G017100 Manihot esculenta HOM05D001304 ORTHO05D008890 3.6e-28 129.0 172 40.7
Prupe.1G237600 Prunus persica HOM05D001304 ORTHO05D008890 3.6e-28 129.0 165 40.0
HPP92_004594 Vanilla planifolia HOM05D001304 ORTHO05D008890 3.6e-28 129.0 148 40.5
Actinidia15135 Actinidia chinensis HOM05D001304 ORTHO05D008890 4.7e-28 128.6 160 43.1
CANSAT01G0179 Cannabis sativa HOM05D001304 ORTHO05D008890 4.7e-28 128.6 165 41.2
PGR119G0865 Punica granatum HOM05D001304 ORTHO05D008890 4.7e-28 128.6 169 42.6
Dinv11009 Davidia involucrata HOM05D001304 ORTHO05D008890 6.1e-28 128.3 164 40.9
Sabra10G0017000 Salix brachista HOM05D001304 ORTHO05D008890 8.0e-28 127.9 158 41.8
SalBow2G0118 Salvia bowleyana HOM05D001304 ORTHO05D008890 8.0e-28 127.9 165 40.6
THA.LOC104825532 Tarenaya hassleriana HOM05D001304 ORTHO05D008890 8.0e-28 127.9 166 41.6
HanXRQChr08g0207321 Helianthus annuus HOM05D001304 ORTHO05D008890 1.0e-27 127.5 136 45.6
ECA233G5962 Erigeron canadensis HOM05D000468 ORTHO05D000548 1.4e-27 127.1 170 40.0
Haze_12318 Corylus avellana HOM05D001304 ORTHO05D008890 1.8e-27 126.7 162 41.4
Carub.0002s1413 Capsella rubella HOM05D001304 ORTHO05D008890 2.3e-27 126.3 156 42.3
Eucgr.H04690 Eucalyptus grandis HOM05D001304 ORTHO05D008890 2.3e-27 126.3 158 41.8
COL.COLO4_23565 Corchorus olitorius HOM05D001304 ORTHO05D008890 3.0e-27 125.9 159 41.5
Sed0004969 Sechium edule HOM05D001304 ORTHO05D008890 3.0e-27 125.9 156 42.3
CBR_g28672 Chara braunii HOM05D001304 ORTHO05D008890 4.0e-27 125.6 161 36.0
Gohir.D04G181000 Gossypium hirsutum HOM05D001304 ORTHO05D008890 4.0e-27 125.6 158 41.8
Potri.010G053600 Populus trichocarpa HOM05D001304 ORTHO05D008890 4.0e-27 125.6 158 42.4
TWI36G0586 Tripterygium wilfordii HOM05D001304 ORTHO05D008890 8.8e-27 124.4 158 41.1
Cfa009288 Carpinus fangiana HOM05D001304 ORTHO05D008890 1.2e-26 124.0 167 40.1
Lj6g0017703 Lotus japonicus HOM05D001304 ORTHO05D008890 1.2e-26 124.0 146 42.5
arahy.Tifrunner.gnm1.ann1.VHC2JK Arachis hypogaea HOM05D001304 ORTHO05D008890 1.5e-26 123.6 164 40.9
Gorai.012G174200 Gossypium raimondii HOM05D001304 ORTHO05D008890 2.0e-26 123.2 132 44.7
Medtr3g086040 Medicago truncatula HOM05D001304 ORTHO05D008890 2.0e-26 123.2 130 47.7
Gohir.A04G137800 Gossypium hirsutum HOM05D001304 ORTHO05D008890 2.6e-26 122.9 132 44.7
Aqoxy5G03572 Aquilegia oxysepala HOM05D001304 ORTHO05D008890 4.4e-26 122.1 163 39.9
Duzib251G0230 Durio zibethinus HOM05D001304 ORTHO05D008890 4.4e-26 122.1 130 46.2
BolC6t39193H Brassica oleracea HOM05D001304 ORTHO05D007800 5.7e-26 121.7 197 37.1
MD13G1108600 Malus domestica HOM05D001304 ORTHO05D008890 5.7e-26 121.7 166 38.0
Thecc.02G270700 Theobroma cacao HOM05D001304 ORTHO05D008890 5.7e-26 121.7 135 43.7
Lj6C819T3 Lonicera japonica HOM05D001304 ORTHO05D008890 9.8e-26 120.9 157 43.3
Lalb_Chr08g0230761 Lupinus albus HOM05D001304 ORTHO05D008890 9.8e-26 120.9 132 43.9
CDE04G1632 Ceratophyllum demersum HOM05D001304 ORTHO05D008890 8.3e-25 117.9 170 34.1
Nitab4.5_0001318g0090 Nicotiana tabacum HOM05D001304 ORTHO05D008890 8.3e-25 117.9 160 41.9
TPR.G33410 Trifolium pratense HOM05D001304 ORTHO05D008890 8.3e-25 117.9 130 43.8
PSO063G7645 Papaver somniferum HOM05D001304 ORTHO05D008890 3.1e-24 115.9 166 36.1
PSO782G0777 Papaver somniferum HOM05D001304 ORTHO05D008890 9.2e-24 114.4 166 35.5
vmacro16148 Vaccinium macrocarpon HOM05D001304 ORTHO05D008890 4.3e-21 105.5 110 44.5
GSVIVG01010306001 Vitis vinifera HOM05D001304 ORTHO05D008890 5.6e-21 105.1 111 43.2
CSS0032412 Camellia sinensis var. sinensis HOM05D000063 ORTHO05D008721 1.2e-20 104.0 110 43.6
Psat5g093920 Pisum sativum HOM05D001304 ORTHO05D008890 2.1e-20 103.2 97 48.5
TAR629G1650 Trochodendron aralioides HOM05D001304 ORTHO05D008890 2.1e-20 103.2 110 42.7
PRCOL_00000361 Prasinoderma coloniale HOM05D001304 ORTHO05D008890 2.6e-18 96.3 124 36.3
Actinidia24567 Actinidia chinensis HOM05D001304 ORTHO05D008890 5.7e-18 95.1 160 36.2
Lsat_1_v5_gn_8_150960 Lactuca sativa HOM05D001304 ORTHO05D008890 2.2e-17 93.2 160 34.4
MCO01G115 Micromonas commoda HOM05D001304 ORTHO05D008890 2.9e-17 92.8 172 31.4
Cpa.g.c30628.2 Carica papaya HOM05D001304 ORTHO05D008890 9.2e-16 87.8 158 34.2
Hma1.2p1_0079F.1_g041530 Hydrangea macrophylla HOM05D001304 ORTHO05D008890 5.9e-15 85.1 100 45.0
BolC6t38945H Brassica oleracea HOM05D001304 ORTHO05D008890 1.9e-13 80.1 95 41.1
MELO3C010716.2 Cucumis melo HOM05D001304 ORTHO05D008890 2.5e-13 79.7 96 42.7
DCAR_026486 Daucus carota HOM05D000468 ORTHO05D008890 1.6e-07 60.5 110 32.7
Cfa021197 Carpinus fangiana HOM05D001304 ORTHO05D008890 6.0e-07 58.5 116 30.2
MBI06_g05241_MAGBIO Magnolia biondii HOM05D001304 ORTHO05D008890 1.7e-06 57.0 75 36.0


User provided reference genes

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